RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 NDUFB6O95139 128 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 OR2C1O95371 312 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 SFT2D2O95562 160 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 IFNA21P01568 189 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 TRBV12-3P01733 135 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 HTR2BP41595 481 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 NPBWR1P48145 328 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 RELQ04864 619 aaPredicted RBP6.38□□□□□ -1.39
PSEN1-209ENST00000553855 ZNF846Q147U1 533 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 SMCO1Q147U7 214 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 IZUMO4Q1ZYL8 232 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 KLK9Q2XQG4 91 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 SPINK9Q5DT21 86 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 LCN12Q6JVE5 192 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 MZT2BQ6NZ67 158 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 SPSB3Q6PJ21 355 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 GPHB5Q86YW7 130 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 ZNF114Q8NC26 417 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 DUSP18Q8NEJ0 188 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 ZNF502Q8TBZ5 544 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 TMEM230Q96A57 120 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 GPR146Q96CH1 333 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 BSCL2Q96G97 398 aaPredicted RBP6.38□□□□□ -1.39
PSEN1-209ENST00000553855 TXN2Q99757 166 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 PTTG2Q9NZH5 202 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 KLK9Q9UKQ9 250 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 UFC1Q9Y3C8 167 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 PLXNB1O43157 2135 aa6.38□□□□□ -1.39
PSEN1-209ENST00000553855 IGHV3-21A0A0B4J1V1 117 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 A0A1B0GU03 582 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 OR2T8A6NH00 312 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 INS-IGF2F8WCM5 200 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 J3KRW8 73 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 LGALS9O00182 355 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 LYRM1O43325 122 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 MED6O75586 246 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 YIF1AO95070 293 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 MT-CO2P00403 227 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 IFNA10P01566 189 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 HLA-AP01891 365 aaKnown RBP6.37□□□□□ -1.39
PSEN1-209ENST00000553855 P0C879 139 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 OPRK1P41145 380 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 KRTAP10-11P60412 298 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 RPP30P78346 268 aaKnown RBP6.37□□□□□ -1.39
PSEN1-209ENST00000553855 GTSCR1Q86UQ5 136 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 OR2K2Q8NGT1 345 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 LHFPL5Q8TAF8 219 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 SCARB1Q8WTV0 552 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 MARC2Q969Z3 335 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 ZC4H2Q9NQZ6 224 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 SIGLEC8Q9NYZ4 499 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 TECRQ9NZ01 308 aaKnown RBP6.37□□□□□ -1.39
PSEN1-209ENST00000553855 TMED3Q9Y3Q3 217 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 VWFP04275 2813 aa6.37□□□□□ -1.39
PSEN1-209ENST00000553855 A0A0G2JRQ6 117 aa6.36□□□□□ -1.39
PSEN1-209ENST00000553855 GP9P14770 177 aa6.36□□□□□ -1.39
PSEN1-209ENST00000553855 SPNP16150 400 aa6.36□□□□□ -1.39
PSEN1-209ENST00000553855 BMI1P35226 326 aa6.36□□□□□ -1.39
PSEN1-209ENST00000553855 SUPT4H1P63272 117 aaKnown RBP6.36□□□□□ -1.39
PSEN1-209ENST00000553855 PPP1R1AQ13522 171 aa6.36□□□□□ -1.39
PSEN1-209ENST00000553855 ETFRF1Q6IPR1 90 aa6.36□□□□□ -1.39
PSEN1-209ENST00000553855 LYZL2Q7Z4W2 148 aa6.36□□□□□ -1.39
PSEN1-209ENST00000553855 SLC24A4Q8NFF2 622 aa6.36□□□□□ -1.39
PSEN1-209ENST00000553855 DTD1Q8TEA8 209 aa6.36□□□□□ -1.39
PSEN1-209ENST00000553855 PRR25Q96S07 402 aa6.36□□□□□ -1.39
PSEN1-209ENST00000553855 C20orf24Q9BUV8 137 aa6.36□□□□□ -1.39
PSEN1-209ENST00000553855 SMAD5-AS1Q9Y6J3 95 aa6.36□□□□□ -1.39
PSEN1-209ENST00000553855 TGP01266 2768 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 TRAV30A0A087WSZ9 112 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 FAM240BA0A1B0GVZ2 78 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 WI2-2373I1.2A0A1W2PRP0 233 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 C9orf170A2RU37 121 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 C2orf70A6NJV1 201 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 K7EIL1 84 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 K7EIM0 57 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 WRBO00258 174 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 NDUFA4O00483 81 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 NXPH3O95157 252 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 IGLV1-51P01701 117 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 CSN3P07498 182 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 HOXB5P09067 269 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 OR4E1P0C645 316 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 SLC25A6P12236 298 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 FOLR2P14207 255 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 NPY1RP25929 384 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 ELLP55199 621 aaPredicted RBP6.35□□□□□ -1.39
PSEN1-209ENST00000553855 ATP5IP56385 69 aaPredicted RBP6.35□□□□□ -1.39
PSEN1-209ENST00000553855 RAB11AP62491 216 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 LAMTOR1Q6IAA8 161 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 Q6ZRM9 215 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 RBPMS2Q6ZRY4 209 aaKnown RBP6.35□□□□□ -1.39
PSEN1-209ENST00000553855 LYG2Q86SG7 212 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 CCDC28AQ8IWP9 274 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 LRTM2Q8N967 370 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 RNASEH2CQ8TDP1 164 aaKnown RBP6.35□□□□□ -1.39
PSEN1-209ENST00000553855 CIB3Q96Q77 187 aaPredicted RBP6.35□□□□□ -1.39
PSEN1-209ENST00000553855 SDHCQ99643 169 aaPredicted RBP6.35□□□□□ -1.39
PSEN1-209ENST00000553855 GINS3Q9BRX5 216 aa6.35□□□□□ -1.39
PSEN1-209ENST00000553855 MRPL27Q9P0M9 148 aaKnown RBP6.35□□□□□ -1.39
PSEN1-209ENST00000553855 PAIP2BQ9ULR5 123 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms