RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 LGALS14Q8TCE9 139 aa9.83□□□□□ -0.84
NEDD1-206ENST00000554226 PINX1Q96BK5 328 aaKnown RBP9.83□□□□□ -0.84
NEDD1-206ENST00000554226 METTL26Q96S19 204 aa9.83□□□□□ -0.84
NEDD1-206ENST00000554226 DKK2Q9UBU2 259 aa9.83□□□□□ -0.84
NEDD1-206ENST00000554226 DAPK2Q9UIK4 370 aa9.83□□□□□ -0.84
NEDD1-206ENST00000554226 U3KQE9 123 aa9.83□□□□□ -0.84
NEDD1-206ENST00000554226 HELTA6NFD8 242 aa9.82□□□□□ -0.84
NEDD1-206ENST00000554226 H3BMM0 161 aa9.82□□□□□ -0.84
NEDD1-206ENST00000554226 CBX5P45973 191 aa9.82□□□□□ -0.84
NEDD1-206ENST00000554226 EIF2B2P49770 351 aaKnown RBP9.82□□□□□ -0.84
NEDD1-206ENST00000554226 HSPE1P61604 102 aaKnown RBP9.82□□□□□ -0.84
NEDD1-206ENST00000554226 CMTM1Q8IZ96 169 aa9.82□□□□□ -0.84
NEDD1-206ENST00000554226 SLC25A38Q96DW6 304 aa9.82□□□□□ -0.84
NEDD1-206ENST00000554226 SEC22AQ96IW7 307 aa9.82□□□□□ -0.84
NEDD1-206ENST00000554226 XCL2Q9UBD3 114 aa9.82□□□□□ -0.84
NEDD1-206ENST00000554226 TRAV18A0A075B6X5 111 aa9.81□□□□□ -0.84
NEDD1-206ENST00000554226 CORTO00230 105 aa9.81□□□□□ -0.84
NEDD1-206ENST00000554226 AP2S1P53680 142 aaPredicted RBP9.81□□□□□ -0.84
NEDD1-206ENST00000554226 ERHP84090 104 aaKnown RBP9.81□□□□□ -0.84
NEDD1-206ENST00000554226 PSMG4Q5JS54 123 aa9.81□□□□□ -0.84
NEDD1-206ENST00000554226 SFXN4Q6P4A7 337 aa9.81□□□□□ -0.84
NEDD1-206ENST00000554226 TSPAN14Q8NG11 270 aa9.81□□□□□ -0.84
NEDD1-206ENST00000554226 NARS2Q96I59 477 aaKnown RBP9.81□□□□□ -0.84
NEDD1-206ENST00000554226 NIPSNAP3BQ9BS92 247 aa9.81□□□□□ -0.84
NEDD1-206ENST00000554226 AUNIPQ9H7T9 357 aa9.81□□□□□ -0.84
NEDD1-206ENST00000554226 SMIM30A4D0T7 59 aa9.8□□□□□ -0.84
NEDD1-206ENST00000554226 CLN5O75503 358 aa9.8□□□□□ -0.84
NEDD1-206ENST00000554226 DHRS2Q13268 280 aa9.8□□□□□ -0.84
NEDD1-206ENST00000554226 C6orf223Q8N319 242 aa9.8□□□□□ -0.84
NEDD1-206ENST00000554226 OR4A16Q8NH70 328 aa9.8□□□□□ -0.84
NEDD1-206ENST00000554226 GLMPQ8WWB7 406 aa9.8□□□□□ -0.84
NEDD1-206ENST00000554226 CLUHP3Q96NS8 147 aa9.8□□□□□ -0.84
NEDD1-206ENST00000554226 ANAPC10Q9UM13 185 aa9.8□□□□□ -0.84
NEDD1-206ENST00000554226 RFNGQ9Y644 331 aa9.8□□□□□ -0.84
NEDD1-206ENST00000554226 NBDYA0A0U1RRE5 68 aa9.79□□□□□ -0.84
NEDD1-206ENST00000554226 FAM90A26D6RGX4 464 aa9.79□□□□□ -0.84
NEDD1-206ENST00000554226 GPR31O00270 319 aa9.79□□□□□ -0.84
NEDD1-206ENST00000554226 IGKV1-17P01599 117 aa9.79□□□□□ -0.84
NEDD1-206ENST00000554226 HLA-DRB4P13762 266 aa9.79□□□□□ -0.84
NEDD1-206ENST00000554226 HOXA1P49639 335 aaPredicted RBP9.79□□□□□ -0.84
NEDD1-206ENST00000554226 SNRPD3P62318 126 aaKnown RBP9.79□□□□□ -0.84
NEDD1-206ENST00000554226 FAM222AQ5U5X8 452 aa9.79□□□□□ -0.84
NEDD1-206ENST00000554226 C16orf54Q6UWD8 224 aa9.79□□□□□ -0.84
NEDD1-206ENST00000554226 C15orf53Q8NAA6 179 aa9.79□□□□□ -0.84
NEDD1-206ENST00000554226 OR4X1Q8NH49 305 aa9.79□□□□□ -0.84
NEDD1-206ENST00000554226 ZNF2Q9BSG1 426 aaPredicted RBP9.79□□□□□ -0.84
NEDD1-206ENST00000554226 TXNL4BQ9NX01 149 aaKnown RBP9.79□□□□□ -0.84
NEDD1-206ENST00000554226 EHFQ9NZC4 300 aa9.79□□□□□ -0.84
NEDD1-206ENST00000554226 HLA-DRB4X5D2U9 266 aa9.79□□□□□ -0.84
NEDD1-206ENST00000554226 SCGB2A1O75556 95 aa9.78□□□□□ -0.84
NEDD1-206ENST00000554226 IGKV1-39P01597 117 aa9.78□□□□□ -0.84
NEDD1-206ENST00000554226 IGKV1D-39P04432 117 aa9.78□□□□□ -0.84
NEDD1-206ENST00000554226 RPL5P46777 297 aaKnown RBP9.78□□□□□ -0.84
NEDD1-206ENST00000554226 ALDH3B2P48448 385 aa9.78□□□□□ -0.84
NEDD1-206ENST00000554226 PPP5CP53041 499 aa9.78□□□□□ -0.84
NEDD1-206ENST00000554226 TMEM88Q6PEY1 159 aa9.78□□□□□ -0.84
NEDD1-206ENST00000554226 H2BFWTQ7Z2G1 175 aa9.78□□□□□ -0.84
NEDD1-206ENST00000554226 ZNRF2Q8NHG8 242 aa9.78□□□□□ -0.84
NEDD1-206ENST00000554226 YTHDF1Q9BYJ9 559 aaKnown RBP9.78□□□□□ -0.84
NEDD1-206ENST00000554226 FXYD6Q9H0Q3 95 aa9.78□□□□□ -0.84
NEDD1-206ENST00000554226 MRPL36Q9P0J6 103 aaKnown RBP9.78□□□□□ -0.84
NEDD1-206ENST00000554226 RRP15Q9Y3B9 282 aaKnown RBP9.78□□□□□ -0.84
NEDD1-206ENST00000554226 TRAV30A0A087WSZ9 112 aa9.77□□□□□ -0.85
NEDD1-206ENST00000554226 NAT1P18440 290 aa9.77□□□□□ -0.85
NEDD1-206ENST00000554226 SNCAP37840 140 aa9.77□□□□□ -0.85
NEDD1-206ENST00000554226 NKX2-1P43699 371 aaPredicted RBP9.77□□□□□ -0.85
NEDD1-206ENST00000554226 OR5H6Q8NGV6 325 aa9.77□□□□□ -0.85
NEDD1-206ENST00000554226 FNDC4Q9H6D8 234 aaPredicted RBP9.77□□□□□ -0.85
NEDD1-206ENST00000554226 NRN1Q9NPD7 142 aa9.77□□□□□ -0.85
NEDD1-206ENST00000554226 TMED3Q9Y3Q3 217 aa9.77□□□□□ -0.85
NEDD1-206ENST00000554226 RNASE2P10153 161 aaKnown RBP9.76□□□□□ -0.85
NEDD1-206ENST00000554226 RFX2P48378 723 aa9.76□□□□□ -0.85
NEDD1-206ENST00000554226 SUB1P53999 127 aaKnown RBP eCLIP9.76□□□□□ -0.85
NEDD1-206ENST00000554226 EMP1P54849 157 aa9.76□□□□□ -0.85
NEDD1-206ENST00000554226 TAS2R46P59540 309 aa9.76□□□□□ -0.85
NEDD1-206ENST00000554226 BSXQ3C1V8 233 aa9.76□□□□□ -0.85
NEDD1-206ENST00000554226 TMEM230Q96A57 120 aa9.76□□□□□ -0.85
NEDD1-206ENST00000554226 DIABLOQ9NR28 239 aa9.76□□□□□ -0.85
NEDD1-206ENST00000554226 EPM2AB3EWF7 344 aa9.75□□□□□ -0.85
NEDD1-206ENST00000554226 TMEM127O75204 238 aa9.75□□□□□ -0.85
NEDD1-206ENST00000554226 FCER2P06734 321 aa9.75□□□□□ -0.85
NEDD1-206ENST00000554226 HNRNPCP07910 306 aaKnown RBP eCLIP9.75□□□□□ -0.85
NEDD1-206ENST00000554226 P0C879 139 aa9.75□□□□□ -0.85
NEDD1-206ENST00000554226 AQP4P55087 323 aa9.75□□□□□ -0.85
NEDD1-206ENST00000554226 LPCAT3Q6P1A2 487 aa9.75□□□□□ -0.85
NEDD1-206ENST00000554226 ZNF709Q8N972 641 aa9.75□□□□□ -0.85
NEDD1-206ENST00000554226 OR6F1Q8NGZ6 308 aa9.75□□□□□ -0.85
NEDD1-206ENST00000554226 MRGPRFQ96AM1 343 aa9.75□□□□□ -0.85
NEDD1-206ENST00000554226 EBAG9O00559 213 aa9.74□□□□□ -0.85
NEDD1-206ENST00000554226 BUB3O43684 328 aa9.74□□□□□ -0.85
NEDD1-206ENST00000554226 IGLC1P0CG04 106 aa9.74□□□□□ -0.85
NEDD1-206ENST00000554226 S100GP29377 79 aa9.74□□□□□ -0.85
NEDD1-206ENST00000554226 YPEL3P61236 119 aaPredicted RBP9.74□□□□□ -0.85
NEDD1-206ENST00000554226 SPATA12Q7Z6I5 190 aa9.74□□□□□ -0.85
NEDD1-206ENST00000554226 TBC1D26Q86UD7 250 aa9.74□□□□□ -0.85
NEDD1-206ENST00000554226 IFT46Q9NQC8 304 aa9.74□□□□□ -0.85
NEDD1-206ENST00000554226 BLOC1S6Q9UL45 172 aa9.74□□□□□ -0.85
NEDD1-206ENST00000554226 YTHDF2Q9Y5A9 579 aaKnown RBP9.74□□□□□ -0.85
NEDD1-206ENST00000554226 INAFM2P0DMQ5 153 aa9.73□□□□□ -0.85
NEDD1-206ENST00000554226 HTN3P15516 51 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 354.5 ms