RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 MXD1Q05195 221 aa12.08□□□□□ -0.48
CACNB3-222ENST00000552465 C1QTNF4Q9BXJ3 329 aa12.08□□□□□ -0.48
CACNB3-222ENST00000552465 FXYD6Q9H0Q3 95 aa12.08□□□□□ -0.48
CACNB3-222ENST00000552465 IGKV1-39P01597 117 aa12.07□□□□□ -0.48
CACNB3-222ENST00000552465 IGKV1D-39P04432 117 aa12.07□□□□□ -0.48
CACNB3-222ENST00000552465 KCTD21Q4G0X4 260 aa12.07□□□□□ -0.48
CACNB3-222ENST00000552465 PHLDA2Q53GA4 152 aa12.07□□□□□ -0.48
CACNB3-222ENST00000552465 SPINK9Q5DT21 86 aa12.07□□□□□ -0.48
CACNB3-222ENST00000552465 PSMG4Q5JS54 123 aa12.07□□□□□ -0.48
CACNB3-222ENST00000552465 C1orf134Q5TEV5 83 aa12.07□□□□□ -0.48
CACNB3-222ENST00000552465 OR6F1Q8NGZ6 308 aa12.07□□□□□ -0.48
CACNB3-222ENST00000552465 FAM210BQ96KR6 192 aa12.07□□□□□ -0.48
CACNB3-222ENST00000552465 XCL2Q9UBD3 114 aa12.07□□□□□ -0.48
CACNB3-222ENST00000552465 ANAPC10Q9UM13 185 aa12.07□□□□□ -0.48
CACNB3-222ENST00000552465 SPART-AS1P0CW21 52 aa12.06□□□□□ -0.48
CACNB3-222ENST00000552465 PSMB9P28065 219 aa12.06□□□□□ -0.48
CACNB3-222ENST00000552465 SNCAP37840 140 aa12.06□□□□□ -0.48
CACNB3-222ENST00000552465 NUTF2P61970 127 aaKnown RBP12.06□□□□□ -0.48
CACNB3-222ENST00000552465 DHRS2Q13268 280 aa12.06□□□□□ -0.48
CACNB3-222ENST00000552465 OR5H2Q8NGV7 314 aa12.06□□□□□ -0.48
CACNB3-222ENST00000552465 CNBD2Q96M20 576 aa12.06□□□□□ -0.48
CACNB3-222ENST00000552465 MRPL36Q9P0J6 103 aaKnown RBP12.06□□□□□ -0.48
CACNB3-222ENST00000552465 HELTA6NFD8 242 aa12.05□□□□□ -0.48
CACNB3-222ENST00000552465 CLN5O75503 358 aa12.05□□□□□ -0.48
CACNB3-222ENST00000552465 CDK2AP2O75956 126 aa12.05□□□□□ -0.48
CACNB3-222ENST00000552465 NAT1P18440 290 aa12.05□□□□□ -0.48
CACNB3-222ENST00000552465 TAS2R46P59540 309 aa12.05□□□□□ -0.48
CACNB3-222ENST00000552465 RNF212Q495C1 297 aa12.05□□□□□ -0.48
CACNB3-222ENST00000552465 TBC1D26Q86UD7 250 aa12.05□□□□□ -0.48
CACNB3-222ENST00000552465 TMEM230Q96A57 120 aa12.05□□□□□ -0.48
CACNB3-222ENST00000552465 MRGPRFQ96AM1 343 aa12.05□□□□□ -0.48
CACNB3-222ENST00000552465 NARS2Q96I59 477 aaKnown RBP12.05□□□□□ -0.48
CACNB3-222ENST00000552465 NEU1Q99519 415 aa12.05□□□□□ -0.48
CACNB3-222ENST00000552465 RNF167Q9H6Y7 350 aa12.05□□□□□ -0.48
CACNB3-222ENST00000552465 U3KQE9 123 aa12.05□□□□□ -0.48
CACNB3-222ENST00000552465 INS-IGF2F8WCM5 200 aa12.04□□□□□ -0.48
CACNB3-222ENST00000552465 S100GP29377 79 aa12.04□□□□□ -0.48
CACNB3-222ENST00000552465 EIF2B2P49770 351 aaKnown RBP12.04□□□□□ -0.48
CACNB3-222ENST00000552465 MLANAQ16655 118 aa12.04□□□□□ -0.48
CACNB3-222ENST00000552465 IZUMO4Q1ZYL8 232 aa12.04□□□□□ -0.48
CACNB3-222ENST00000552465 LPCAT3Q6P1A2 487 aa12.04□□□□□ -0.48
CACNB3-222ENST00000552465 ZNF705AQ6ZN79 300 aaPredicted RBP12.04□□□□□ -0.48
CACNB3-222ENST00000552465 MAPKAPK5-AS1Q8N8E1 139 aa12.04□□□□□ -0.48
CACNB3-222ENST00000552465 TMEM189A5PLL7 270 aa12.03□□□□□ -0.48
CACNB3-222ENST00000552465 H3BMM0 161 aa12.03□□□□□ -0.48
CACNB3-222ENST00000552465 CORTO00230 105 aa12.03□□□□□ -0.48
CACNB3-222ENST00000552465 RNASE2P10153 161 aaKnown RBP12.03□□□□□ -0.48
CACNB3-222ENST00000552465 AP2S1P53680 142 aaPredicted RBP12.03□□□□□ -0.48
CACNB3-222ENST00000552465 SUB1P53999 127 aaKnown RBP eCLIP12.03□□□□□ -0.48
CACNB3-222ENST00000552465 EMP1P54849 157 aa12.03□□□□□ -0.48
CACNB3-222ENST00000552465 GABARAPL2P60520 117 aa12.03□□□□□ -0.48
CACNB3-222ENST00000552465 LYSMD2Q8IV50 215 aa12.03□□□□□ -0.48
CACNB3-222ENST00000552465 SPARTQ8N0X7 666 aa12.03□□□□□ -0.48
CACNB3-222ENST00000552465 OR4X1Q8NH49 305 aa12.03□□□□□ -0.48
CACNB3-222ENST00000552465 FNDC4Q9H6D8 234 aaPredicted RBP12.03□□□□□ -0.48
CACNB3-222ENST00000552465 SMIM9A6NGZ8 99 aa12.02□□□□□ -0.49
CACNB3-222ENST00000552465 ZNF705FA8MVS1 300 aaPredicted RBP12.02□□□□□ -0.49
CACNB3-222ENST00000552465 C16orf90A8MZG2 172 aa12.02□□□□□ -0.49
CACNB3-222ENST00000552465 IGKV1-17P01599 117 aa12.02□□□□□ -0.49
CACNB3-222ENST00000552465 ZNF705DP0CH99 300 aaPredicted RBP12.02□□□□□ -0.49
CACNB3-222ENST00000552465 ZNF705BP0CI00 300 aaPredicted RBP12.02□□□□□ -0.49
CACNB3-222ENST00000552465 TIGITQ495A1 244 aa12.02□□□□□ -0.49
CACNB3-222ENST00000552465 C16orf54Q6UWD8 224 aa12.02□□□□□ -0.49
CACNB3-222ENST00000552465 SLC35G3Q8N808 338 aa12.02□□□□□ -0.49
CACNB3-222ENST00000552465 GLMPQ8WWB7 406 aa12.02□□□□□ -0.49
CACNB3-222ENST00000552465 S100A16Q96FQ6 103 aaKnown RBP12.02□□□□□ -0.49
CACNB3-222ENST00000552465 A0A0B4J293 547 aa12.01□□□□□ -0.49
CACNB3-222ENST00000552465 FAM90A26D6RGX4 464 aa12.01□□□□□ -0.49
CACNB3-222ENST00000552465 SCGB2A1O75556 95 aa12.01□□□□□ -0.49
CACNB3-222ENST00000552465 HLA-DMAP28067 261 aa12.01□□□□□ -0.49
CACNB3-222ENST00000552465 HRH1P35367 487 aa12.01□□□□□ -0.49
CACNB3-222ENST00000552465 OPRK1P41145 380 aa12.01□□□□□ -0.49
CACNB3-222ENST00000552465 RPL5P46777 297 aaKnown RBP12.01□□□□□ -0.49
CACNB3-222ENST00000552465 SNRPD3P62318 126 aaKnown RBP12.01□□□□□ -0.49
CACNB3-222ENST00000552465 FCGR1BQ92637 280 aa12.01□□□□□ -0.49
CACNB3-222ENST00000552465 SEPSECSQ9HD40 501 aaKnown RBP12.01□□□□□ -0.49
CACNB3-222ENST00000552465 DKK2Q9UBU2 259 aa12.01□□□□□ -0.49
CACNB3-222ENST00000552465 HSPG2P98160 4391 aa12.01□□□□□ -0.49
CACNB3-222ENST00000552465 TRAV30A0A087WSZ9 112 aa12□□□□□ -0.49
CACNB3-222ENST00000552465 TMEM127O75204 238 aa12□□□□□ -0.49
CACNB3-222ENST00000552465 HNRNPCP07910 306 aaKnown RBP eCLIP12□□□□□ -0.49
CACNB3-222ENST00000552465 ETV6P41212 452 aa12□□□□□ -0.49
CACNB3-222ENST00000552465 TNP2Q05952 138 aa12□□□□□ -0.49
CACNB3-222ENST00000552465 NIPSNAP3BQ9BS92 247 aa12□□□□□ -0.49
CACNB3-222ENST00000552465 LOC100506127A0A0U1RQW1 187 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 ANKRD65E5RJM6 399 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 IGKV1-5P01602 117 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 P0C879 139 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 HLA-DRB4P13762 266 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 HSPA13P48723 471 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 UCP3P55916 312 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 TAS2R20P59543 309 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 TSPAN5P62079 268 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 TMEM69Q5SWH9 247 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 FAM222AQ5U5X8 452 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 IZUMO2Q6UXV1 221 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 RFNGQ9Y644 331 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 HLA-DRB4X5D2U9 266 aa11.99□□□□□ -0.49
CACNB3-222ENST00000552465 IGHV3OR16-12A0A075B7B8 117 aa11.98□□□□□ -0.49
CACNB3-222ENST00000552465 TEX48A0A1B0GUV7 120 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms