RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 HEYLQ9NQ87 328 aaPredicted RBP10.23□□□□□ -0.77
NUP188-211ENST00000550219 U3KQ87 197 aa10.23□□□□□ -0.77
NUP188-211ENST00000550219 HUWE1Q7Z6Z7 4374 aaKnown RBP10.23□□□□□ -0.77
NUP188-211ENST00000550219 WRBO00258 174 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 SSSCA1O60232 199 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 DEDDO75618 318 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 MPC2O95563 127 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 REG1AP05451 166 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 RNASE2P10153 161 aaKnown RBP10.22□□□□□ -0.77
NUP188-211ENST00000550219 IAPPP10997 89 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 LYL1P12980 280 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 HTR2BP41595 481 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 ZFAND6Q6FIF0 208 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 OR1P1Q8NH06 330 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 TMEM170AQ8WVE7 144 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 ST6GAL2Q96JF0 529 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 FANCD2OSQ96PS1 177 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 PEF1Q9UBV8 284 aaKnown RBP10.22□□□□□ -0.77
NUP188-211ENST00000550219 LSM5Q9Y4Y9 91 aaKnown RBP10.22□□□□□ -0.77
NUP188-211ENST00000550219 DMRT1Q9Y5R6 373 aa10.22□□□□□ -0.77
NUP188-211ENST00000550219 F11RQ9Y624 299 aaKnown RBP10.22□□□□□ -0.77
NUP188-211ENST00000550219 TRAV14DV4A0A0A6YYC5 116 aa10.21□□□□□ -0.77
NUP188-211ENST00000550219 TRBV9A0A0B4J1U6 114 aa10.21□□□□□ -0.77
NUP188-211ENST00000550219 G3V3Q6 166 aa10.21□□□□□ -0.77
NUP188-211ENST00000550219 RLN2P04090 185 aa10.21□□□□□ -0.77
NUP188-211ENST00000550219 MFAP2P55001 183 aa10.21□□□□□ -0.77
NUP188-211ENST00000550219 S100A10P60903 97 aa10.21□□□□□ -0.77
NUP188-211ENST00000550219 RPEL1Q2QD12 228 aa10.21□□□□□ -0.77
NUP188-211ENST00000550219 C2orf83Q53S99 150 aa10.21□□□□□ -0.77
NUP188-211ENST00000550219 C19orf35Q6ZS72 473 aa10.21□□□□□ -0.77
NUP188-211ENST00000550219 Q8N1Y9 231 aa10.21□□□□□ -0.77
NUP188-211ENST00000550219 SLC24A4Q8NFF2 622 aa10.21□□□□□ -0.77
NUP188-211ENST00000550219 OR1L6Q8NGR2 347 aa10.21□□□□□ -0.77
NUP188-211ENST00000550219 GAR1Q9NY12 217 aaKnown RBP10.21□□□□□ -0.77
NUP188-211ENST00000550219 IGLV11-55A0A075B6I3 123 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 C15orf62A8K5M9 175 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 TSC22D2O75157 780 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 PRH1P02810 166 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 NPY1RP25929 384 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 SNCAP37840 140 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 FGL1Q08830 312 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 EXOSC2Q13868 293 aaKnown RBP10.2□□□□□ -0.78
NUP188-211ENST00000550219 KLF5Q13887 457 aaPredicted RBP10.2□□□□□ -0.78
NUP188-211ENST00000550219 LRRC37A5PQ49AS3 106 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 Q5BKY6 102 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 PRSS54Q6PEW0 395 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 TMEM14EPQ6UXP3 125 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 OR2T35Q8NGX2 323 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 TM2D3Q9BRN9 247 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 PSENENQ9NZ42 101 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 OR5AC2Q9NZP5 309 aa10.2□□□□□ -0.78
NUP188-211ENST00000550219 E5RGE8 158 aa10.19□□□□□ -0.78
NUP188-211ENST00000550219 CCNKO75909 580 aa10.19□□□□□ -0.78
NUP188-211ENST00000550219 PET100P0DJ07 73 aa10.19□□□□□ -0.78
NUP188-211ENST00000550219 SLC25A4P12235 298 aa10.19□□□□□ -0.78
NUP188-211ENST00000550219 HIST1H1BP16401 226 aaKnown RBP10.19□□□□□ -0.78
NUP188-211ENST00000550219 PVALBP20472 110 aaPredicted RBP10.19□□□□□ -0.78
NUP188-211ENST00000550219 SUB1P53999 127 aaKnown RBP eCLIP10.19□□□□□ -0.78
NUP188-211ENST00000550219 RPP30P78346 268 aaKnown RBP10.19□□□□□ -0.78
NUP188-211ENST00000550219 RHOGP84095 191 aa10.19□□□□□ -0.78
NUP188-211ENST00000550219 LCN12Q6JVE5 192 aa10.19□□□□□ -0.78
NUP188-211ENST00000550219 ZNF343Q6P1L6 599 aa10.19□□□□□ -0.78
NUP188-211ENST00000550219 GTSCR1Q86UQ5 136 aa10.19□□□□□ -0.78
NUP188-211ENST00000550219 NOXA1Q86UR1 476 aa10.19□□□□□ -0.78
NUP188-211ENST00000550219 TCTE3Q8IZS6 198 aa10.19□□□□□ -0.78
NUP188-211ENST00000550219 USMG5Q96IX5 58 aa10.19□□□□□ -0.78
NUP188-211ENST00000550219 CITED4Q96RK1 184 aa10.19□□□□□ -0.78
NUP188-211ENST00000550219 LYRM2Q9NU23 88 aaPredicted RBP10.19□□□□□ -0.78
NUP188-211ENST00000550219 PMS2P5A8MQ11 134 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 L7N2F9 121 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 CYB5BO43169 146 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 IFNA10P01566 189 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 DEFA4P12838 97 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 P2RY1P47900 373 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 VAMP2P63027 116 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 SPANXN5Q5MJ07 72 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 SLC25A24Q6NUK1 477 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 IL34Q6ZMJ4 242 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 AKAP14Q86UN6 197 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 NECAP1Q8NC96 275 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 RNASEH2CQ8TDP1 164 aaKnown RBP10.18□□□□□ -0.78
NUP188-211ENST00000550219 NEURL2Q9BR09 285 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 TUBA4BQ9H853 241 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 C19orf73Q9NVV2 129 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 MBD2Q9UBB5 411 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 STRAPQ9Y3F4 350 aaKnown RBP10.18□□□□□ -0.78
NUP188-211ENST00000550219 SORL1Q92673 2214 aa10.18□□□□□ -0.78
NUP188-211ENST00000550219 STAB2Q8WWQ8 2551 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 IZUMO1RA6ND01 250 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 FAM223BA6NKX1 122 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 PRSS46E5RG02 174 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 H3BP45 60 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 I3L2K1 104 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 CORTO00230 105 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 CSN3P07498 182 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 RAB11AP62491 216 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 FAM223AQ8IWN6 122 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 THAP6Q8TBB0 222 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 SPATA25Q9BR10 227 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 THYN1Q9P016 225 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms