RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TRAV18A0A075B6X5 111 aa10.42□□□□□ -0.74
RTN3-214ENST00000545432 CBX5P45973 191 aa10.42□□□□□ -0.74
RTN3-214ENST00000545432 SLC25A38Q96DW6 304 aa10.42□□□□□ -0.74
RTN3-214ENST00000545432 METTL26Q96S19 204 aa10.42□□□□□ -0.74
RTN3-214ENST00000545432 XCL2Q9UBD3 114 aa10.42□□□□□ -0.74
RTN3-214ENST00000545432 ANAPC10Q9UM13 185 aa10.42□□□□□ -0.74
RTN3-214ENST00000545432 IGKV1-39P01597 117 aa10.41□□□□□ -0.74
RTN3-214ENST00000545432 IGKV1D-39P04432 117 aa10.41□□□□□ -0.74
RTN3-214ENST00000545432 ERHP84090 104 aaKnown RBP10.41□□□□□ -0.74
RTN3-214ENST00000545432 LGALS14Q8TCE9 139 aa10.41□□□□□ -0.74
RTN3-214ENST00000545432 GLMPQ8WWB7 406 aa10.41□□□□□ -0.74
RTN3-214ENST00000545432 PINX1Q96BK5 328 aaKnown RBP10.41□□□□□ -0.74
RTN3-214ENST00000545432 NIPSNAP3BQ9BS92 247 aa10.41□□□□□ -0.74
RTN3-214ENST00000545432 DAPK2Q9UIK4 370 aa10.41□□□□□ -0.74
RTN3-214ENST00000545432 SMIM30A4D0T7 59 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 GPR31O00270 319 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 CLN5O75503 358 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 IGKV1-17P01599 117 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 RPL5P46777 297 aaKnown RBP10.4□□□□□ -0.74
RTN3-214ENST00000545432 PPP5CP53041 499 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 AP2S1P53680 142 aaPredicted RBP10.4□□□□□ -0.74
RTN3-214ENST00000545432 HERV-K104P61576 105 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 PSMG4Q5JS54 123 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 SFXN4Q6P4A7 337 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 C16orf54Q6UWD8 224 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 CMTM1Q8IZ96 169 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 C6orf223Q8N319 242 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 OR4X1Q8NH49 305 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 CLUHP3Q96NS8 147 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 TXNL4BQ9NX01 149 aaKnown RBP10.4□□□□□ -0.74
RTN3-214ENST00000545432 MRPL36Q9P0J6 103 aaKnown RBP10.4□□□□□ -0.74
RTN3-214ENST00000545432 RFNGQ9Y644 331 aa10.4□□□□□ -0.74
RTN3-214ENST00000545432 NBDYA0A0U1RRE5 68 aa10.39□□□□□ -0.75
RTN3-214ENST00000545432 HELTA6NFD8 242 aa10.39□□□□□ -0.75
RTN3-214ENST00000545432 HLA-DRB4P13762 266 aa10.39□□□□□ -0.75
RTN3-214ENST00000545432 NAT1P18440 290 aa10.39□□□□□ -0.75
RTN3-214ENST00000545432 RFX2P48378 723 aa10.39□□□□□ -0.75
RTN3-214ENST00000545432 DHRS2Q13268 280 aa10.39□□□□□ -0.75
RTN3-214ENST00000545432 C15orf53Q8NAA6 179 aa10.39□□□□□ -0.75
RTN3-214ENST00000545432 OR5H6Q8NGV6 325 aa10.39□□□□□ -0.75
RTN3-214ENST00000545432 ZNRF2Q8NHG8 242 aa10.39□□□□□ -0.75
RTN3-214ENST00000545432 ZNF2Q9BSG1 426 aaPredicted RBP10.39□□□□□ -0.75
RTN3-214ENST00000545432 YTHDF1Q9BYJ9 559 aaKnown RBP10.39□□□□□ -0.75
RTN3-214ENST00000545432 VCXQ9H320 206 aa10.39□□□□□ -0.75
RTN3-214ENST00000545432 FNDC4Q9H6D8 234 aaPredicted RBP10.39□□□□□ -0.75
RTN3-214ENST00000545432 HLA-DRB4X5D2U9 266 aa10.39□□□□□ -0.75
RTN3-214ENST00000545432 FAM90A26D6RGX4 464 aa10.38□□□□□ -0.75
RTN3-214ENST00000545432 CORTO00230 105 aa10.38□□□□□ -0.75
RTN3-214ENST00000545432 NKX2-1P43699 371 aaPredicted RBP10.38□□□□□ -0.75
RTN3-214ENST00000545432 HOXA1P49639 335 aaPredicted RBP10.38□□□□□ -0.75
RTN3-214ENST00000545432 FAM222AQ5U5X8 452 aa10.38□□□□□ -0.75
RTN3-214ENST00000545432 TSPAN14Q8NG11 270 aa10.38□□□□□ -0.75
RTN3-214ENST00000545432 OR4A16Q8NH70 328 aa10.38□□□□□ -0.75
RTN3-214ENST00000545432 RRP15Q9Y3B9 282 aaKnown RBP10.38□□□□□ -0.75
RTN3-214ENST00000545432 P0C879 139 aa10.37□□□□□ -0.75
RTN3-214ENST00000545432 RNASE2P10153 161 aaKnown RBP10.37□□□□□ -0.75
RTN3-214ENST00000545432 EIF2B2P49770 351 aaKnown RBP10.37□□□□□ -0.75
RTN3-214ENST00000545432 MLANAQ16655 118 aa10.37□□□□□ -0.75
RTN3-214ENST00000545432 BSXQ3C1V8 233 aa10.37□□□□□ -0.75
RTN3-214ENST00000545432 TMEM88Q6PEY1 159 aa10.37□□□□□ -0.75
RTN3-214ENST00000545432 H2BFWTQ7Z2G1 175 aa10.37□□□□□ -0.75
RTN3-214ENST00000545432 NARS2Q96I59 477 aaKnown RBP10.37□□□□□ -0.75
RTN3-214ENST00000545432 FXYD6Q9H0Q3 95 aa10.37□□□□□ -0.75
RTN3-214ENST00000545432 EHFQ9NZC4 300 aa10.37□□□□□ -0.75
RTN3-214ENST00000545432 FAT1Q14517 4588 aa10.37□□□□□ -0.75
RTN3-214ENST00000545432 FCER2P06734 321 aa10.36□□□□□ -0.75
RTN3-214ENST00000545432 SNRPD3P62318 126 aaKnown RBP10.36□□□□□ -0.75
RTN3-214ENST00000545432 NRN1Q9NPD7 142 aa10.36□□□□□ -0.75
RTN3-214ENST00000545432 TRAV30A0A087WSZ9 112 aa10.35□□□□□ -0.75
RTN3-214ENST00000545432 A0A0B4J293 547 aa10.35□□□□□ -0.75
RTN3-214ENST00000545432 SNCAP37840 140 aa10.35□□□□□ -0.75
RTN3-214ENST00000545432 ALDH3B2P48448 385 aa10.35□□□□□ -0.75
RTN3-214ENST00000545432 EMP1P54849 157 aa10.35□□□□□ -0.75
RTN3-214ENST00000545432 C1orf158Q8N1D5 194 aa10.35□□□□□ -0.75
RTN3-214ENST00000545432 ZNF709Q8N972 641 aa10.35□□□□□ -0.75
RTN3-214ENST00000545432 TMEM230Q96A57 120 aa10.35□□□□□ -0.75
RTN3-214ENST00000545432 DIABLOQ9NR28 239 aa10.35□□□□□ -0.75
RTN3-214ENST00000545432 BUB3O43684 328 aa10.34□□□□□ -0.75
RTN3-214ENST00000545432 TMEM127O75204 238 aa10.34□□□□□ -0.75
RTN3-214ENST00000545432 HNRNPCP07910 306 aaKnown RBP eCLIP10.34□□□□□ -0.753e-6■■■□□ 17
RTN3-214ENST00000545432 IGLC1P0CG04 106 aa10.34□□□□□ -0.75
RTN3-214ENST00000545432 AQP4P55087 323 aa10.34□□□□□ -0.75
RTN3-214ENST00000545432 YPEL3P61236 119 aaPredicted RBP10.34□□□□□ -0.75
RTN3-214ENST00000545432 TIGITQ495A1 244 aa10.34□□□□□ -0.75
RTN3-214ENST00000545432 GDF5OSQ5U4N7 250 aa10.34□□□□□ -0.75
RTN3-214ENST00000545432 LPCAT3Q6P1A2 487 aa10.34□□□□□ -0.75
RTN3-214ENST00000545432 SPATA12Q7Z6I5 190 aa10.34□□□□□ -0.75
RTN3-214ENST00000545432 TBC1D26Q86UD7 250 aa10.34□□□□□ -0.75
RTN3-214ENST00000545432 LYSMD2Q8IV50 215 aa10.34□□□□□ -0.75
RTN3-214ENST00000545432 OR6F1Q8NGZ6 308 aa10.34□□□□□ -0.75
RTN3-214ENST00000545432 TMED3Q9Y3Q3 217 aa10.34□□□□□ -0.75
RTN3-214ENST00000545432 BTF3P20290 206 aaKnown RBP10.33□□□□□ -0.76
RTN3-214ENST00000545432 SDC2P34741 201 aa10.33□□□□□ -0.76
RTN3-214ENST00000545432 SUB1P53999 127 aaKnown RBP eCLIP10.33□□□□□ -0.76
RTN3-214ENST00000545432 UCP3P55916 312 aa10.33□□□□□ -0.76
RTN3-214ENST00000545432 MRGPRFQ96AM1 343 aa10.33□□□□□ -0.76
RTN3-214ENST00000545432 SAV1Q9H4B6 383 aaPredicted RBP10.33□□□□□ -0.76
RTN3-214ENST00000545432 YTHDF2Q9Y5A9 579 aaKnown RBP10.33□□□□□ -0.76
RTN3-214ENST00000545432 MEIS3P1A6NDR6 274 aa10.32□□□□□ -0.76
RTN3-214ENST00000545432 SCGB2A1O75556 95 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms