RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 SCGB2A2Q13296 93 aa8□□□□□ -1.13
SRP54-208ENST00000555557 PVRIGQ6DKI7 326 aa8□□□□□ -1.13
SRP54-208ENST00000555557 ALKAL2Q6UX46 152 aa8□□□□□ -1.13
SRP54-208ENST00000555557 BAP18Q8IXM2 172 aa8□□□□□ -1.13
SRP54-208ENST00000555557 RNASEH2CQ8TDP1 164 aaKnown RBP8□□□□□ -1.13
SRP54-208ENST00000555557 CXorf58Q96LI9 332 aa8□□□□□ -1.13
SRP54-208ENST00000555557 MS4A10Q96PG2 267 aa8□□□□□ -1.13
SRP54-208ENST00000555557 TMEM147Q9BVK8 224 aa8□□□□□ -1.13
SRP54-208ENST00000555557 NPFFR1Q9GZQ6 430 aa8□□□□□ -1.13
SRP54-208ENST00000555557 ZNF702PQ9H963 129 aa8□□□□□ -1.13
SRP54-208ENST00000555557 MRPL36Q9P0J6 103 aaKnown RBP8□□□□□ -1.13
SRP54-208ENST00000555557 S4R3C0 116 aa8□□□□□ -1.13
SRP54-208ENST00000555557 BORCS7-ASMTA0A0B4J1R7 106 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 OR2J3O76001 311 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 MT-CO2P00403 227 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 GAMTQ14353 236 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 ZNF266Q14584 549 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 ATP6V1FQ16864 119 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 C19orf54Q5BKX5 351 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 UBAC2Q8NBM4 344 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 FAM110DQ8TAY7 271 aaPredicted RBP7.99□□□□□ -1.13
SRP54-208ENST00000555557 ZNF418Q8TF45 676 aaPredicted RBP7.99□□□□□ -1.13
SRP54-208ENST00000555557 ACY3Q96HD9 319 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 PRSS22Q9GZN4 317 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 SH3BGRL3Q9H299 93 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 BIN3Q9NQY0 253 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 MLXQ9UH92 298 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 IGLV11-55A0A075B6I3 123 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 I3L2K1 104 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 AP4M1O00189 453 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 IFNA5P01569 189 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 H2AFB1P0C5Y9 115 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 TPT1P13693 172 aaKnown RBP7.99□□□□□ -1.13
SRP54-208ENST00000555557 MEOX2P50222 304 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 CRIP2P52943 208 aaPredicted RBP7.99□□□□□ -1.13
SRP54-208ENST00000555557 UBA52P62987 128 aaKnown RBP7.99□□□□□ -1.13
SRP54-208ENST00000555557 DLK1P80370 383 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 SRSF2Q01130 221 aaKnown RBP7.99□□□□□ -1.13
SRP54-208ENST00000555557 AKR1C1Q04828 323 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 VWC2Q2TAL6 325 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 TREML4Q6UXN2 200 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 SLC16A13Q7RTY0 426 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 ZNF329Q86UD4 541 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 STOML3Q8TAV4 291 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 RSG1Q9BU20 258 aa7.99□□□□□ -1.13
SRP54-208ENST00000555557 WDR61Q9GZS3 305 aaKnown RBP7.99□□□□□ -1.13
SRP54-208ENST00000555557 K7EIM0 57 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 CRLF1O75462 422 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 NDUFB8O95169 186 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 IGHV3-23P01764 117 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 APOC3P02656 99 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 S100A6P06703 90 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 FGF7P21781 194 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 ATP6V0CP27449 155 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 PPIFP30405 207 aaKnown RBP7.98□□□□□ -1.13
SRP54-208ENST00000555557 HILS1P60008 231 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 FAM74A1Q5RGS3 127 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 C10orf99Q6UWK7 81 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 BTNL8Q6UX41 500 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 SCGB1C1Q8TD33 95 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 TMED6Q8WW62 240 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 NPIPB3Q92617 1050 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 TMEM68Q96MH6 324 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 GGACTQ9BVM4 153 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 ARV1Q9H2C2 271 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 SLC25A32Q9H2D1 315 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 PLA2G2EQ9NZK7 142 aa7.98□□□□□ -1.13
SRP54-208ENST00000555557 NSD1Q96L73 2696 aaPredicted RBP7.98□□□□□ -1.13
SRP54-208ENST00000555557 IGKV1OR2-108A0A075B7D4 117 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 CORTO00230 105 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 FAM157CP0CG43 387 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 MDKP21741 143 aaPredicted RBP7.97□□□□□ -1.13
SRP54-208ENST00000555557 GPX4P36969 197 aaPredicted RBP7.97□□□□□ -1.13
SRP54-208ENST00000555557 ZNF600Q6ZNG1 722 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 LCNL1Q6ZST4 164 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 CACNG8Q8WXS5 425 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 GINS3Q9BRX5 216 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 NPVFQ9HCQ7 196 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 FBXL7Q9UJT9 491 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 WDR83OSQ9Y284 106 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 CLDN34H7C241 214 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 SCAF4O95104 1147 aaKnown RBP7.97□□□□□ -1.13
SRP54-208ENST00000555557 RNASE1P07998 156 aaKnown RBP7.97□□□□□ -1.13
SRP54-208ENST00000555557 RND2P52198 227 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 RHOGP84095 191 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 ATRAIDQ6UW56 229 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 Q6ZSV7 163 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 OR1L6Q8NGR2 347 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 SLC35E1Q96K37 410 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 MGST2Q99735 147 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 NKX6-2Q9C056 277 aaPredicted RBP7.97□□□□□ -1.13
SRP54-208ENST00000555557 KLK15Q9H2R5 256 aa7.97□□□□□ -1.13
SRP54-208ENST00000555557 TRBV9A0A0B4J1U6 114 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 SNAPINO95295 136 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 SPP1P10451 314 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 RIPPLY3P57055 190 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 EIF5AP63241 154 aaKnown RBP7.96□□□□□ -1.13
SRP54-208ENST00000555557 CFHR3Q02985 330 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 C15orf32Q32M92 178 aa7.96□□□□□ -1.13
SRP54-208ENST00000555557 ETFRF1Q6IPR1 90 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms