RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 TSPOP30536 169 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 CDKN2AP42771 156 aaKnown RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 SELENOPP49908 381 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 POLR2HP52434 150 aaKnown RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 SUB1P53999 127 aaKnown RBP eCLIP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 KRTAP10-2P60368 255 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 GABARAPL2P60520 117 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 SUMO2P61956 95 aaKnown RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 HIST1H3AP68431 136 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 H3F3AP84243 136 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 DHRS2Q13268 280 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF726P1Q15940 193 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 IZUMO4Q1ZYL8 232 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 KIAA1644Q3SXP7 199 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 KHDC3LQ587J8 217 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 SPSB3Q6PJ21 355 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 GDPGP1Q6ZNW5 385 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 HIST2H3AQ71DI3 136 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 COMMD6Q7Z4G1 85 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 LRP11Q86VZ4 500 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 C15orf54Q8N8G6 183 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 OR5AP2Q8NGF4 316 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 OR5A2Q8NGI9 324 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 SRSF12Q8WXF0 261 aaKnown RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 PRADC1Q9BSG0 188 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 EMC6Q9BV81 110 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 PARP12Q9H0J9 701 aaKnown RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 FXYD6Q9H0Q3 95 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 ING1Q9UK53 422 aaPredicted RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 MCTS1Q9ULC4 181 aaKnown RBP2.18□□□□□ -2.06
PRPF39-206ENST00000554429 KCNE3Q9Y6H6 103 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 ZFHX3Q15911 3703 aa2.18□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM269A0A1B0GVZ9 245 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 A0A1B0GX51 115 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 C7orf71A4D174 169 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 DPRXA6NFQ7 191 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 H7C1C5 153 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 J3QLW9 94 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 AGPAT2O15120 278 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 OR2T1O43869 369 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 PGLYRP1O75594 196 aaPredicted RBP2.17□□□□□ -2.06
PRPF39-206ENST00000554429 OR2H2O95918 312 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 OR4A8P0C604 315 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 FAM106CPP0CH98 169 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 SMIM17P0DL12 118 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 FABP4P15090 132 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF19P17023 458 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 EVI2AP22794 236 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 ETV6P41212 452 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 GNG4P50150 75 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 NDUFA6P56556 154 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 OR12D2P58182 307 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 LCN6P62502 163 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 CX3CL1P78423 397 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 TNFAIP6P98066 277 aaPredicted RBP2.17□□□□□ -2.06
PRPF39-206ENST00000554429 MEF2DQ14814 521 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM241Q24JQ0 296 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 FAM106AQ4KMX7 169 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM255AQ5JRV8 349 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 LYRM7Q5U5X0 104 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 LEG1Q6P5S2 330 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 UNQ5815/PRO19632Q6UWF5 114 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 Q6ZTK2 550 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 MOB1BQ7L9L4 216 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 SERPINA11Q86U17 422 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 PPP1R27Q86WC6 154 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 TEX29Q8N6K0 151 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 STPG4Q8N801 248 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 LINC00482Q8N8I6 264 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM229BQ8NBD8 167 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.17□□□□□ -2.06
PRPF39-206ENST00000554429 SGMS2Q8NHU3 365 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF519Q8TB69 540 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 PP6455Q8WZ26 134 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 DERL3Q96Q80 235 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 KIR2DL4Q99706 377 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 SPATA25Q9BR10 227 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 NIPSNAP3BQ9BS92 247 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF586Q9NXT0 402 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 OR5AC2Q9NZP5 309 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 ACANP16112 2415 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 NIPBLQ6KC79 2804 aaeCLIP2.17□□□□□ -2.06
PRPF39-206ENST00000554429 TANC2Q9HCD6 1990 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 ABCA4P78363 2273 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 FBN1P35555 2871 aaKnown RBP2.17□□□□□ -2.06
PRPF39-206ENST00000554429 TRAV27A0A087WT01 109 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 TRBV5-3A0A0A0MS03 114 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 BORCS7-ASMTA0A0B4J1R7 106 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 MEGF11A6BM72 1044 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 RBFOX3A6NFN3 312 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 IFITM5A6NNB3 132 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 FAM220BPB1ANY3 271 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 NDUFB4O95168 129 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 PGA4P0DJD7 388 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 PGA3P0DJD8 388 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 PGA5P0DJD9 388 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 GNB3P16520 340 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 BCL3P20749 454 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 CTRLP40313 264 aa2.17□□□□□ -2.06
PRPF39-206ENST00000554429 EFNA4P52798 201 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms