RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 INS-IGF2F8WCM5 200 aa16.7■□□□□ 0.26
PRDM4-205ENST00000550376 OR10J4P0C629 311 aa16.7■□□□□ 0.26
PRDM4-205ENST00000550376 C15orf54Q8N8G6 183 aa16.7■□□□□ 0.26
PRDM4-205ENST00000550376 IGKV1D-37A0A075B6S9 117 aa16.7■□□□□ 0.26
PRDM4-205ENST00000550376 PGPEP1LA6NFU8 196 aa16.7■□□□□ 0.26
PRDM4-205ENST00000550376 TOX4O94842 621 aa16.7■□□□□ 0.26
PRDM4-205ENST00000550376 NDUFB4O95168 129 aa16.7■□□□□ 0.26
PRDM4-205ENST00000550376 CXorf1O96002 111 aa16.7■□□□□ 0.26
PRDM4-205ENST00000550376 GCHFRP30047 84 aa16.7■□□□□ 0.26
PRDM4-205ENST00000550376 CACNG8Q8WXS5 425 aa16.7■□□□□ 0.26
PRDM4-205ENST00000550376 CCL19Q99731 98 aa16.7■□□□□ 0.26
PRDM4-205ENST00000550376 SIRPDQ9H106 197 aa16.7■□□□□ 0.26
PRDM4-205ENST00000550376 UBR5O95071 2799 aaPredicted RBP16.7■□□□□ 0.26
PRDM4-205ENST00000550376 ABCA12Q86UK0 2595 aa16.69■□□□□ 0.26
PRDM4-205ENST00000550376 IGHV3OR16-10A0A075B7F0 116 aa16.69■□□□□ 0.26
PRDM4-205ENST00000550376 NCBP2LA6PVI3 153 aaKnown RBP16.69■□□□□ 0.26
PRDM4-205ENST00000550376 FNDC10F2Z333 226 aa16.69■□□□□ 0.26
PRDM4-205ENST00000550376 GPX4P36969 197 aaPredicted RBP16.69■□□□□ 0.26
PRDM4-205ENST00000550376 KLF17Q5JT82 389 aaPredicted RBP16.69■□□□□ 0.26
PRDM4-205ENST00000550376 CEACAM3P40198 252 aa16.69■□□□□ 0.26
PRDM4-205ENST00000550376 ATP5IP56385 69 aaPredicted RBP16.69■□□□□ 0.26
PRDM4-205ENST00000550376 CYP2G1PQ6ZSU1 146 aa16.69■□□□□ 0.26
PRDM4-205ENST00000550376 RNASEH2CQ8TDP1 164 aaKnown RBP16.69■□□□□ 0.26
PRDM4-205ENST00000550376 KCNIP2Q9NS61 270 aa16.69■□□□□ 0.26
PRDM4-205ENST00000550376 ZANQ9Y493 2812 aa16.68■□□□□ 0.26
PRDM4-205ENST00000550376 IGHV2-70DA0A0C4DH43 119 aa16.68■□□□□ 0.26
PRDM4-205ENST00000550376 TBX15Q96SF7 602 aa16.68■□□□□ 0.26
PRDM4-205ENST00000550376 NBR2O15453 112 aa16.68■□□□□ 0.26
PRDM4-205ENST00000550376 TMEM241Q24JQ0 296 aa16.68■□□□□ 0.26
PRDM4-205ENST00000550376 FAM120AOSQ5T036 256 aa16.68■□□□□ 0.26
PRDM4-205ENST00000550376 ZNF503Q96F45 646 aa16.68■□□□□ 0.26
PRDM4-205ENST00000550376 S4R3C0 116 aa16.68■□□□□ 0.26
PRDM4-205ENST00000550376 A1L4Q6 167 aa16.67■□□□□ 0.26
PRDM4-205ENST00000550376 RNF212Q495C1 297 aa16.67■□□□□ 0.26
PRDM4-205ENST00000550376 FUT9Q9Y231 359 aa16.67■□□□□ 0.26
PRDM4-205ENST00000550376 OR7C2O60412 319 aa16.67■□□□□ 0.26
PRDM4-205ENST00000550376 PTPN13Q12923 2485 aa16.67■□□□□ 0.26
PRDM4-205ENST00000550376 TGIF2-C20orf24A0A0A6YYL0 155 aa16.66■□□□□ 0.26
PRDM4-205ENST00000550376 SCO2A0A1W2PP80 73 aa16.66■□□□□ 0.26
PRDM4-205ENST00000550376 TMEM250H0YL14 139 aa16.66■□□□□ 0.26
PRDM4-205ENST00000550376 MT-CO2P00403 227 aa16.66■□□□□ 0.26
PRDM4-205ENST00000550376 CXCL1P09341 107 aa16.66■□□□□ 0.26
PRDM4-205ENST00000550376 HNF1AP20823 631 aa16.66■□□□□ 0.26
PRDM4-205ENST00000550376 Q8WTZ3 238 aa16.66■□□□□ 0.26
PRDM4-205ENST00000550376 IGHV4-61A0A0C4DH41 118 aa16.66■□□□□ 0.26
PRDM4-205ENST00000550376 MT-ND4LP03901 98 aa16.66■□□□□ 0.26
PRDM4-205ENST00000550376 RPL23P62829 140 aaKnown RBP16.66■□□□□ 0.26
PRDM4-205ENST00000550376 WNT10AQ9GZT5 417 aa16.66■□□□□ 0.26
PRDM4-205ENST00000550376 TUBA4BQ9H853 241 aa16.66■□□□□ 0.26
PRDM4-205ENST00000550376 RAB5AP20339 215 aa16.65■□□□□ 0.26
PRDM4-205ENST00000550376 CTAG1AP78358 180 aa16.65■□□□□ 0.26
PRDM4-205ENST00000550376 FXYD3Q14802 87 aa16.65■□□□□ 0.26
PRDM4-205ENST00000550376 CLEC12BQ2HXU8 276 aa16.65■□□□□ 0.26
PRDM4-205ENST00000550376 PATE2Q6UY27 113 aa16.65■□□□□ 0.26
PRDM4-205ENST00000550376 C1orf122Q6ZSJ8 110 aa16.65■□□□□ 0.26
PRDM4-205ENST00000550376 NECAP1Q8NC96 275 aa16.65■□□□□ 0.26
PRDM4-205ENST00000550376 SAV1Q9H4B6 383 aaPredicted RBP16.65■□□□□ 0.26
PRDM4-205ENST00000550376 NAT8Q9UHE5 227 aa16.65■□□□□ 0.26
PRDM4-205ENST00000550376 ORM2P19652 201 aa16.65■□□□□ 0.26
PRDM4-205ENST00000550376 OR4X1Q8NH49 305 aa16.65■□□□□ 0.26
PRDM4-205ENST00000550376 PERPQ96FX8 193 aa16.65■□□□□ 0.26
PRDM4-205ENST00000550376 YPEL4Q96NS1 127 aa16.65■□□□□ 0.26
PRDM4-205ENST00000550376 F11RQ9Y624 299 aaKnown RBP16.65■□□□□ 0.26
PRDM4-205ENST00000550376 HABP2Q14520 560 aaPredicted RBP16.64■□□□□ 0.25
PRDM4-205ENST00000550376 ELOBQ15370 118 aa16.64■□□□□ 0.25
PRDM4-205ENST00000550376 LINC00518Q8N0U6 118 aa16.64■□□□□ 0.25
PRDM4-205ENST00000550376 ZNF114Q8NC26 417 aa16.64■□□□□ 0.25
PRDM4-205ENST00000550376 TNFRSF19Q9NS68 423 aa16.64■□□□□ 0.25
PRDM4-205ENST00000550376 OR5G3P0C626 314 aa16.64■□□□□ 0.25
PRDM4-205ENST00000550376 ATP5J2P56134 94 aa16.64■□□□□ 0.25
PRDM4-205ENST00000550376 ZNF843Q8N446 348 aa16.64■□□□□ 0.25
PRDM4-205ENST00000550376 OR1P1Q8NH06 330 aa16.64■□□□□ 0.25
PRDM4-205ENST00000550376 TCRBV4S1A1TA0A5B7 111 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 PSMB11A5LHX3 300 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 MAS1LP35410 378 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 SAA4P35542 130 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 PDLIM4P50479 330 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 TMEM249Q2WGJ8 235 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 FAM168AQ92567 244 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 AJUBAQ96IF1 538 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 DNAJC4Q9NNZ3 241 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 CHD6Q8TD26 2715 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 PYYP10082 97 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 NDPQ00604 133 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 C5orf64Q2M2E5 130 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 PIP4P2Q8N4L2 257 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 KIR3DL3Q8N743 410 aa16.63■□□□□ 0.25
PRDM4-205ENST00000550376 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.63■□□□□ 0.257e-6■□□□□ 9.3
PRDM4-205ENST00000550376 TRBV20OR9-2A0A075B6H5 130 aa16.62■□□□□ 0.25
PRDM4-205ENST00000550376 A0A087WWC5 75 aa16.62■□□□□ 0.25
PRDM4-205ENST00000550376 SRSF1Q07955 248 aaKnown RBP eCLIP16.62■□□□□ 0.25
PRDM4-205ENST00000550376 OR2T10Q8NGZ9 312 aa16.62■□□□□ 0.25
PRDM4-205ENST00000550376 RNF5Q99942 180 aa16.62■□□□□ 0.25
PRDM4-205ENST00000550376 SH2D7A6NKC9 451 aaPredicted RBP16.62■□□□□ 0.25
PRDM4-205ENST00000550376 COX7A2P2O60397 106 aa16.62■□□□□ 0.25
PRDM4-205ENST00000550376 OR1B1Q8NGR6 318 aa16.62■□□□□ 0.25
PRDM4-205ENST00000550376 TECRQ9NZ01 308 aaKnown RBP16.62■□□□□ 0.25
PRDM4-205ENST00000550376 IGHV4-30-2A0A087WSY4 118 aa16.61■□□□□ 0.25
PRDM4-205ENST00000550376 CRYGCP07315 174 aa16.61■□□□□ 0.25
PRDM4-205ENST00000550376 CX3CL1P78423 397 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms