RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 GDF15Q99988 308 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 REG4Q9BYZ8 158 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 WDR83OSQ9Y284 106 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 TRAV1-1A0A0B4J248 108 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 NDUFS8O00217 210 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 CELA3BP08861 270 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 CNTFRP26992 372 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 MORN2Q502X0 79 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 OR10J3Q5JRS4 329 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 GNB1LQ9BYB4 327 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 FBXL7Q9UJT9 491 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 RAMP3O60896 148 aa11.65□□□□□ -0.54
VTI1B-204ENST00000554659 MST1P26927 711 aa11.65□□□□□ -0.54
VTI1B-204ENST00000554659 FAM27E3Q08E93 113 aa11.65□□□□□ -0.54
VTI1B-204ENST00000554659 CRIPAKQ8N1N5 446 aa11.65□□□□□ -0.54
VTI1B-204ENST00000554659 SSBP4Q9BWG4 385 aaPredicted RBP11.65□□□□□ -0.54
VTI1B-204ENST00000554659 C11orf68Q9H3H3 251 aaKnown RBP11.65□□□□□ -0.54
VTI1B-204ENST00000554659 LEPP41159 167 aa11.65□□□□□ -0.54
VTI1B-204ENST00000554659 LOC285556D6RIA3 1793 aa11.65□□□□□ -0.54
VTI1B-204ENST00000554659 NAPSAO96009 420 aa11.65□□□□□ -0.54
VTI1B-204ENST00000554659 IGHV4-39P01824 125 aa11.65□□□□□ -0.54
VTI1B-204ENST00000554659 CD55P08174 381 aa11.65□□□□□ -0.54
VTI1B-204ENST00000554659 SUPT4H1P63272 117 aaKnown RBP11.65□□□□□ -0.54
VTI1B-204ENST00000554659 HIST1H2BLQ99880 126 aa11.65□□□□□ -0.54
VTI1B-204ENST00000554659 VKORC1Q9BQB6 163 aa11.65□□□□□ -0.54
VTI1B-204ENST00000554659 GLRX5Q86SX6 157 aa11.65□□□□□ -0.54
VTI1B-204ENST00000554659 LCTP09848 1927 aa11.65□□□□□ -0.55
VTI1B-204ENST00000554659 IGKV1D-33P01593 117 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 IGKV1-33P01594 117 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 PDLIM4P50479 330 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 IGHV3OR16-8A0A075B7F1 116 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 ARPC1AQ92747 370 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 SIGMAR1Q99720 223 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 SEMA5BQ9P283 1151 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 IGHV3OR16-10A0A075B7F0 116 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 TRGV3P03979 118 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 CEACAM1P13688 526 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 ZNF124Q15973 351 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 TEX38Q6PEX7 206 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 HIST3H2BBQ8N257 126 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 TRAV9-2A0A087WT02 112 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 TDRD6O60522 2096 aaKnown RBP11.64□□□□□ -0.55
VTI1B-204ENST00000554659 DOCK4Q8N1I0 1966 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 ABCA1O95477 2261 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 PAX2Q02962 417 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 OCC1Q8TAD7 63 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 EPDR1Q9UM22 224 aa11.64□□□□□ -0.55
VTI1B-204ENST00000554659 RBMY1BA6NDE4 496 aaKnown RBP11.63□□□□□ -0.55
VTI1B-204ENST00000554659 RBMY1EA6NEQ0 496 aaKnown RBP11.63□□□□□ -0.55
VTI1B-204ENST00000554659 PRR19A6NJB7 356 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 RBMY1DP0C7P1 496 aaKnown RBP11.63□□□□□ -0.55
VTI1B-204ENST00000554659 RBMY1A1P0DJD3 496 aaKnown RBP11.63□□□□□ -0.55
VTI1B-204ENST00000554659 RBMY1CP0DJD4 496 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 EFNB3Q15768 340 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 ZNF585BQ52M93 769 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 FAM166AQ6J272 317 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 SCN2AQ99250 2005 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 EFEMP2O95967 443 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 PRCDQ00LT1 54 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 GFI1BQ5VTD9 330 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 CENPVQ7Z7K6 275 aaPredicted RBP11.63□□□□□ -0.55
VTI1B-204ENST00000554659 OR4X2Q8NGF9 303 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 IGKV1-12A0A0C4DH73 117 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 TCRBV4S1A1TA0A5B7 111 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 C17orf100A8MU93 164 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 IGKV1D-12P01611 117 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 DUTP33316 252 aaKnown RBP11.63□□□□□ -0.55
VTI1B-204ENST00000554659 PVRIGQ6DKI7 326 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 JMJD8Q96S16 334 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 CD69Q07108 199 aa11.63□□□□□ -0.55
VTI1B-204ENST00000554659 CHD5Q8TDI0 1954 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 IGKV3D-20A0A0C4DH25 116 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 BSPH1Q075Z2 132 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 PPP1R27Q86WC6 154 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 VSIRQ9H7M9 311 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 DOCK3Q8IZD9 2030 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 FAM71F2Q6NXP2 309 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 OR2K2Q8NGT1 345 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 NEU4Q8WWR8 484 aaPredicted RBP11.62□□□□□ -0.55
VTI1B-204ENST00000554659 CXCL1P09341 107 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 SRSF4Q08170 494 aaKnown RBP11.62□□□□□ -0.55
VTI1B-204ENST00000554659 FAM57AQ8TBR7 257 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 ZNF815PA8K554 130 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 OR9G9P0C7N8 305 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 GNG5P63218 68 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 C9orf106Q8NAJ2 232 aa11.62□□□□□ -0.55
VTI1B-204ENST00000554659 COX6B1P14854 86 aa11.61□□□□□ -0.55
VTI1B-204ENST00000554659 LINC01560Q8TB33 94 aa11.61□□□□□ -0.55
VTI1B-204ENST00000554659 EP300Q09472 2414 aaPredicted RBP11.61□□□□□ -0.55
VTI1B-204ENST00000554659 ORAOV1Q8WV07 137 aa11.61□□□□□ -0.55
VTI1B-204ENST00000554659 NABP1Q96AH0 204 aa11.61□□□□□ -0.55
VTI1B-204ENST00000554659 NUTF2P61970 127 aaKnown RBP11.61□□□□□ -0.55
VTI1B-204ENST00000554659 ZIC4Q8N9L1 334 aa11.61□□□□□ -0.55
VTI1B-204ENST00000554659 COQ2Q96H96 371 aa11.61□□□□□ -0.55
VTI1B-204ENST00000554659 DUX3Q96PT4 197 aa11.61□□□□□ -0.55
VTI1B-204ENST00000554659 GVINP1Q7Z2Y8 2422 aa11.61□□□□□ -0.55
VTI1B-204ENST00000554659 A6NNC1 897 aa11.61□□□□□ -0.55
VTI1B-204ENST00000554659 A0A0G2JLM5 398 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 ATP5L2Q7Z4Y8 100 aa11.6□□□□□ -0.55
VTI1B-204ENST00000554659 CHCHD1Q96BP2 118 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms