RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TCTAP57738 103 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 HSPE1P61604 102 aaKnown RBP5.58□□□□□ -1.52
NEK3-201ENST00000550331 TSPAN5P62079 268 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 ERHP84090 104 aaKnown RBP5.58□□□□□ -1.52
NEK3-201ENST00000550331 RBMS2Q15434 407 aaKnown RBP5.58□□□□□ -1.52
NEK3-201ENST00000550331 TOMM20LQ6UXN7 152 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 TCF24Q7RTU0 167 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 OR11H2Q8NH07 326 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 C11orf45Q8TAV5 145 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 MRGPRFQ96AM1 343 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 PINX1Q96BK5 328 aaKnown RBP5.58□□□□□ -1.52
NEK3-201ENST00000550331 VSIRQ9H7M9 311 aa5.58□□□□□ -1.52
NEK3-201ENST00000550331 IGKV3-7A0A075B6H7 116 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 SMIM31A0A1B0GVY4 71 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 A6NHS1 94 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 CORTO00230 105 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 ST8SIA3O43173 380 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 CA1P00915 261 aaPredicted RBP5.57□□□□□ -1.52
NEK3-201ENST00000550331 APOA1P02647 267 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 IFNA4P05014 189 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 TGFBR1P36897 503 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 NANOS2P60321 138 aaKnown RBP5.57□□□□□ -1.52
NEK3-201ENST00000550331 TMEM187Q14656 261 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 PVRIGQ6DKI7 326 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 ZNF600Q6ZNG1 722 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 GBGT1Q8N5D6 347 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 DUSP18Q8NEJ0 188 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 ST8SIA2Q92186 375 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 ANAPC16Q96DE5 110 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 YIPF6Q96EC8 236 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 MS4A6AQ9H2W1 248 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 HRH4Q9H3N8 390 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 TMEM231Q9H6L2 316 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 VCX3AQ9NNX9 186 aa5.57□□□□□ -1.52
NEK3-201ENST00000550331 IGHV3OR16-13A0A075B7E8 117 aa5.56□□□□□ -1.52
NEK3-201ENST00000550331 IGHV3-74A0A0B4J1X5 117 aa5.56□□□□□ -1.52
NEK3-201ENST00000550331 DNASE2O00115 360 aaPredicted RBP5.56□□□□□ -1.52
NEK3-201ENST00000550331 SCGB2A1O75556 95 aa5.56□□□□□ -1.52
NEK3-201ENST00000550331 IGHV3-48P01763 117 aa5.56□□□□□ -1.52
NEK3-201ENST00000550331 SNCAP37840 140 aa5.56□□□□□ -1.52
NEK3-201ENST00000550331 SUB1P53999 127 aaKnown RBP eCLIP5.56□□□□□ -1.52
NEK3-201ENST00000550331 DEFB131AP59861 70 aa5.56□□□□□ -1.52
NEK3-201ENST00000550331 RND3P61587 244 aa5.56□□□□□ -1.52
NEK3-201ENST00000550331 C4orf46Q504U0 113 aa5.56□□□□□ -1.52
NEK3-201ENST00000550331 TMEM41BQ5BJD5 291 aa5.56□□□□□ -1.52
NEK3-201ENST00000550331 C2CD4CQ8TF44 421 aa5.56□□□□□ -1.52
NEK3-201ENST00000550331 ZNF486Q96H40 463 aaPredicted RBP5.56□□□□□ -1.52
NEK3-201ENST00000550331 FBXL17Q9UF56 701 aa5.56□□□□□ -1.52
NEK3-201ENST00000550331 PUS1Q9Y606 427 aaKnown RBP eCLIP5.56□□□□□ -1.52
NEK3-201ENST00000550331 A0A087WXM4 84 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 A0A1B0GU03 582 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 A0A1W2PS18 150 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 C11orf94C9JXX5 98 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 ATG12O94817 140 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 TMEM50AO95807 157 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 IGKV1-5P01602 117 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 APOHP02749 345 aaPredicted RBP5.55□□□□□ -1.52
NEK3-201ENST00000550331 P0C879 139 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 SPP1P10451 314 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 NPPCP23582 126 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 AKR1C2P52895 323 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 LSM3P62310 102 aaKnown RBP5.55□□□□□ -1.52
NEK3-201ENST00000550331 RPL11P62913 178 aaKnown RBP5.55□□□□□ -1.52
NEK3-201ENST00000550331 LEMD1Q68G75 181 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 MORN3Q6PF18 240 aaPredicted RBP5.55□□□□□ -1.52
NEK3-201ENST00000550331 TRPT1Q86TN4 253 aaKnown RBP5.55□□□□□ -1.52
NEK3-201ENST00000550331 LHFPL1Q86WI0 220 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 SNX29P2Q8IUI4 249 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 STHQ8IWL8 128 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 ARRDC1Q8N5I2 433 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 SLC35G3Q8N808 338 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 Q8NAQ8 132 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 OR4X1Q8NH49 305 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 GRAMD2BQ96HH9 432 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 PDCD10Q9BUL8 212 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 COMMD3Q9UBI1 195 aa5.55□□□□□ -1.52
NEK3-201ENST00000550331 A0A0B4J293 547 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 IGHV3-66A0A0C4DH42 116 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 K7EQG2 157 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 M0QYG6 137 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 CLN5O75503 358 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 B3GALNT1O75752 331 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 IFNA17P01571 189 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 RNASE2P10153 161 aaKnown RBP5.54□□□□□ -1.52
NEK3-201ENST00000550331 MIFP14174 115 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 PGAM2P15259 253 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 ELK1P19419 428 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 TBPP20226 339 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 CRYBB3P26998 211 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 RPL5P46777 297 aaKnown RBP5.54□□□□□ -1.52
NEK3-201ENST00000550331 PIGPP57054 158 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 NCS1P62166 190 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 IZUMO4Q1ZYL8 232 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 SPINK9Q5DT21 86 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 RNASE10Q5GAN6 216 aaKnown RBP5.54□□□□□ -1.52
NEK3-201ENST00000550331 FAM24BQ8N5W8 94 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 NARS2Q96I59 477 aaKnown RBP5.54□□□□□ -1.52
NEK3-201ENST00000550331 METTL26Q96S19 204 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 TP53RKQ96S44 253 aa5.54□□□□□ -1.52
NEK3-201ENST00000550331 RABAC1Q9UI14 185 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms