RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 ERHP84090 104 aaKnown RBP6.49□□□□□ -1.37
SYNE2-209ENST00000553308 PSMG4Q5JS54 123 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 OR5H2Q8NGV7 314 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 MRGPRFQ96AM1 343 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 METTL26Q96S19 204 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 RAB40CQ96S21 281 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 DIABLOQ9NR28 239 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 XCL2Q9UBD3 114 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 ANAPC10Q9UM13 185 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 SSR3Q9UNL2 185 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 DNAH17Q9UFH2 4485 aa6.49□□□□□ -1.37
SYNE2-209ENST00000553308 DYNC1H1Q14204 4646 aaKnown RBP6.49□□□□□ -1.37
SYNE2-209ENST00000553308 DNAH11Q96DT5 4516 aa6.48□□□□□ -1.37
SYNE2-209ENST00000553308 ANKRD65E5RJM6 399 aa6.48□□□□□ -1.37
SYNE2-209ENST00000553308 EMP1P54849 157 aa6.48□□□□□ -1.37
SYNE2-209ENST00000553308 DHRS2Q13268 280 aa6.48□□□□□ -1.37
SYNE2-209ENST00000553308 SOHLH1Q5JUK2 328 aa6.48□□□□□ -1.37
SYNE2-209ENST00000553308 TBC1D26Q86UD7 250 aa6.48□□□□□ -1.37
SYNE2-209ENST00000553308 MAPKAPK5-AS1Q8N8E1 139 aa6.48□□□□□ -1.37
SYNE2-209ENST00000553308 FNDC4Q9H6D8 234 aaPredicted RBP6.48□□□□□ -1.37
SYNE2-209ENST00000553308 PKD1P98161 4303 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 HELTA6NFD8 242 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 C16orf90A8MZG2 172 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 CLN5O75503 358 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 IGKV1-17P01599 117 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 SPART-AS1P0CW21 52 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 RNASE2P10153 161 aaKnown RBP6.47□□□□□ -1.37
SYNE2-209ENST00000553308 HRH1P35367 487 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 SNCAP37840 140 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 TAS2R46P59540 309 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 GABARAPL2P60520 117 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 MLANAQ16655 118 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 TIGITQ495A1 244 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 C1orf134Q5TEV5 83 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 IZUMO2Q6UXV1 221 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 SLC35G3Q8N808 338 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 OR6F1Q8NGZ6 308 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 GLMPQ8WWB7 406 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 TMEM230Q96A57 120 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 NARS2Q96I59 477 aaKnown RBP6.47□□□□□ -1.37
SYNE2-209ENST00000553308 C1QTNF4Q9BXJ3 329 aa6.47□□□□□ -1.37
SYNE2-209ENST00000553308 FAM212BQ9NTI7 297 aaPredicted RBP6.47□□□□□ -1.37
SYNE2-209ENST00000553308 NACAE9PAV3 2078 aa6.46□□□□□ -1.37
SYNE2-209ENST00000553308 LOC100506127A0A0U1RQW1 187 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 ZNF705FA8MVS1 300 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-209ENST00000553308 FAM90A26D6RGX4 464 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 H3BMM0 161 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 CDK2AP2O75956 126 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 IGKV1-5P01602 117 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 ZNF705DP0CH99 300 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-209ENST00000553308 ZNF705BP0CI00 300 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-209ENST00000553308 HTN3P15516 51 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 NAT1P18440 290 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 HLA-DMAP28067 261 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 OPRK1P41145 380 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 TAS2R20P59543 309 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 NUTF2P61970 127 aaKnown RBP6.46□□□□□ -1.38
SYNE2-209ENST00000553308 TNP2Q05952 138 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 KCTD21Q4G0X4 260 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 C16orf54Q6UWD8 224 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 ZNF705AQ6ZN79 300 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-209ENST00000553308 SPARTQ8N0X7 666 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 OR4X1Q8NH49 305 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 U3KQE9 123 aa6.46□□□□□ -1.38
SYNE2-209ENST00000553308 IGHV3OR16-12A0A075B7B8 117 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 A0A0B4J293 547 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 INS-IGF2F8WCM5 200 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 CORTO00230 105 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 HNRNPCP07910 306 aaKnown RBP eCLIP6.45□□□□□ -1.38
SYNE2-209ENST00000553308 S100GP29377 79 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 HSPA13P48723 471 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 HOXA1P49639 335 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-209ENST00000553308 EIF2B2P49770 351 aaKnown RBP6.45□□□□□ -1.38
SYNE2-209ENST00000553308 FXYD7P58549 80 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 DEFB1P60022 68 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 RNF212Q495C1 297 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 TMEM69Q5SWH9 247 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 FAM222AQ5U5X8 452 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 LYSMD2Q8IV50 215 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 FCGR1BQ92637 280 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 FAM210BQ96KR6 192 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 NEU1Q99519 415 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 DKK2Q9UBU2 259 aa6.45□□□□□ -1.38
SYNE2-209ENST00000553308 TMEM189A5PLL7 270 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 SCGB2A1O75556 95 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 IGKV3-20P01619 116 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 P0C879 139 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 HLA-DRB4P13762 266 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 TGFBR1P36897 503 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 ETV6P41212 452 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 AKR1C2P52895 323 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 SUB1P53999 127 aaKnown RBP eCLIP6.44□□□□□ -1.38
SYNE2-209ENST00000553308 TSPAN5P62079 268 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 SNRPD3P62318 126 aaKnown RBP6.44□□□□□ -1.38
SYNE2-209ENST00000553308 USF2Q15853 346 aaPredicted RBP6.44□□□□□ -1.38
SYNE2-209ENST00000553308 UBE2NLQ5JXB2 153 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 GDF5OSQ5U4N7 250 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 LPCAT3Q6P1A2 487 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 TMEM88Q6PEY1 159 aa6.44□□□□□ -1.38
SYNE2-209ENST00000553308 S100A16Q96FQ6 103 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms