RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 NPIPB6E9PJ23 425 aa3.85□□□□□ -1.79
APP-217ENST00000548570 H3BUA1 57 aa3.85□□□□□ -1.79
APP-217ENST00000548570 TSC22D2O75157 780 aa3.85□□□□□ -1.79
APP-217ENST00000548570 DEDDO75618 318 aa3.85□□□□□ -1.79
APP-217ENST00000548570 MPC2O95563 127 aa3.85□□□□□ -1.79
APP-217ENST00000548570 MT-CO2P00403 227 aa3.85□□□□□ -1.79
APP-217ENST00000548570 IGHV3-11P01762 117 aa3.85□□□□□ -1.79
APP-217ENST00000548570 IGHV3-23P01764 117 aa3.85□□□□□ -1.79
APP-217ENST00000548570 TRGV3P03979 118 aa3.85□□□□□ -1.79
APP-217ENST00000548570 GIPP09681 153 aaPredicted RBP3.85□□□□□ -1.79
APP-217ENST00000548570 CDX1P47902 265 aaPredicted RBP3.85□□□□□ -1.79
APP-217ENST00000548570 RPL23AP62750 156 aaKnown RBP3.85□□□□□ -1.79
APP-217ENST00000548570 TMEM267Q0VDI3 215 aaPredicted RBP3.85□□□□□ -1.79
APP-217ENST00000548570 LRRC37A5PQ49AS3 106 aa3.85□□□□□ -1.79
APP-217ENST00000548570 ZNF343Q6P1L6 599 aa3.85□□□□□ -1.79
APP-217ENST00000548570 TEX38Q6PEX7 206 aa3.85□□□□□ -1.79
APP-217ENST00000548570 HSD17B13Q7Z5P4 300 aaPredicted RBP3.85□□□□□ -1.79
APP-217ENST00000548570 MRPL41Q8IXM3 137 aaKnown RBP3.85□□□□□ -1.79
APP-217ENST00000548570 COMMD1Q8N668 190 aa3.85□□□□□ -1.79
APP-217ENST00000548570 TMEM252Q8N6L7 170 aa3.85□□□□□ -1.79
APP-217ENST00000548570 SLC24A4Q8NFF2 622 aa3.85□□□□□ -1.79
APP-217ENST00000548570 ZNF502Q8TBZ5 544 aa3.85□□□□□ -1.79
APP-217ENST00000548570 SCARB1Q8WTV0 552 aa3.85□□□□□ -1.79
APP-217ENST00000548570 DUX3Q96PT4 197 aa3.85□□□□□ -1.79
APP-217ENST00000548570 OR5B12Q96R08 314 aa3.85□□□□□ -1.79
APP-217ENST00000548570 NEURL2Q9BR09 285 aa3.85□□□□□ -1.79
APP-217ENST00000548570 RANGRFQ9HD47 186 aaPredicted RBP3.85□□□□□ -1.79
APP-217ENST00000548570 HEYLQ9NQ87 328 aaPredicted RBP3.85□□□□□ -1.79
APP-217ENST00000548570 FBXL7Q9UJT9 491 aa3.85□□□□□ -1.79
APP-217ENST00000548570 LSM5Q9Y4Y9 91 aaKnown RBP3.85□□□□□ -1.79
APP-217ENST00000548570 U3KQ87 197 aa3.85□□□□□ -1.79
APP-217ENST00000548570 C2CD3Q4AC94 2353 aa3.84□□□□□ -1.79
APP-217ENST00000548570 DOCK11Q5JSL3 2073 aa3.84□□□□□ -1.79
APP-217ENST00000548570 IGHV4OR15-8A0A075B7B6 117 aa3.84□□□□□ -1.79
APP-217ENST00000548570 A0A087WW49 117 aa3.84□□□□□ -1.79
APP-217ENST00000548570 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.84□□□□□ -1.79
APP-217ENST00000548570 PIGBOS1A0A0B4J2F0 54 aa3.84□□□□□ -1.79
APP-217ENST00000548570 TCRBV4S1A1TA0A5B7 111 aa3.84□□□□□ -1.79
APP-217ENST00000548570 RNF222A6NCQ9 220 aa3.84□□□□□ -1.79
APP-217ENST00000548570 BMPR1BO00238 502 aa3.84□□□□□ -1.79
APP-217ENST00000548570 CTSGP08311 255 aa3.84□□□□□ -1.79
APP-217ENST00000548570 EDN2P20800 178 aa3.84□□□□□ -1.79
APP-217ENST00000548570 NPY1RP25929 384 aa3.84□□□□□ -1.79
APP-217ENST00000548570 HTR2BP41595 481 aa3.84□□□□□ -1.79
APP-217ENST00000548570 BCAP31P51572 246 aa3.84□□□□□ -1.79
APP-217ENST00000548570 TPPP2P59282 170 aa3.84□□□□□ -1.79
APP-217ENST00000548570 TAS2R30P59541 319 aa3.84□□□□□ -1.79
APP-217ENST00000548570 S100A10P60903 97 aa3.84□□□□□ -1.79
APP-217ENST00000548570 SLC35B1P78383 322 aa3.84□□□□□ -1.79
APP-217ENST00000548570 ERHP84090 104 aaKnown RBP3.84□□□□□ -1.79
APP-217ENST00000548570 NHLH2Q02577 135 aa3.84□□□□□ -1.79
APP-217ENST00000548570 CD69Q07108 199 aa3.84□□□□□ -1.79
APP-217ENST00000548570 FHL3Q13643 280 aa3.84□□□□□ -1.79
APP-217ENST00000548570 GAMTQ14353 236 aa3.84□□□□□ -1.79
APP-217ENST00000548570 DEFB136Q30KP8 78 aa3.84□□□□□ -1.79
APP-217ENST00000548570 C15orf32Q32M92 178 aa3.84□□□□□ -1.79
APP-217ENST00000548570 SPANXN5Q5MJ07 72 aa3.84□□□□□ -1.79
APP-217ENST00000548570 SLC25A24Q6NUK1 477 aa3.84□□□□□ -1.79
APP-217ENST00000548570 PRSS54Q6PEW0 395 aa3.84□□□□□ -1.79
APP-217ENST00000548570 PET117Q6UWS5 81 aa3.84□□□□□ -1.79
APP-217ENST00000548570 TMEM182Q6ZP80 229 aaPredicted RBP3.84□□□□□ -1.79
APP-217ENST00000548570 NECAP1Q8NC96 275 aa3.84□□□□□ -1.79
APP-217ENST00000548570 UBE2E2Q96LR5 201 aa3.84□□□□□ -1.79
APP-217ENST00000548570 RAB40CQ96S21 281 aa3.84□□□□□ -1.79
APP-217ENST00000548570 CHRDL1Q9BU40 450 aa3.84□□□□□ -1.79
APP-217ENST00000548570 PDCD10Q9BUL8 212 aa3.84□□□□□ -1.79
APP-217ENST00000548570 SLA2Q9H6Q3 261 aa3.84□□□□□ -1.79
APP-217ENST00000548570 WFDC1Q9HC57 220 aa3.84□□□□□ -1.79
APP-217ENST00000548570 ZNF355PQ9NSJ1 428 aa3.84□□□□□ -1.79
APP-217ENST00000548570 LYRM2Q9NU23 88 aaPredicted RBP3.84□□□□□ -1.79
APP-217ENST00000548570 PSENENQ9NZ42 101 aa3.84□□□□□ -1.79
APP-217ENST00000548570 MBD2Q9UBB5 411 aa3.84□□□□□ -1.79
APP-217ENST00000548570 VWFP04275 2813 aa3.83□□□□□ -1.8
APP-217ENST00000548570 A0A1W2PRX2 142 aa3.83□□□□□ -1.8
APP-217ENST00000548570 FAM223BA6NKX1 122 aa3.83□□□□□ -1.8
APP-217ENST00000548570 PPP5D1E7EU14 171 aa3.83□□□□□ -1.8
APP-217ENST00000548570 MED6O75586 246 aa3.83□□□□□ -1.8
APP-217ENST00000548570 CST7O76096 145 aa3.83□□□□□ -1.8
APP-217ENST00000548570 IFNA10P01566 189 aa3.83□□□□□ -1.8
APP-217ENST00000548570 IGKV1-17P01599 117 aa3.83□□□□□ -1.8
APP-217ENST00000548570 CLEC3BP05452 202 aa3.83□□□□□ -1.8
APP-217ENST00000548570 LGALS1P09382 135 aaKnown RBP3.83□□□□□ -1.8
APP-217ENST00000548570 METTL15P1P0C7V9 234 aa3.83□□□□□ -1.8
APP-217ENST00000548570 SLC25A4P12235 298 aa3.83□□□□□ -1.8
APP-217ENST00000548570 DEFA4P12838 97 aa3.83□□□□□ -1.8
APP-217ENST00000548570 HIST1H1BP16401 226 aaKnown RBP3.83□□□□□ -1.8
APP-217ENST00000548570 CXCL2P19875 107 aa3.83□□□□□ -1.8
APP-217ENST00000548570 FCGR2BP31994 310 aaPredicted RBP3.83□□□□□ -1.8
APP-217ENST00000548570 SNCAP37840 140 aa3.83□□□□□ -1.8
APP-217ENST00000548570 P2RY1P47900 373 aa3.83□□□□□ -1.8
APP-217ENST00000548570 RAP2BP61225 183 aa3.83□□□□□ -1.8
APP-217ENST00000548570 CYCSP99999 105 aaKnown RBP3.83□□□□□ -1.8
APP-217ENST00000548570 RUNX1Q01196 453 aa3.83□□□□□ -1.8
APP-217ENST00000548570 EWSR1Q01844 656 aaKnown RBP eCLIP3.83□□□□□ -1.8
APP-217ENST00000548570 ATP5G2Q06055 141 aa3.83□□□□□ -1.8
APP-217ENST00000548570 EXOSC2Q13868 293 aaKnown RBP3.83□□□□□ -1.8
APP-217ENST00000548570 VWC2Q2TAL6 325 aa3.83□□□□□ -1.8
APP-217ENST00000548570 UNQ9165/PRO28630Q6UXU0 137 aa3.83□□□□□ -1.8
APP-217ENST00000548570 IL34Q6ZMJ4 242 aa3.83□□□□□ -1.8
APP-217ENST00000548570 ADAMTSL5Q6ZMM2 481 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms