RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 CLUHP3Q96NS8 147 aa6.32□□□□□ -1.4
PRKCH-208ENST00000553846 ATG5Q9H1Y0 275 aa6.32□□□□□ -1.4
PRKCH-208ENST00000553846 SEPSECSQ9HD40 501 aaKnown RBP6.32□□□□□ -1.4
PRKCH-208ENST00000553846 FAT3Q8TDW7 4589 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 INS-IGF2F8WCM5 200 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 PGLYRP1O75594 196 aaPredicted RBP6.31□□□□□ -1.4
PRKCH-208ENST00000553846 KRASP01116 189 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 RLN1P04808 185 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 NPPCP23582 126 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 DEFB1P60022 68 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 ERVK-16P61578 105 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 NUTF2P61970 127 aaKnown RBP6.31□□□□□ -1.4
PRKCH-208ENST00000553846 DHRS2Q13268 280 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 AADACL3Q5VUY0 350 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 C16orf54Q6UWD8 224 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 HOGA1Q86XE5 327 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 Q9H3A6 140 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 FNDC4Q9H6D8 234 aaPredicted RBP6.31□□□□□ -1.4
PRKCH-208ENST00000553846 ACOT13Q9NPJ3 140 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 TMED3Q9Y3Q3 217 aa6.31□□□□□ -1.4
PRKCH-208ENST00000553846 YTHDF2Q9Y5A9 579 aaKnown RBP6.31□□□□□ -1.4
PRKCH-208ENST00000553846 A0A1W2PS18 150 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 A8MTW9 85 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 IGKV1-39P01597 117 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 IGKV1D-39P04432 117 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 LPAR6P43657 344 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 NPBWR1P48145 328 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 FXYD4P59646 89 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 GNG2P59768 71 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 ZNF79Q15937 498 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 TMEM17Q86X19 198 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 PINX1Q96BK5 328 aaKnown RBP6.3□□□□□ -1.4
PRKCH-208ENST00000553846 SEC22AQ96IW7 307 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 METTL26Q96S19 204 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 DUSP21Q9H596 190 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 C8orf4Q9NR00 106 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 FKBP11Q9NYL4 201 aa6.3□□□□□ -1.4
PRKCH-208ENST00000553846 LOC102723971A0A1B0GUV8 181 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 PLAC8L1A1L4L8 177 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 PTGES3LE9PB15 166 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 PDCD5O14737 125 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 CLN5O75503 358 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 SNAPC5O75971 98 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 RAB3BP20337 219 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 NKX2-1P43699 371 aaPredicted RBP6.29□□□□□ -1.4
PRKCH-208ENST00000553846 ARPC4P59998 168 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 BSXQ3C1V8 233 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 OR4X1Q8NH49 305 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 MOB3AQ96BX8 217 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 SLC25A38Q96DW6 304 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 ATG101Q9BSB4 218 aa6.29□□□□□ -1.4
PRKCH-208ENST00000553846 SOCS3O14543 225 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 P0C879 139 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 HSMCR30P0CW71 290 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 RNASE2P10153 161 aaKnown RBP6.28□□□□□ -1.4
PRKCH-208ENST00000553846 FUSP35637 526 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRKCH-208ENST00000553846 FXYD7P58549 80 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 KRTAP10-1P60331 282 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 DAD1P61803 113 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 USF2Q15853 346 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-208ENST00000553846 DHRS11Q6UWP2 260 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 LGALS14Q8TCE9 139 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 RNF141Q8WVD5 230 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 TSC22D3Q99576 134 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 MGLLQ99685 303 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 FXYD6Q9H0Q3 95 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 SLC35B3Q9H1N7 401 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 SAV1Q9H4B6 383 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-208ENST00000553846 NRN1Q9NPD7 142 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 FAM212BQ9NTI7 297 aaPredicted RBP6.28□□□□□ -1.4
PRKCH-208ENST00000553846 NDUFB11Q9NX14 153 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 PGPEP1Q9NXJ5 209 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 ANAPC10Q9UM13 185 aa6.28□□□□□ -1.4
PRKCH-208ENST00000553846 IGHV3OR16-12A0A075B7B8 117 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 SMIM30A4D0T7 59 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 CASQ2O14958 399 aaPredicted RBP6.27□□□□□ -1.41
PRKCH-208ENST00000553846 BUB3O43684 328 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 SCGNO76038 276 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 IGLC1P0CG04 106 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 HSPE1P61604 102 aaKnown RBP6.27□□□□□ -1.41
PRKCH-208ENST00000553846 SNRPD3P62318 126 aaKnown RBP6.27□□□□□ -1.41
PRKCH-208ENST00000553846 MLANAQ16655 118 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 TIGITQ495A1 244 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 SSX7Q7RTT5 188 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 OR5AP2Q8NGF4 316 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 FRZBQ92765 325 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 UPK3BQ9BT76 320 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 RHBDL2Q9NX52 303 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 MDFICQ9P1T7 246 aa6.27□□□□□ -1.41
PRKCH-208ENST00000553846 TRDV1A0A1B0GX56 115 aa6.26□□□□□ -1.41
PRKCH-208ENST00000553846 A0A1W2PPQ1 181 aa6.26□□□□□ -1.41
PRKCH-208ENST00000553846 NOTOA8MTQ0 251 aa6.26□□□□□ -1.41
PRKCH-208ENST00000553846 EBAG9O00559 213 aa6.26□□□□□ -1.41
PRKCH-208ENST00000553846 HBE1P02100 147 aa6.26□□□□□ -1.41
PRKCH-208ENST00000553846 PRM2P04554 102 aa6.26□□□□□ -1.41
PRKCH-208ENST00000553846 HNRNPCP07910 306 aaKnown RBP eCLIP6.26□□□□□ -1.41
PRKCH-208ENST00000553846 RPL5P46777 297 aaKnown RBP6.26□□□□□ -1.41
PRKCH-208ENST00000553846 HOXA1P49639 335 aaPredicted RBP6.26□□□□□ -1.41
PRKCH-208ENST00000553846 PAX9P55771 341 aa6.26□□□□□ -1.41
PRKCH-208ENST00000553846 CCL18P55774 89 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms