RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 CLINT1Q14677 625 aa9.61□□□□□ -0.87
PRPF39-204ENST00000553605 SPHARQ15513 63 aa9.61□□□□□ -0.87
PRPF39-204ENST00000553605 CDPF1Q6NVV7 123 aa9.61□□□□□ -0.87
PRPF39-204ENST00000553605 CADM3Q8N126 398 aa9.61□□□□□ -0.87
PRPF39-204ENST00000553605 ZNF114Q8NC26 417 aa9.61□□□□□ -0.87
PRPF39-204ENST00000553605 NUDCD2Q8WVJ2 157 aa9.61□□□□□ -0.87
PRPF39-204ENST00000553605 CYGBQ8WWM9 190 aa9.61□□□□□ -0.87
PRPF39-204ENST00000553605 SEPSECSQ9HD40 501 aaKnown RBP9.61□□□□□ -0.87
PRPF39-204ENST00000553605 GOLT1BQ9Y3E0 138 aa9.61□□□□□ -0.87
PRPF39-204ENST00000553605 F5H768 121 aa9.6□□□□□ -0.87
PRPF39-204ENST00000553605 PTHLHP12272 177 aa9.6□□□□□ -0.87
PRPF39-204ENST00000553605 G6PCP35575 357 aa9.6□□□□□ -0.87
PRPF39-204ENST00000553605 ARPC4P59998 168 aa9.6□□□□□ -0.87
PRPF39-204ENST00000553605 KRTAP10-1P60331 282 aa9.6□□□□□ -0.87
PRPF39-204ENST00000553605 ICAM4Q14773 271 aa9.6□□□□□ -0.87
PRPF39-204ENST00000553605 RRN3P1Q2M238 152 aa9.6□□□□□ -0.87
PRPF39-204ENST00000553605 LAIR2Q6ISS4 152 aa9.6□□□□□ -0.87
PRPF39-204ENST00000553605 ZNF818PQ6ZRF7 136 aa9.6□□□□□ -0.87
PRPF39-204ENST00000553605 UFD1Q92890 307 aa9.6□□□□□ -0.87
PRPF39-204ENST00000553605 TMEM230Q96A57 120 aa9.6□□□□□ -0.87
PRPF39-204ENST00000553605 C7orf50Q9BRJ6 194 aaKnown RBP9.6□□□□□ -0.87
PRPF39-204ENST00000553605 PLCXD1Q9NUJ7 323 aa9.6□□□□□ -0.87
PRPF39-204ENST00000553605 A0A1W2PPQ1 181 aa9.59□□□□□ -0.87
PRPF39-204ENST00000553605 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.87
PRPF39-204ENST00000553605 EREGO14944 169 aa9.59□□□□□ -0.87
PRPF39-204ENST00000553605 IFNA5P01569 189 aa9.59□□□□□ -0.87
PRPF39-204ENST00000553605 LPAR6P43657 344 aa9.59□□□□□ -0.87
PRPF39-204ENST00000553605 FXYD4P59646 89 aa9.59□□□□□ -0.87
PRPF39-204ENST00000553605 RPS25P62851 125 aaKnown RBP9.59□□□□□ -0.87
PRPF39-204ENST00000553605 GDF5OSQ5U4N7 250 aa9.59□□□□□ -0.87
PRPF39-204ENST00000553605 C16orf54Q6UWD8 224 aa9.59□□□□□ -0.87
PRPF39-204ENST00000553605 C1orf158Q8N1D5 194 aa9.59□□□□□ -0.87
PRPF39-204ENST00000553605 BPIFB6Q8NFQ5 453 aa9.59□□□□□ -0.87
PRPF39-204ENST00000553605 GLMPQ8WWB7 406 aa9.59□□□□□ -0.87
PRPF39-204ENST00000553605 FCAMRQ8WWV6 532 aa9.59□□□□□ -0.87
PRPF39-204ENST00000553605 LSM2Q9Y333 95 aaKnown RBP9.59□□□□□ -0.87
PRPF39-204ENST00000553605 U3KQE9 123 aa9.59□□□□□ -0.87
PRPF39-204ENST00000553605 TMEM235A6NFC5 223 aa9.58□□□□□ -0.88
PRPF39-204ENST00000553605 SSX5O60225 188 aa9.58□□□□□ -0.88
PRPF39-204ENST00000553605 F2RP25116 425 aa9.58□□□□□ -0.88
PRPF39-204ENST00000553605 NKX2-1P43699 371 aaPredicted RBP9.58□□□□□ -0.88
PRPF39-204ENST00000553605 OR10A3P58181 314 aa9.58□□□□□ -0.88
PRPF39-204ENST00000553605 GNG2P59768 71 aa9.58□□□□□ -0.88
PRPF39-204ENST00000553605 ERHP84090 104 aaKnown RBP9.58□□□□□ -0.88
PRPF39-204ENST00000553605 TRAM1Q15629 374 aa9.58□□□□□ -0.88
PRPF39-204ENST00000553605 ZNF709Q8N972 641 aa9.58□□□□□ -0.88
PRPF39-204ENST00000553605 TSPAN14Q8NG11 270 aa9.58□□□□□ -0.88
PRPF39-204ENST00000553605 RNF141Q8WVD5 230 aa9.58□□□□□ -0.88
PRPF39-204ENST00000553605 TSC22D3Q99576 134 aa9.58□□□□□ -0.88
PRPF39-204ENST00000553605 FKBP14Q9NWM8 211 aa9.58□□□□□ -0.88
PRPF39-204ENST00000553605 IFITM5A6NNB3 132 aa9.57□□□□□ -0.88
PRPF39-204ENST00000553605 ATP5HO75947 161 aa9.57□□□□□ -0.88
PRPF39-204ENST00000553605 DEFB130BP0DP73 79 aa9.57□□□□□ -0.88
PRPF39-204ENST00000553605 DEFB130AP0DP74 79 aa9.57□□□□□ -0.88
PRPF39-204ENST00000553605 DEFB1P60022 68 aa9.57□□□□□ -0.88
PRPF39-204ENST00000553605 CCDC90BQ9GZT6 254 aa9.57□□□□□ -0.88
PRPF39-204ENST00000553605 SLC35B3Q9H1N7 401 aa9.57□□□□□ -0.88
PRPF39-204ENST00000553605 NRN1Q9NPD7 142 aa9.57□□□□□ -0.88
PRPF39-204ENST00000553605 ZNF586Q9NXT0 402 aa9.57□□□□□ -0.88
PRPF39-204ENST00000553605 LYRM9A8MSI8 78 aa9.56□□□□□ -0.88
PRPF39-204ENST00000553605 PDCD5O14737 125 aa9.56□□□□□ -0.88
PRPF39-204ENST00000553605 RLN1P04808 185 aa9.56□□□□□ -0.88
PRPF39-204ENST00000553605 PSMA1P25786 263 aaKnown RBP9.56□□□□□ -0.88
PRPF39-204ENST00000553605 PRCDQ00LT1 54 aa9.56□□□□□ -0.88
PRPF39-204ENST00000553605 FABP5Q01469 135 aa9.56□□□□□ -0.88
PRPF39-204ENST00000553605 Q6ZRN7 208 aaPredicted RBP9.56□□□□□ -0.88
PRPF39-204ENST00000553605 TMEM17Q86X19 198 aa9.56□□□□□ -0.88
PRPF39-204ENST00000553605 BEST4Q8NFU0 473 aa9.56□□□□□ -0.88
PRPF39-204ENST00000553605 OR4B1Q8NGF8 309 aa9.56□□□□□ -0.88
PRPF39-204ENST00000553605 LGALS14Q8TCE9 139 aa9.56□□□□□ -0.88
PRPF39-204ENST00000553605 CLUHP3Q96NS8 147 aa9.56□□□□□ -0.88
PRPF39-204ENST00000553605 MAGT1Q9H0U3 335 aa9.56□□□□□ -0.88
PRPF39-204ENST00000553605 SAV1Q9H4B6 383 aaPredicted RBP9.56□□□□□ -0.88
PRPF39-204ENST00000553605 PLA2G2DQ9UNK4 145 aa9.56□□□□□ -0.88
PRPF39-204ENST00000553605 CLN5O75503 358 aa9.55□□□□□ -0.88
PRPF39-204ENST00000553605 PGLYRP1O75594 196 aaPredicted RBP9.55□□□□□ -0.88
PRPF39-204ENST00000553605 ATP5G1P05496 136 aa9.55□□□□□ -0.88
PRPF39-204ENST00000553605 HNRNPCP07910 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
PRPF39-204ENST00000553605 ATP5G3P48201 142 aa9.55□□□□□ -0.88
PRPF39-204ENST00000553605 LINC00315P59091 139 aa9.55□□□□□ -0.88
PRPF39-204ENST00000553605 PQLC1Q8N2U9 271 aa9.55□□□□□ -0.88
PRPF39-204ENST00000553605 BORCS5Q969J3 196 aa9.55□□□□□ -0.88
PRPF39-204ENST00000553605 UHRF2Q96PU4 802 aa9.55□□□□□ -0.88
PRPF39-204ENST00000553605 UPK3BQ9BT76 320 aa9.55□□□□□ -0.88
PRPF39-204ENST00000553605 MRPL36Q9P0J6 103 aaKnown RBP9.55□□□□□ -0.88
PRPF39-204ENST00000553605 M0QYG6 137 aa9.54□□□□□ -0.88
PRPF39-204ENST00000553605 CASQ2O14958 399 aaPredicted RBP9.54□□□□□ -0.88
PRPF39-204ENST00000553605 SCGB2A1O75556 95 aa9.54□□□□□ -0.88
PRPF39-204ENST00000553605 HSMCR30P0CW71 290 aa9.54□□□□□ -0.88
PRPF39-204ENST00000553605 ERVFC1-1P60608 527 aa9.54□□□□□ -0.88
PRPF39-204ENST00000553605 HSPE1P61604 102 aaKnown RBP9.54□□□□□ -0.88
PRPF39-204ENST00000553605 HAMPP81172 84 aa9.54□□□□□ -0.88
PRPF39-204ENST00000553605 PSG9Q00887 426 aa9.54□□□□□ -0.88
PRPF39-204ENST00000553605 FOXI2Q6ZQN5 318 aa9.54□□□□□ -0.88
PRPF39-204ENST00000553605 C8orf59Q8N0T1 100 aaPredicted RBP9.54□□□□□ -0.88
PRPF39-204ENST00000553605 DHRSXQ8N5I4 330 aa9.54□□□□□ -0.88
PRPF39-204ENST00000553605 OR4A16Q8NH70 328 aa9.54□□□□□ -0.88
PRPF39-204ENST00000553605 TMEM208Q9BTX3 173 aa9.54□□□□□ -0.88
PRPF39-204ENST00000553605 CBY3A6NI87 242 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 PTGES3LE9PB15 166 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms