RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ERHP84090 104 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 PLGLAQ15195 96 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 SPATA31B1PQ5VZV4 182 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 TEPPQ6URK8 271 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 PPP1R27Q86WC6 154 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 TEX45Q8NA69 505 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 ACY3Q96HD9 319 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 GGACTQ9BVM4 153 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 SLC35B3Q9H1N7 401 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 ZANQ9Y493 2812 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 TRAV1-1A0A0B4J248 108 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 LOC102723971A0A1B0GUV8 181 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 SOX15O60248 233 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 SRP19P09132 144 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 STPG3Q8N7X2 389 aa10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 FAM103A1Q9BTL3 118 aaKnown RBP10.18□□□□□ -0.78
VIPAS39-206ENST00000553888 ACTL6BO94805 426 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 RPL27AP46776 148 aaKnown RBP10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 ZNF506Q5JVG8 444 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 KPTNQ9Y664 436 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 DOPEY2Q9Y3R5 2298 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 CTXND1A0A1B0GTU2 59 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 TMEM238C9JI98 176 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 OPRK1P41145 380 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 COMPP49747 757 aaPredicted RBP10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 MMD2Q8IY49 270 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 C10orf105Q8TEF2 133 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 EAF1Q96JC9 268 aaPredicted RBP10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 BCL2P10415 239 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 CD69Q07108 199 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 ACOT6Q3I5F7 207 aaPredicted RBP10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 FAM120AOSQ5T036 256 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 KIR3DL3Q8N743 410 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 CLRN3Q8NCR9 226 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 AJUBAQ96IF1 538 aa10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 ACTR3CQ9C0K3 210 aaPredicted RBP10.17□□□□□ -0.78
VIPAS39-206ENST00000553888 TEX22C9J3V5 150 aa10.16□□□□□ -0.78
VIPAS39-206ENST00000553888 OR10J1P30954 320 aa10.16□□□□□ -0.78
VIPAS39-206ENST00000553888 CEACAM3P40198 252 aa10.16□□□□□ -0.78
VIPAS39-206ENST00000553888 MISP3Q96FF7 219 aa10.16□□□□□ -0.78
VIPAS39-206ENST00000553888 PIMREGQ9BSJ6 248 aa10.16□□□□□ -0.78
VIPAS39-206ENST00000553888 SEPSECSQ9HD40 501 aaKnown RBP10.16□□□□□ -0.78
VIPAS39-206ENST00000553888 PUS1Q9Y606 427 aaKnown RBP eCLIP10.16□□□□□ -0.78
VIPAS39-206ENST00000553888 KRTAP10-9P60411 292 aa10.16□□□□□ -0.78
VIPAS39-206ENST00000553888 ABHD5Q8WTS1 349 aa10.16□□□□□ -0.78
VIPAS39-206ENST00000553888 SRSF12Q8WXF0 261 aaKnown RBP10.16□□□□□ -0.78
VIPAS39-206ENST00000553888 ATP6V0BQ99437 205 aa10.16□□□□□ -0.78
VIPAS39-206ENST00000553888 UNKLQ9H9P5 680 aaKnown RBP10.16□□□□□ -0.78
VIPAS39-206ENST00000553888 MPDU1O75352 247 aa10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 LINC00869P0C866 280 aa10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 AWAT1Q58HT5 328 aa10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 SOHLH1Q5JUK2 328 aa10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 PIP4P2Q8N4L2 257 aa10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 M0R036 132 aa10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 NBR2O15453 112 aa10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 MOSP00540 346 aa10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 SAA4P35542 130 aa10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 KIAA0141Q14154 515 aaPredicted RBP10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 TMEM144Q7Z5S9 345 aa10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 NPIPB3Q92617 1050 aa10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 SOX21Q9Y651 276 aaPredicted RBP10.15□□□□□ -0.78
VIPAS39-206ENST00000553888 CYB5BO43169 146 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 FOXH1O75593 365 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 GSX1Q9H4S2 264 aaPredicted RBP10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 SLC45A2Q9UMX9 530 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 A0A1W2PPV4 95 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 NCBP2LA6PVI3 153 aaKnown RBP10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 VWC2LB2RUY7 222 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 INS-IGF2F8WCM5 200 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 CNIH1O95406 144 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 COX6B1P14854 86 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 PRR20EP86478 221 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 PRR20CP86479 221 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 PRR20DP86480 221 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 PRR20BP86481 221 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 PRR20AP86496 221 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 ZNF90Q03938 601 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 KHDC3LQ587J8 217 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 ZNF469Q96JG9 3925 aaPredicted RBP10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.14□□□□□ -0.792e-6■■■■□ 24
VIPAS39-206ENST00000553888 CSPG4Q6UVK1 2322 aa10.14□□□□□ -0.79
VIPAS39-206ENST00000553888 PAGE4O60829 102 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 HSPB1P04792 205 aaKnown RBP10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 ARL14EPLP0DKL9 152 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 CD81P60033 236 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 C14orf144Q96I85 54 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 SLC25A33Q9BSK2 321 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 KMT2BQ9UMN6 2715 aaPredicted RBP10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 SEC14L6B5MCN3 397 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 CDKN1BP46527 198 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 BRD3OSQ6XYD6 125 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 MIR17HGQ75NE6 70 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 RPS10P5Q9NQ39 176 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 DOK5Q9P104 306 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 CENPVL3A0A0U1RRI6 287 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 UBE2CO00762 179 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 RPL29P47914 159 aaKnown RBP10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 RND2P52198 227 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 NDPQ00604 133 aa10.13□□□□□ -0.79
VIPAS39-206ENST00000553888 KLF17Q5JT82 389 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms