RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CDC42P60953 191 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 NCALDP61601 193 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 ZNF90Q03938 601 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 TMEM78Q5T7P6 136 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 DCUN1D2Q6PH85 259 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 AGTRAPQ6RW13 159 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 RPP25LQ8N5L8 163 aaKnown RBP1.38□□□□□ -2.19
CCDC38-208ENST00000549876 Q8NDZ9 215 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 MRPS24Q96EL2 167 aaKnown RBP1.38□□□□□ -2.19
CCDC38-208ENST00000549876 AIF1LQ9BQI0 150 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 Q9BRP9 147 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 PBDC1Q9BVG4 233 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 IMUPQ9GZP8 106 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 SPANXCQ9NY87 97 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 NAT8Q9UHE5 227 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 SSR3Q9UNL2 185 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 SLC35A3Q9Y2D2 325 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 SLIT2O94813 1529 aa1.38□□□□□ -2.19
CCDC38-208ENST00000549876 HECW1Q76N89 1606 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 TRPM6Q9BX84 2022 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 TRAV41A0A0B4J266 112 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 MAP1LC3B2A6NCE7 125 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 E7EQ34 232 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 H7C2G1 150 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 J3QRE1 110 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 SLC22A1O15245 554 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 MFSD11O43934 449 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 RPS4Y1P22090 263 aaKnown RBP1.37□□□□□ -2.19
CCDC38-208ENST00000549876 FUSP35637 526 aaKnown RBP eCLIP1.37□□□□□ -2.19
CCDC38-208ENST00000549876 ATP5G3P48201 142 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 GTF2A1P52655 376 aaPredicted RBP1.37□□□□□ -2.19
CCDC38-208ENST00000549876 FXYD2P54710 66 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 PIGPP57054 158 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 YPEL3P61236 119 aaPredicted RBP1.37□□□□□ -2.19
CCDC38-208ENST00000549876 GNG5P63218 68 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 LYRM7Q5U5X0 104 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 LCA10Q71F78 164 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 MIR17HGQ75NE6 70 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 CLVS1Q8IUQ0 354 aaPredicted RBP1.37□□□□□ -2.19
CCDC38-208ENST00000549876 FAM24BQ8N5W8 94 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 NUP35Q8NFH5 326 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 OR51T1Q8NGJ9 327 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 OR10K1Q8NGX5 313 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 TERB2Q8NHR7 220 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 PLEKHB2Q96CS7 222 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 SCGB3A1Q96QR1 104 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 SERPINI1Q99574 410 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 MAP1LC3BQ9GZQ8 125 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 SLC39A9Q9NUM3 307 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 NDUFB11Q9NX14 153 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 LAMTOR3Q9UHA4 124 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 GINS2Q9Y248 185 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 ERGIC3Q9Y282 383 aa1.37□□□□□ -2.19
CCDC38-208ENST00000549876 UBR2Q8IWV8 1755 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 TOPBP1Q92547 1522 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 VIRMAQ69YN4 1812 aaKnown RBP1.36□□□□□ -2.19
CCDC38-208ENST00000549876 SLX4Q8IY92 1834 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 SCN10AQ9Y5Y9 1956 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 IGHV1-18A0A0C4DH31 117 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 PRORSD1PA6NEY8 169 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 CLDN25C9JDP6 229 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 TRAPPC2LH3BP13 241 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 J3QKU1 62 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 FAM107AO95990 144 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 S100A4P26447 101 aaKnown RBP1.36□□□□□ -2.19
CCDC38-208ENST00000549876 SS18Q15532 418 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 LINC01554Q52M75 96 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 TMEM128Q5BJH2 165 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 TRAPPC6BQ86SZ2 158 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 C10orf126Q8N4M7 172 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 PFN4Q8NHR9 129 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 C11orf40Q8WZ69 217 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 DNAJC30Q96LL9 226 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 LYSMD1Q96S90 227 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 TMEM133Q9H2Q1 129 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 PRO2289Q9P1D8 64 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 SS18L2Q9UHA2 77 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 AMMECR1Q9Y4X0 333 aaPredicted RBP1.36□□□□□ -2.19
CCDC38-208ENST00000549876 MAST2Q6P0Q8 1798 aa1.36□□□□□ -2.19
CCDC38-208ENST00000549876 WDR90Q96KV7 1748 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 UHRF1BP1Q6BDS2 1440 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 TRBV10-2A0A0K0K1G8 114 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 DUXBA0A1W2PPF3 345 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 SDHAF1A6NFY7 115 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 RIIAD1A6NNX1 92 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 DHFRP00374 187 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 PPBPP02775 128 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 HINT1P49773 126 aaPredicted RBP1.35□□□□□ -2.19
CCDC38-208ENST00000549876 DEFA3P59666 94 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 SUPT4H1P63272 117 aaKnown RBP1.35□□□□□ -2.19
CCDC38-208ENST00000549876 SMCO1Q147U7 214 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 RHEBQ15382 184 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 KISS1Q15726 138 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 RRN3P1Q2M238 152 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 SAMD13Q5VXD3 122 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 KTN1-AS1Q86SY8 53 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 ANGPTL5Q86XS5 388 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 HIST3H2BBQ8N257 126 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 OR10J5Q8NHC4 309 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 DNAJC9Q8WXX5 260 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms