RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 SSX2Q16385 188 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 REC114Q7Z4M0 266 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 LINC00469Q8N7U9 141 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 ST6GALNAC3Q8NDV1 305 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 OR5AN1Q8NGI8 311 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 C11orf52Q96A22 123 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 SLC25A33Q9BSK2 321 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 LINC00574Q9H8X3 128 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 DNAJC4Q9NNZ3 241 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 NAT8BQ9UHF3 227 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 V9GYV3 84 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 CEP295Q9C0D2 2601 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 SERF1AO75920 110 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 RNF224P0DH78 156 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 PRB4P10163 310 aaPredicted RBP7.44□□□□□ -1.22
UBE2N-205ENST00000550657 CNTFRP26992 372 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 RUSC1-AS1Q66K80 236 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 PRSS33Q8NF86 280 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 RNASE6Q93091 150 aaKnown RBP7.44□□□□□ -1.22
UBE2N-205ENST00000550657 SLC25A2Q9BXI2 301 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 SAMD10Q9BYL1 202 aa7.44□□□□□ -1.22
UBE2N-205ENST00000550657 USF1P22415 310 aaPredicted RBP7.43□□□□□ -1.22
UBE2N-205ENST00000550657 COX7A1P24310 79 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 LOXP28300 417 aaPredicted RBP7.43□□□□□ -1.22
UBE2N-205ENST00000550657 RANP62826 216 aaKnown RBP7.43□□□□□ -1.22
UBE2N-205ENST00000550657 GNG5P63218 68 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 IQCJQ1A5X6 159 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 C10orf113Q5VZT2 155 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 Q8NA96 180 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 OR1B1Q8NGR6 318 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 WASHC3Q9Y3C0 194 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 SPTA1P02549 2419 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 CGB1A6NKQ9 187 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 VSTM5A8MXK1 200 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 C9JCJ5 164 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 E7EQL1 145 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 TDGF1P3P51864 188 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 TNXAQ16473 311 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 IBA57Q5T440 356 aaKnown RBP7.43□□□□□ -1.22
UBE2N-205ENST00000550657 LURAP1LQ8IV03 231 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 IGFBPL1Q8WX77 278 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 PAXXQ9BUH6 204 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 GSX1Q9H4S2 264 aaPredicted RBP7.43□□□□□ -1.22
UBE2N-205ENST00000550657 TP53TG3Q9ULZ0 132 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 SSUH2Q9Y2M2 353 aa7.43□□□□□ -1.22
UBE2N-205ENST00000550657 A0A1W2PN81 502 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 A8MWP6 167 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 FAM87AP0C7U9 286 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 YPEL3P61236 119 aaPredicted RBP7.42□□□□□ -1.22
UBE2N-205ENST00000550657 TMEM177Q53S58 311 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 LEMD1Q68G75 181 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 TOMM20LQ6UXN7 152 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 LINC01560Q8TB33 94 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 TBX15Q96SF7 602 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 HSPB9Q9BQS6 159 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 TACC2O95359 2948 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 A0A1W2PPI3 338 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 FNDC10F2Z333 226 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 TOX4O94842 621 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 VMA21Q3ZAQ7 101 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 PDPNQ86YL7 162 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 VSTM2AQ8TAG5 236 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 TMEM167AQ8TBQ9 72 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 FAM168AQ92567 244 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 TMEM186Q96B77 213 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 CBLN4Q9NTU7 201 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 NAGKQ9UJ70 344 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 PLXNB1O43157 2135 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 MUC6Q6W4X9 2439 aa7.42□□□□□ -1.22
UBE2N-205ENST00000550657 IGHV1-69-2A0A0G2JMI3 117 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 FAM90A27PA6NNH2 459 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 IGLV2-23P01705 113 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 IGHV1-8P0DP01 117 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 SUB1P53999 127 aaKnown RBP eCLIP7.41□□□□□ -1.22
UBE2N-205ENST00000550657 TMEM30BQ3MIR4 351 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 PATE2Q6UY27 113 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 LINC00305Q7Z4B0 112 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 FAM167A-AS1Q96KT0 104 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 AMMECR1Q9Y4X0 333 aaPredicted RBP7.41□□□□□ -1.22
UBE2N-205ENST00000550657 TPPP2P59282 170 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 DNLZQ5SXM8 178 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 Q6ZWC4 215 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 CACNG8Q8WXS5 425 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 POLR3KQ9Y2Y1 108 aaPredicted RBP7.41□□□□□ -1.22
UBE2N-205ENST00000550657 CSMD1Q96PZ7 3565 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 NBASA2RRP1 2371 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 NAV3Q8IVL0 2385 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 SHISA9B4DS77 424 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 LY6HO94772 140 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 PMCHP20382 165 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 CDKN1AP38936 164 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 LINC00310P59036 64 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 TDRG1Q3Y452 100 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 ABCA1O95477 2261 aa7.41□□□□□ -1.22
UBE2N-205ENST00000550657 A0A1W2PRE2 83 aa7.4□□□□□ -1.22
UBE2N-205ENST00000550657 TCRBV4S1A1TA0A5B7 111 aa7.4□□□□□ -1.22
UBE2N-205ENST00000550657 PPOXP50336 477 aa7.4□□□□□ -1.22
UBE2N-205ENST00000550657 BPIFB3P59826 476 aa7.4□□□□□ -1.22
UBE2N-205ENST00000550657 KRTDAPP60985 99 aa7.4□□□□□ -1.22
UBE2N-205ENST00000550657 VN1R17PQ8TDU5 208 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms