RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 SUB1P53999 127 aaKnown RBP eCLIP15.77■□□□□ 0.12
SMARCC2-210ENST00000550519 PIGPP57054 158 aa15.77■□□□□ 0.12
SMARCC2-210ENST00000550519 NCS1P62166 190 aa15.77■□□□□ 0.12
SMARCC2-210ENST00000550519 TRPT1Q86TN4 253 aaKnown RBP15.77■□□□□ 0.12
SMARCC2-210ENST00000550519 C11orf94C9JXX5 98 aa15.76■□□□□ 0.11
SMARCC2-210ENST00000550519 HPGDSO60760 199 aa15.76■□□□□ 0.11
SMARCC2-210ENST00000550519 ATG12O94817 140 aa15.76■□□□□ 0.11
SMARCC2-210ENST00000550519 ETV6P41212 452 aa15.76■□□□□ 0.11
SMARCC2-210ENST00000550519 TMEM41BQ5BJD5 291 aa15.76■□□□□ 0.11
SMARCC2-210ENST00000550519 OR4X1Q8NH49 305 aa15.76■□□□□ 0.11
SMARCC2-210ENST00000550519 GRAMD2BQ96HH9 432 aa15.76■□□□□ 0.11
SMARCC2-210ENST00000550519 KLK11Q9UBX7 282 aa15.76■□□□□ 0.11
SMARCC2-210ENST00000550519 HECTD4Q9Y4D8 3996 aa15.76■□□□□ 0.11
SMARCC2-210ENST00000550519 C3orf85A0A1B0GTC6 90 aa15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 IGLL5B9A064 214 aa15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 RBMY1A1P0DJD3 496 aaKnown RBP15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 RBMY1CP0DJD4 496 aa15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 RPL5P46777 297 aaKnown RBP15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 RBMY1FQ15415 496 aaKnown RBP15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 MLANAQ16655 118 aa15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 BSXQ3C1V8 233 aa15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 RNASE10Q5GAN6 216 aaKnown RBP15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 ARRDC1Q8N5I2 433 aa15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 STXBP6Q8NFX7 210 aa15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 METTL26Q96S19 204 aa15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 PDCD10Q9BUL8 212 aa15.75■□□□□ 0.11
SMARCC2-210ENST00000550519 IGHV4-28A0A0C4DH34 117 aa15.74■□□□□ 0.11
SMARCC2-210ENST00000550519 IGKV1-17P01599 117 aa15.74■□□□□ 0.11
SMARCC2-210ENST00000550519 SPP1P10451 314 aa15.74■□□□□ 0.11
SMARCC2-210ENST00000550519 P2RY1P47900 373 aa15.74■□□□□ 0.11
SMARCC2-210ENST00000550519 HOXA1P49639 335 aaPredicted RBP15.74■□□□□ 0.11
SMARCC2-210ENST00000550519 PPP5CP53041 499 aa15.74■□□□□ 0.11
SMARCC2-210ENST00000550519 VBP1P61758 197 aa15.74■□□□□ 0.11
SMARCC2-210ENST00000550519 MORN3Q6PF18 240 aaPredicted RBP15.74■□□□□ 0.11
SMARCC2-210ENST00000550519 DCANP1Q8TF63 244 aa15.74■□□□□ 0.11
SMARCC2-210ENST00000550519 FUNDC2Q9BWH2 189 aa15.74■□□□□ 0.11
SMARCC2-210ENST00000550519 DNAH6Q9C0G6 4158 aa15.73■□□□□ 0.11
SMARCC2-210ENST00000550519 A0A0G2JRQ6 117 aa15.73■□□□□ 0.11
SMARCC2-210ENST00000550519 ZNF705EA8MWA4 302 aaPredicted RBP15.73■□□□□ 0.11
SMARCC2-210ENST00000550519 CD3DP04234 171 aa15.73■□□□□ 0.11
SMARCC2-210ENST00000550519 MIFP14174 115 aa15.73■□□□□ 0.11
SMARCC2-210ENST00000550519 OPRK1P41145 380 aa15.73■□□□□ 0.11
SMARCC2-210ENST00000550519 SP6Q3SY56 376 aa15.73■□□□□ 0.11
SMARCC2-210ENST00000550519 TMEM230Q96A57 120 aa15.73■□□□□ 0.11
SMARCC2-210ENST00000550519 X6R8D5 127 aa15.73■□□□□ 0.11
SMARCC2-210ENST00000550519 KNCNA6PVL3 124 aa15.72■□□□□ 0.11
SMARCC2-210ENST00000550519 ZNF688P0C7X2 276 aa15.72■□□□□ 0.11
SMARCC2-210ENST00000550519 C4BPBP20851 252 aa15.72■□□□□ 0.11
SMARCC2-210ENST00000550519 UCP1P25874 307 aa15.72■□□□□ 0.11
SMARCC2-210ENST00000550519 TRIM16LQ309B1 348 aa15.72■□□□□ 0.11
SMARCC2-210ENST00000550519 RNASE12Q5GAN4 147 aaKnown RBP15.72■□□□□ 0.11
SMARCC2-210ENST00000550519 ENY2Q9NPA8 101 aa15.72■□□□□ 0.11
SMARCC2-210ENST00000550519 U3KQE9 123 aa15.72■□□□□ 0.11
SMARCC2-210ENST00000550519 AGRNO00468 2067 aa15.72■□□□□ 0.11
SMARCC2-210ENST00000550519 SCGB2A1O75556 95 aa15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 TNFAIP8O95379 198 aa15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 TBPP20226 339 aa15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 HLA-DMBP28068 263 aa15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 RORCP51449 518 aa15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 AARDQ4LEZ3 155 aa15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 Q6ZRM9 215 aa15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 OR52I2Q8NH67 350 aa15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 ZFAND1Q8TCF1 268 aa15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 RRNAD1Q96FB5 475 aaKnown RBP15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 NARS2Q96I59 477 aaKnown RBP15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 COPZ2Q9P299 210 aa15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 MTFP1Q9UDX5 166 aa15.71■□□□□ 0.11
SMARCC2-210ENST00000550519 TRAV30A0A087WSZ9 112 aa15.7■□□□□ 0.1
SMARCC2-210ENST00000550519 FAM25AB3EWG3 89 aa15.7■□□□□ 0.1
SMARCC2-210ENST00000550519 FAM25CB3EWG5 89 aa15.7■□□□□ 0.1
SMARCC2-210ENST00000550519 FAM25GB3EWG6 89 aa15.7■□□□□ 0.1
SMARCC2-210ENST00000550519 TIGITQ495A1 244 aa15.7■□□□□ 0.1
SMARCC2-210ENST00000550519 CCDC71LQ8N9Z2 235 aa15.7■□□□□ 0.1
SMARCC2-210ENST00000550519 CSNK1G2-AS1Q8NCQ2 148 aa15.7■□□□□ 0.1
SMARCC2-210ENST00000550519 OR4D10Q8NGI6 311 aa15.7■□□□□ 0.1
SMARCC2-210ENST00000550519 TERB2Q8NHR7 220 aa15.7■□□□□ 0.1
SMARCC2-210ENST00000550519 ELOA3CA0A087WX78 387 aaPredicted RBP15.69■□□□□ 0.1
SMARCC2-210ENST00000550519 B3GALNT1O75752 331 aa15.69■□□□□ 0.1
SMARCC2-210ENST00000550519 SPCS3P61009 180 aa15.69■□□□□ 0.1
SMARCC2-210ENST00000550519 ACTL10Q5JWF8 245 aa15.69■□□□□ 0.1
SMARCC2-210ENST00000550519 MZT2AQ6P582 158 aa15.69■□□□□ 0.1
SMARCC2-210ENST00000550519 Q6ZTC4 211 aa15.69■□□□□ 0.1
SMARCC2-210ENST00000550519 OR13C8Q8NGS7 320 aa15.69■□□□□ 0.1
SMARCC2-210ENST00000550519 OR52E5Q8NH55 327 aa15.69■□□□□ 0.1
SMARCC2-210ENST00000550519 KIAA1109Q2LD37 5005 aa15.68■□□□□ 0.1
SMARCC2-210ENST00000550519 TRAV10A0A0B4J240 114 aa15.68■□□□□ 0.1
SMARCC2-210ENST00000550519 CD74P04233 296 aa15.68■□□□□ 0.1
SMARCC2-210ENST00000550519 IGLC1P0CG04 106 aa15.68■□□□□ 0.1
SMARCC2-210ENST00000550519 HTR2BP41595 481 aa15.68■□□□□ 0.1
SMARCC2-210ENST00000550519 FAM219AQ8IW50 185 aa15.68■□□□□ 0.1
SMARCC2-210ENST00000550519 ABHD1Q96SE0 405 aa15.68■□□□□ 0.1
SMARCC2-210ENST00000550519 RPS10-NUDT3A0A1W2PQS6 291 aa15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 HELTA6NFD8 242 aa15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 CDS2O95674 445 aa15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 EIF2B2P49770 351 aaKnown RBP15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 C16orf54Q6UWD8 224 aa15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 TMEM229BQ8NBD8 167 aa15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 RNASE11Q8TAA1 199 aaKnown RBP15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 MARCH1Q8TCQ1 289 aa15.67■□□□□ 0.1
SMARCC2-210ENST00000550519 GLMPQ8WWB7 406 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms