RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 A0A1B0GV90 55 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 A0A1W2PN81 502 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 PGPEP1LA6NFU8 196 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 GAGE10A6NGK3 116 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 M0R143 59 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 ISLRO14498 428 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 PRYO14603 147 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 FOXH1O75593 365 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 REG1AP05451 166 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 OR5G3P0C626 314 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 C8orf88P0DMB2 117 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 CT45A6P0DMU7 189 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 CT45A5P0DMU8 189 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 CT45A7P0DMV0 189 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 DEFA4P12838 97 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 GNG4P50150 75 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 PPOXP50336 477 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 SUB1P53999 127 aaKnown RBP eCLIP4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 TNFAIP6P98066 277 aaPredicted RBP4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 HOXA4Q00056 320 aaPredicted RBP4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 FOXI1Q12951 378 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 PSG5Q15238 335 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 C1orf185Q5T7R7 199 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 SPATA31B1PQ5VZV4 182 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 FAM71F2Q6NXP2 309 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF474Q6S9Z5 364 aaPredicted RBP4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 RASL11AQ6T310 242 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 IGFL3Q6UXB1 125 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 MIR17HGQ75NE6 70 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 SSX8Q7RTT4 187 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 MMD2Q8IY49 270 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 KIR2DL5AQ8N109 375 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 TMEM256Q8N2U0 113 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 C8orf31Q8N9H6 132 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 NUP37Q8NFH4 326 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 OR1L6Q8NGR2 347 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 GAFA1Q96PS6 74 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 NABP2Q9BQ15 211 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 C20orf144Q9BQM9 153 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 CHRDL1Q9BU40 450 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 COMMD5Q9GZQ3 224 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 GAL3ST2Q9H3Q3 398 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 ASCL3Q9NQ33 180 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 LINC00312Q9Y6C7 94 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 V9GYV3 84 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 EYSQ5T1H1 3165 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 NKX6-3A6NJ46 265 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF705FA8MVS1 300 aaPredicted RBP4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 K7EN84 100 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 FCN1O00602 326 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 IGHV1-46P01743 117 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 CRYABP02511 175 aaKnown RBP4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 APOA2P02652 100 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 OR4A8P0C604 315 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF705DP0CH99 300 aaPredicted RBP4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF705BP0CI00 300 aaPredicted RBP4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 RNASE2P10153 161 aaKnown RBP4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 TNFRSF1AP19438 455 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 CEACAM8P31997 349 aaPredicted RBP4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 NUTF2P61970 127 aaKnown RBP4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 CX3CL1P78423 397 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 USF2Q15853 346 aaPredicted RBP4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 HLA-DRB5Q30154 266 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 DEFB109BQ30KR1 87 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 KRTCAP3Q53RY4 240 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 OR10J3Q5JRS4 329 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 TEX43Q6ZNM6 134 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF833PQ6ZTB9 187 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 BAGE3Q86Y29 109 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 BAGE2Q86Y30 109 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 OR5AU1Q8NGC0 362 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 OR1L4Q8NGR5 311 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 VSTM2AQ8TAG5 236 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF714Q96N38 554 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 BBC3Q96PG8 261 aaPredicted RBP4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 TBX15Q96SF7 602 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 CCL13Q99616 98 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 SLC25A33Q9BSK2 321 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 HINT2Q9BX68 163 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 DNAJC4Q9NNZ3 241 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 NDUFA4L2Q9NRX3 87 aa4.84□□□□□ -1.63
CHMP4A-210ENST00000552620 DIDO1Q9BTC0 2240 aaKnown RBP4.84□□□□□ -1.64
CHMP4A-210ENST00000552620 PCNX2A6NKB5 2137 aa4.84□□□□□ -1.64
CHMP4A-210ENST00000552620 SMIM27A0A1W2PRY6 76 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 IZUMO1RA6ND01 250 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 SRRM4A7MD48 611 aaKnown RBP4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 SNURFLB1AK76 121 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 SLC17A3O00476 420 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 NUPR1O60356 82 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 MMP23AO75900 390 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 IGHV3-7P01780 117 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 HLA-DQA1P01909 254 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 WT1P19544 449 aaPredicted RBP4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 BMP5P22003 454 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 USF1P22415 310 aaPredicted RBP4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 CBLN1P23435 193 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 CRYBB3P26998 211 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 BRS3P32247 399 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 IER3P46695 156 aa4.83□□□□□ -1.64
CHMP4A-210ENST00000552620 PRSS8Q16651 343 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms