RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 TRGC1P0CF51 173 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 IFI30P13284 250 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 SPI1P17947 270 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 PHBP35232 272 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 CRYBA4P53673 196 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 GNG3P63215 75 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 GNG5P63218 68 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 TPRXLQ17RH7 258 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 LINC01554Q52M75 96 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 C3orf33Q6P1S2 294 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 DPPA3Q6W0C5 159 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 ZNF439Q8NDP4 499 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 PFN4Q8NHR9 129 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 ZHX1-C8orf76Q96EF9 292 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 GINS3Q9BRX5 216 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 TMEM70Q9BUB7 260 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 TIMM21Q9BVV7 248 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 TTTY12Q9BZ98 90 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 BIN3Q9NQY0 253 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 OSTCQ9NRP0 149 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 CKLFQ9UBR5 152 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 UFC1Q9Y3C8 167 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 GREB1Q4ZG55 1949 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 FMN1Q68DA7 1419 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 MIA2Q96PC5 1412 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 TOPBP1Q92547 1522 aa1.81□□□□□ -2.12
SNRPF-202ENST00000549580 KIF1BO60333 1816 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 A0A087X0T9 212 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 A0A0D9SG52 128 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 C1orf196B1AJZ1 125 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 H7C1C5 153 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 TCL1BO95988 128 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 LCN6P62502 163 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 DR1Q01658 176 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 SLC38A11Q08AI6 406 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 RHEBQ15382 184 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 TSNQ15631 228 aaKnown RBP1.8□□□□□ -2.12
SNRPF-202ENST00000549580 KHDC3LQ587J8 217 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 KRTAP13-1Q8IUC0 172 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 SMIM20Q8N5G0 67 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 SIGLECL1Q8N7X8 197 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 WFDC11Q8NEX6 87 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 OR52R1Q8NGF1 315 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 TXNDC17Q9BRA2 123 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 PBDC1Q9BVG4 233 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 SH3BGRL3Q9H299 93 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 CENPHQ9H3R5 247 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 C8orf4Q9NR00 106 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 LYRM2Q9NU23 88 aaPredicted RBP1.8□□□□□ -2.12
SNRPF-202ENST00000549580 SSR3Q9UNL2 185 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 BAIAP2Q9UQB8 552 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 RTEL1-TNFRSF6BF6WH68 1400 aa1.8□□□□□ -2.12
SNRPF-202ENST00000549580 DENND4BO75064 1496 aaPredicted RBP1.8□□□□□ -2.12
SNRPF-202ENST00000549580 SCAF11Q99590 1463 aaKnown RBP1.8□□□□□ -2.12
SNRPF-202ENST00000549580 ICE1Q9Y2F5 2266 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 ZNF860A6NHJ4 632 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 ZNF705FA8MVS1 300 aaPredicted RBP1.79□□□□□ -2.12
SNRPF-202ENST00000549580 PPP5D1E7EU14 171 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 SDCBPO00560 298 aaPredicted RBP1.79□□□□□ -2.12
SNRPF-202ENST00000549580 PGLYRP1O75594 196 aaPredicted RBP1.79□□□□□ -2.12
SNRPF-202ENST00000549580 HTR1AP08908 422 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 P0DMU3 169 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 FAM231AP0DMU4 169 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 FAM231CP0DMU5 169 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 SRIP30626 198 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 AQP4P55087 323 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 SCGB2B2Q4G0G5 96 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 AAED1Q7RTV5 226 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 STX19Q8N4C7 294 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.79□□□□□ -2.12
SNRPF-202ENST00000549580 OR8D4Q8NGM9 314 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 SERPINI1Q99574 410 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 PCBD2Q9H0N5 130 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 ACER3Q9NUN7 267 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 MED29Q9NX70 200 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 SS18L2Q9UHA2 77 aa1.79□□□□□ -2.12
SNRPF-202ENST00000549580 AMMECR1Q9Y4X0 333 aaPredicted RBP1.79□□□□□ -2.12
SNRPF-202ENST00000549580 MALRD1Q5VYJ5 2156 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 FCGBPQ9Y6R7 5405 aaPredicted RBP1.78□□□□□ -2.12
SNRPF-202ENST00000549580 ORC5O43913 435 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 BANF1O75531 89 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 NAPSAO96009 420 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 IGKV1-16P04430 117 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 RPSAP08865 295 aaKnown RBP1.78□□□□□ -2.12
SNRPF-202ENST00000549580 IDO1P14902 403 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 SERPINB1P30740 379 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 SRP14P37108 136 aaKnown RBP1.78□□□□□ -2.12
SNRPF-202ENST00000549580 EIF5AP63241 154 aaKnown RBP1.78□□□□□ -2.12
SNRPF-202ENST00000549580 RRN3P1Q2M238 152 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 SMIM15Q7Z3B0 74 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 GRINAQ7Z429 371 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 DHFR2Q86XF0 187 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 C10orf126Q8N4M7 172 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 OR8B3Q8NGG8 313 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 OR5A1Q8NGJ0 315 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 DCANP1Q8TF63 244 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 GPER1Q99527 375 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 TMEM106BQ9NUM4 274 aa1.78□□□□□ -2.12
SNRPF-202ENST00000549580 MYH11P35749 1972 aa1.78□□□□□ -2.13
SNRPF-202ENST00000549580 CPAMD8Q8IZJ3 1885 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms