RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 RAB11BQ15907 218 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 GAGE13Q4V321 117 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 HSD17B12Q53GQ0 312 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 LYPD1Q8N2G4 141 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 DUSP18Q8NEJ0 188 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 ZNRF2Q8NHG8 242 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 FAM3DQ96BQ1 224 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 RAB3CQ96E17 227 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 OR10C1Q96KK4 312 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 GFI1Q99684 422 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 HSD17B10Q99714 261 aaKnown RBP3.78□□□□□ -1.8
HOXB3-213ENST00000552000 GINS3Q9BRX5 216 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 NIPSNAP3BQ9BS92 247 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 SLC5A7Q9GZV3 580 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 VSIRQ9H7M9 311 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 EXTL2Q9UBQ6 330 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 OR2W1Q9Y3N9 320 aa3.78□□□□□ -1.8
HOXB3-213ENST00000552000 F11RQ9Y624 299 aaKnown RBP3.78□□□□□ -1.8
HOXB3-213ENST00000552000 IGHV3OR16-12A0A075B7B8 117 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 TMEM272A0A1B0GTI8 110 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 TEX50A0A1B0GTY4 177 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 EFCAB10A6NFE3 127 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 B5MCH6 92 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 K7EQG2 157 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 MYL12BO14950 172 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 NUDT3O95989 172 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 FUSP35637 526 aaKnown RBP eCLIP3.77□□□□□ -1.81
HOXB3-213ENST00000552000 TALDO1P37837 337 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 CAMPP49913 170 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 XGP55808 180 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 DLK1P80370 383 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 ST3GAL4Q11206 333 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 RCN1Q15293 331 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 SSX1Q16384 188 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 FAM222AQ5U5X8 452 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 THOC7Q6I9Y2 204 aaKnown RBP3.77□□□□□ -1.81
HOXB3-213ENST00000552000 ZNF773Q6PK81 442 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 TOMM20LQ6UXN7 152 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 SPAG16Q8N0X2 631 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 C15orf53Q8NAA6 179 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 OR1L8Q8NGR8 309 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 GRAMD2BQ96HH9 432 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 NXF2Q9GZY0 626 aaKnown RBP3.77□□□□□ -1.81
HOXB3-213ENST00000552000 DKK2Q9UBU2 259 aa3.77□□□□□ -1.81
HOXB3-213ENST00000552000 AK6Q9Y3D8 172 aaKnown RBP3.77□□□□□ -1.81
HOXB3-213ENST00000552000 TEX48A0A1B0GUV7 120 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 TMEM189A5PLL7 270 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 I3L2K1 104 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 MFNGO00587 321 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 GNG7O60262 68 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 SMR3BP02814 79 aaPredicted RBP3.76□□□□□ -1.81
HOXB3-213ENST00000552000 UCHL1P09936 223 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 NQO2P16083 231 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 HIST1H1DP16402 221 aaKnown RBP3.76□□□□□ -1.81
HOXB3-213ENST00000552000 GADD45AP24522 165 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 RPS19P39019 145 aaKnown RBP3.76□□□□□ -1.81
HOXB3-213ENST00000552000 WNT4P56705 351 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 TAS2R31P59538 309 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 POU2AF1Q16633 256 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 PSMG4Q5JS54 123 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 ZNF705AQ6ZN79 300 aaPredicted RBP3.76□□□□□ -1.81
HOXB3-213ENST00000552000 Q6ZS49 121 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 HSD17B13Q7Z5P4 300 aaPredicted RBP3.76□□□□□ -1.81
HOXB3-213ENST00000552000 MS4A15Q8N5U1 240 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 DMBX1Q8NFW5 382 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 OR10R2Q8NGX6 335 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 SECTM1Q8WVN6 248 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 LSM10Q969L4 123 aaKnown RBP3.76□□□□□ -1.81
HOXB3-213ENST00000552000 SLC25A46Q96AG3 418 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 RAB40CQ96S21 281 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 NEU1Q99519 415 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 AIFM2Q9BRQ8 373 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 C1QTNF4Q9BXJ3 329 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 TMEM231Q9H6L2 316 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 CCL28Q9NRJ3 127 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 ELF5Q9UKW6 265 aaPredicted RBP3.76□□□□□ -1.81
HOXB3-213ENST00000552000 RAB22AQ9UL26 194 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 RFNGQ9Y644 331 aa3.76□□□□□ -1.81
HOXB3-213ENST00000552000 RPS10-NUDT3A0A1W2PQS6 291 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 SMIM9A6NGZ8 99 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 ZNF705FA8MVS1 300 aaPredicted RBP3.75□□□□□ -1.81
HOXB3-213ENST00000552000 SULT1C2O00338 296 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 RBFOX2O43251 390 aaKnown RBP eCLIP3.75□□□□□ -1.81
HOXB3-213ENST00000552000 CIB2O75838 187 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 MT-CO2P00403 227 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 HPRT1P00492 218 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 CTXN2P0C2S0 81 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 ZNF705DP0CH99 300 aaPredicted RBP3.75□□□□□ -1.81
HOXB3-213ENST00000552000 ZNF705BP0CI00 300 aaPredicted RBP3.75□□□□□ -1.81
HOXB3-213ENST00000552000 DTYMKP23919 212 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 FGF9P31371 208 aaPredicted RBP3.75□□□□□ -1.81
HOXB3-213ENST00000552000 P2RY1P47900 373 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 FXYD7P58549 80 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 DAD1P61803 113 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 NUTF2P61970 127 aaKnown RBP3.75□□□□□ -1.81
HOXB3-213ENST00000552000 DHRS2Q13268 280 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 OXA1LQ15070 435 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 HES5Q5TA89 166 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 GSG1LQ6UXU4 331 aa3.75□□□□□ -1.81
HOXB3-213ENST00000552000 ZNF555Q8NEP9 628 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms