RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 WFDC9Q8NEX5 89 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 OR9I1Q8NGQ6 314 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 RPS4Y2Q8TD47 263 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 RNASEH2CQ8TDP1 164 aaKnown RBP2.27□□□□□ -2.05
PTCH1-216ENST00000548379 RXFP4Q8TDU9 374 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 SLC7A6Q92536 515 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 CCL13Q99616 98 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 B9D2Q9BPU9 175 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 PRSS27Q9BQR3 290 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF426Q9BUY5 554 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 CDCA4Q9BXL8 241 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 NMNAT1Q9HAN9 279 aaPredicted RBP2.27□□□□□ -2.05
PTCH1-216ENST00000548379 SLC7A11Q9UPY5 501 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 NDUFAF1Q9Y375 327 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 U3KQK5 164 aa2.27□□□□□ -2.05
PTCH1-216ENST00000548379 DSCAMO60469 2012 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 IGHV3OR15-7A0A075B7D8 119 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 C7orf66A4D0T2 115 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 CD300LBA8K4G0 201 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 K7EIL1 84 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 M0R135 149 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 ADAP1O75689 374 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 APOC1P02654 83 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 CD14P08571 375 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 TSPAN19P0C672 248 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 CTLA4P16410 223 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 HSD11B1P28845 292 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 GABRA2P47869 451 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 OR1E2P47887 323 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 TGM4P49221 684 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 OR10A3P58181 314 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 MTPNP58546 118 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 CTAG1AP78358 180 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 CD164Q04900 197 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 PRKCDQ05655 676 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF616Q08AN1 781 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 KLRD1Q13241 179 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 KRR1Q13601 381 aaKnown RBP2.26□□□□□ -2.05
PTCH1-216ENST00000548379 RAB31Q13636 194 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 TRAM1Q15629 374 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 KRTAP13-2Q52LG2 175 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 OR10J3Q5JRS4 329 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 SYT6Q5T7P8 510 aaPredicted RBP2.26□□□□□ -2.05
PTCH1-216ENST00000548379 DRAM2Q6UX65 266 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 UNQ9165/PRO28630Q6UXU0 137 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 CCDC121Q6ZUS5 278 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 MSRB3Q8IXL7 192 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 GAPTQ8N292 157 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 FAM216BQ8N7L0 139 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 GPR32P1Q8NGA4 272 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 OR4D11Q8NGI4 311 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 OR13D1Q8NGV5 346 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 OR10A6Q8NH74 314 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 Q96M85 177 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 OR52B2Q96RD2 323 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 CGREF1Q99674 301 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 WFDC6Q9BQY6 131 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 TMEM109Q9BVC6 243 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 RTL8AQ9BWD3 113 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 SCRT1Q9BWW7 348 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 ABCB9Q9NP78 766 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 RBFOX1Q9NWB1 397 aaKnown RBP2.26□□□□□ -2.05
PTCH1-216ENST00000548379 NAGKQ9UJ70 344 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF391Q9UJN7 358 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 FAM32AQ9Y421 112 aaKnown RBP2.26□□□□□ -2.05
PTCH1-216ENST00000548379 NCKAP5O14513 1909 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 MGAM2Q2M2H8 2515 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 TLN2Q9Y4G6 2542 aa2.26□□□□□ -2.05
PTCH1-216ENST00000548379 TMEM210A6NLX4 147 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 A8MUU9 505 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 VGLL3A8MV65 326 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 J3QT63 122 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 CRXO43186 299 aaPredicted RBP2.25□□□□□ -2.05
PTCH1-216ENST00000548379 SYNGR1O43759 233 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 ZNF682O95780 498 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 LHBP01229 141 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 IGLV2-8P01709 118 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 HLA-DQB1P01920 261 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 MT-ND4P03905 459 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 PET100P0DJ07 73 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 PAX6P26367 422 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 SLC6A1P30531 599 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 BRS3P32247 399 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 IFNGR2P38484 337 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 CDC34P49427 236 aaPredicted RBP2.25□□□□□ -2.05
PTCH1-216ENST00000548379 CAV3P56539 151 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 RAB25P57735 213 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 GRB2P62993 217 aaKnown RBP2.25□□□□□ -2.05
PTCH1-216ENST00000548379 SELENOWP63302 87 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 HIST1H3AP68431 136 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 PITPNAQ00169 270 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 PRB3Q04118 309 aaPredicted RBP2.25□□□□□ -2.05
PTCH1-216ENST00000548379 PRSS8Q16651 343 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 CDNFQ49AH0 187 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 MESTQ5EB52 335 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 GLYATL3Q5SZD4 288 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 IDNKQ5T6J7 187 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 HIST2H3PS2Q5TEC6 136 aa2.25□□□□□ -2.05
PTCH1-216ENST00000548379 FAM222AQ5U5X8 452 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms