RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 LGI3Q8N145 548 aa11.46□□□□□ -0.57
SSH1-204ENST00000546697 DUSP18Q8NEJ0 188 aa11.46□□□□□ -0.57
SSH1-204ENST00000546697 RNASEH2CQ8TDP1 164 aaKnown RBP11.46□□□□□ -0.57
SSH1-204ENST00000546697 TMEM170AQ8WVE7 144 aa11.46□□□□□ -0.57
SSH1-204ENST00000546697 SDHCQ99643 169 aaPredicted RBP11.46□□□□□ -0.57
SSH1-204ENST00000546697 ZFAND3Q9H8U3 227 aa11.46□□□□□ -0.57
SSH1-204ENST00000546697 SMPXQ9UHP9 88 aa11.46□□□□□ -0.57
SSH1-204ENST00000546697 DYNC2H1Q8NCM8 4307 aaKnown RBP11.46□□□□□ -0.58
SSH1-204ENST00000546697 IGHV7-4-1A0A0J9YVY3 117 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 A0A1B0GU03 582 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 NAP1L6A6NFF2 107 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 OR11H12B2RN74 326 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 GNG7O60262 68 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 CLN5O75503 358 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 HOXA1P49639 335 aaPredicted RBP11.45□□□□□ -0.58
SSH1-204ENST00000546697 TNFRSF9Q07011 255 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 SPINK9Q5DT21 86 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 FAM90A2PQ658T7 463 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 ZNF600Q6ZNG1 722 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 LINC00299Q6ZSB3 139 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 TMEM116Q8NCL8 245 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 RNASE11Q8TAA1 199 aaKnown RBP11.45□□□□□ -0.58
SSH1-204ENST00000546697 CITED4Q96RK1 184 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 SPATA25Q9BR10 227 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 VSIRQ9H7M9 311 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 EDA2RQ9HAV5 297 aa11.45□□□□□ -0.58
SSH1-204ENST00000546697 RBMY1BA6NDE4 496 aaKnown RBP11.44□□□□□ -0.58
SSH1-204ENST00000546697 RBMY1EA6NEQ0 496 aaKnown RBP11.44□□□□□ -0.58
SSH1-204ENST00000546697 CHEK1O14757 476 aa11.44□□□□□ -0.58
SSH1-204ENST00000546697 CD5P06127 495 aa11.44□□□□□ -0.58
SSH1-204ENST00000546697 RBMY1DP0C7P1 496 aaKnown RBP11.44□□□□□ -0.58
SSH1-204ENST00000546697 AKR1C4P17516 323 aa11.44□□□□□ -0.58
SSH1-204ENST00000546697 SMCO1Q147U7 214 aa11.44□□□□□ -0.58
SSH1-204ENST00000546697 RBMS2Q15434 407 aaKnown RBP11.44□□□□□ -0.58
SSH1-204ENST00000546697 BAK1Q16611 211 aa11.44□□□□□ -0.58
SSH1-204ENST00000546697 GUCA2BQ16661 112 aa11.44□□□□□ -0.58
SSH1-204ENST00000546697 LAMTOR1Q6IAA8 161 aa11.44□□□□□ -0.58
SSH1-204ENST00000546697 LYZL2Q7Z4W2 148 aa11.44□□□□□ -0.58
SSH1-204ENST00000546697 UBAC2Q8NBM4 344 aa11.44□□□□□ -0.58
SSH1-204ENST00000546697 ENY2Q9NPA8 101 aa11.44□□□□□ -0.58
SSH1-204ENST00000546697 MRPL36Q9P0J6 103 aaKnown RBP11.44□□□□□ -0.58
SSH1-204ENST00000546697 U3KQ87 197 aa11.44□□□□□ -0.58
SSH1-204ENST00000546697 TRAV30A0A087WSZ9 112 aa11.43□□□□□ -0.58
SSH1-204ENST00000546697 FAM90A26D6RGX4 464 aa11.43□□□□□ -0.58
SSH1-204ENST00000546697 C3orf84H3BNL1 204 aa11.43□□□□□ -0.58
SSH1-204ENST00000546697 SCAF4O95104 1147 aaKnown RBP11.43□□□□□ -0.58
SSH1-204ENST00000546697 IGKV1-17P01599 117 aa11.43□□□□□ -0.58
SSH1-204ENST00000546697 SLC25A4P12235 298 aa11.43□□□□□ -0.58
SSH1-204ENST00000546697 TOMM20LQ6UXN7 152 aa11.43□□□□□ -0.58
SSH1-204ENST00000546697 RBPMS2Q6ZRY4 209 aaKnown RBP11.43□□□□□ -0.58
SSH1-204ENST00000546697 NOXA1Q86UR1 476 aa11.43□□□□□ -0.58
SSH1-204ENST00000546697 DEFB125Q8N687 156 aa11.43□□□□□ -0.58
SSH1-204ENST00000546697 SLC24A4Q8NFF2 622 aa11.43□□□□□ -0.58
SSH1-204ENST00000546697 PINX1Q96BK5 328 aaKnown RBP11.43□□□□□ -0.58
SSH1-204ENST00000546697 HIPK2Q9H2X6 1198 aa11.43□□□□□ -0.58
SSH1-204ENST00000546697 TUBA4BQ9H853 241 aa11.43□□□□□ -0.58
SSH1-204ENST00000546697 LYSTQ99698 3801 aa11.43□□□□□ -0.58
SSH1-204ENST00000546697 TRAV14DV4A0A0A6YYC5 116 aa11.42□□□□□ -0.58
SSH1-204ENST00000546697 RPS10-NUDT3A0A1W2PQS6 291 aa11.42□□□□□ -0.58
SSH1-204ENST00000546697 NDUFB6O95139 128 aa11.42□□□□□ -0.58
SSH1-204ENST00000546697 OR52B4Q8NGK2 314 aa11.42□□□□□ -0.58
SSH1-204ENST00000546697 C7orf50Q9BRJ6 194 aaKnown RBP11.42□□□□□ -0.58
SSH1-204ENST00000546697 GINS3Q9BRX5 216 aa11.42□□□□□ -0.58
SSH1-204ENST00000546697 RHPN1-AS1Q9BWJ2 59 aa11.42□□□□□ -0.58
SSH1-204ENST00000546697 SRD5A3Q9H8P0 318 aa11.42□□□□□ -0.58
SSH1-204ENST00000546697 HEYLQ9NQ87 328 aaPredicted RBP11.42□□□□□ -0.58
SSH1-204ENST00000546697 TMED3Q9Y3Q3 217 aa11.42□□□□□ -0.58
SSH1-204ENST00000546697 SACSQ9NZJ4 4579 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 TRAV2A0A0B4J234 112 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 SFT2D2O95562 160 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 IGHV3-48P01763 117 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 IGLC1P0CG04 106 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 BTCP35070 178 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 OPRK1P41145 380 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 YPEL3P61236 119 aaPredicted RBP11.41□□□□□ -0.58
SSH1-204ENST00000546697 ODF3L2Q3SX64 289 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 PRSS54Q6PEW0 395 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 CENPSQ8N2Z9 138 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 RNF2Q99496 336 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 C20orf24Q9BUV8 137 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 WFDC10AQ9H1F0 79 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 PRR13Q9NZ81 148 aa11.41□□□□□ -0.58
SSH1-204ENST00000546697 OR4C46A6NHA9 309 aa11.4□□□□□ -0.58
SSH1-204ENST00000546697 NPY1RP25929 384 aa11.4□□□□□ -0.58
SSH1-204ENST00000546697 CRYBB3P26998 211 aa11.4□□□□□ -0.58
SSH1-204ENST00000546697 PPP1R1AQ13522 171 aa11.4□□□□□ -0.58
SSH1-204ENST00000546697 MLANAQ16655 118 aa11.4□□□□□ -0.58
SSH1-204ENST00000546697 CNPY1Q3B7I2 92 aa11.4□□□□□ -0.58
SSH1-204ENST00000546697 DTD1Q8TEA8 209 aa11.4□□□□□ -0.58
SSH1-204ENST00000546697 PUS1Q9Y606 427 aaKnown RBP eCLIP11.4□□□□□ -0.58
SSH1-204ENST00000546697 U3KQE9 123 aa11.4□□□□□ -0.58
SSH1-204ENST00000546697 CEBPZOSA8MTT3 80 aa11.39□□□□□ -0.59
SSH1-204ENST00000546697 SCGB2A1O75556 95 aa11.39□□□□□ -0.59
SSH1-204ENST00000546697 IL7P13232 177 aa11.39□□□□□ -0.59
SSH1-204ENST00000546697 BMI1P35226 326 aa11.39□□□□□ -0.59
SSH1-204ENST00000546697 ETFRF1Q6IPR1 90 aa11.39□□□□□ -0.59
SSH1-204ENST00000546697 TMED4Q7Z7H5 227 aa11.39□□□□□ -0.59
SSH1-204ENST00000546697 OR1S2Q8NGQ3 325 aa11.39□□□□□ -0.59
SSH1-204ENST00000546697 MUC7Q8TAX7 377 aa11.39□□□□□ -0.59
SSH1-204ENST00000546697 RBKSQ9H477 322 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms