RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 RNASEH2CQ8TDP1 164 aaKnown RBP4.78□□□□□ -1.64
VPS50-220ENST00000544910 ST20Q9HBF5 79 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 F2RL2O00254 374 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 AMBPP02760 352 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 APOBEC3AP31941 199 aaPredicted RBP4.78□□□□□ -1.64
VPS50-220ENST00000544910 SMAGPQ0VAQ4 97 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 FAM90A2PQ658T7 463 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 PRNTQ86SH4 94 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 ZNF414Q96IQ9 312 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 GAFA1Q96PS6 74 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 CLEC7AQ9BXN2 247 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 ATG2AQ2TAZ0 1938 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 PPIAL4CA0A0B4J2A2 164 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 M0QZ24 198 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 PPIAL4GP0DN37 164 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 PYY3Q5JQD4 70 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 CRIP3Q6Q6R5 217 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 LINC00305Q7Z4B0 112 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 RPP25LQ8N5L8 163 aaKnown RBP4.78□□□□□ -1.64
VPS50-220ENST00000544910 CEP192Q8TEP8 1941 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 SERF1AO75920 110 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 TMEM50AO95807 157 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 TSPAN13O95857 204 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 PLAUP00749 431 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 ZNF502Q8TBZ5 544 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 TMEM208Q9BTX3 173 aa4.78□□□□□ -1.64
VPS50-220ENST00000544910 TRAV3A0A0B4J244 114 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 A0A1W2PRD5 423 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 A0A1W2PRF3 423 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 A0A1W2PRM7 423 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 C15orf62A8K5M9 175 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 EFNB3Q15768 340 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 ZNF726P1Q15940 193 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 KIAA1644Q3SXP7 199 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 ACTL10Q5JWF8 245 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 TMEM144Q7Z5S9 345 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 CACNG8Q8WXS5 425 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 NPIPB3Q92617 1050 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 SCNM1Q9BWG6 230 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 MS4A6AQ9H2W1 248 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 SDK1Q7Z5N4 2213 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 H3BUT2 72 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 C1QTNF9P0C862 333 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 TDGF1P3P51864 188 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 UCNP55089 124 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 C3orf36Q3SXR2 165 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 TMEM177Q53S58 311 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 DGAT2L7PQ6IED9 249 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 CCDC144NLQ6NUI1 221 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 DTX1Q86Y01 620 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 PGLYRP4Q96LB8 373 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 GGTLC1Q9BX51 225 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 MRPL16Q9NX20 251 aaKnown RBP4.77□□□□□ -1.65
VPS50-220ENST00000544910 PLA2G2EQ9NZK7 142 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 ADAMTS9Q9P2N4 1935 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 IZUMO1RA6ND01 250 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 PGPA6NDG6 321 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 OR11H12B2RN74 326 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 MOSP00540 346 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 WNT2P09544 360 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 ADMP35318 185 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 GAGE1Q13065 139 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 ZNF841Q6ZN19 808 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 SRCAPQ6ZRS2 3230 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 OR11H1Q8NG94 326 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 OR2K2Q8NGT1 345 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 OR11H2Q8NH07 326 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 ABHD17AQ96GS6 310 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 GNB1LQ9BYB4 327 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 CYSLTR1Q9Y271 337 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 F11RQ9Y624 299 aaKnown RBP4.77□□□□□ -1.65
VPS50-220ENST00000544910 ITGB1BP1O14713 200 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 RIPPLY3P57055 190 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 SSBP4Q9BWG4 385 aaPredicted RBP4.77□□□□□ -1.65
VPS50-220ENST00000544910 CPAMD8Q8IZJ3 1885 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 C7orf71A4D174 169 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 ZNF324O75467 553 aaPredicted RBP4.77□□□□□ -1.65
VPS50-220ENST00000544910 IGHV2-70P01814 119 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 LGALS3P17931 250 aaKnown RBP4.77□□□□□ -1.65
VPS50-220ENST00000544910 SPANXN1Q5VSR9 72 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 Q6ZR03 302 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 OR51G1Q8NGK1 321 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 FAM222BQ8WU58 562 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 HILPDAQ9Y5L2 63 aa4.77□□□□□ -1.65
VPS50-220ENST00000544910 FAM157AC9JC47 383 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 CCL3L1P16619 93 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 LINC00205P59089 165 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 SPATA31B1PQ5VZV4 182 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 PHF3Q92576 2039 aaKnown RBP4.76□□□□□ -1.65
VPS50-220ENST00000544910 A6NNC1 897 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 PEX7O00628 323 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 ATP5LO75964 103 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 GOSR1O95249 250 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 CKS1BP61024 79 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 C2orf83Q53S99 150 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 FMC1Q96HJ9 113 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 EAF1Q96JC9 268 aaPredicted RBP4.76□□□□□ -1.65
VPS50-220ENST00000544910 MRPS16Q9Y3D3 137 aaKnown RBP4.76□□□□□ -1.65
VPS50-220ENST00000544910 A8MWP6 167 aa4.76□□□□□ -1.65
VPS50-220ENST00000544910 FOXH1O75593 365 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms