RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	TNRC6A	Q8NDV7	1962 aa	Known RBP	0.82	□□□□□ -2.28
RAP1B-231	ENST00000544639	TRBV6-7	A0A0A0MS04	114 aa		0.81	□□□□□ -2.28
RAP1B-231	ENST00000544639	TRAV1-1	A0A0B4J248	108 aa		0.81	□□□□□ -2.28
RAP1B-231	ENST00000544639	OR4C46	A6NHA9	309 aa		0.81	□□□□□ -2.28
RAP1B-231	ENST00000544639	SERPINA6	P08185	405 aa		0.81	□□□□□ -2.28
RAP1B-231	ENST00000544639	ZNF93	P35789	620 aa	Predicted RBP	0.81	□□□□□ -2.28
RAP1B-231	ENST00000544639	SPOPL	Q6IQ16	392 aa		0.81	□□□□□ -2.28
RAP1B-231	ENST00000544639	SIGLECL1	Q8N7X8	197 aa		0.81	□□□□□ -2.28
RAP1B-231	ENST00000544639	DCUN1D1	Q96GG9	259 aa		0.81	□□□□□ -2.28
RAP1B-231	ENST00000544639	ULBP3	Q9BZM4	244 aa		0.81	□□□□□ -2.28
RAP1B-231	ENST00000544639	C20orf27	Q9GZN8	174 aa		0.81	□□□□□ -2.28
RAP1B-231	ENST00000544639	ERGIC3	Q9Y282	383 aa		0.81	□□□□□ -2.28
RAP1B-231	ENST00000544639	CLDN24	A6NM45	220 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	NIPSNAP2	O75323	286 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	HYPM	O75409	117 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	OR2J2	O76002	312 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	TCL1B	O95988	128 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	BAALC-AS2	P0C853	105 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	DEFA1	P59665	94 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	CDC42	P60953	191 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	RAB4B	P61018	213 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	PTRHD1	Q6GMV3	140 aa	Known RBP	0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	OOSP2	Q86WS3	158 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	HIST3H2BB	Q8N257	126 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	OTUD6B	Q8N6M0	293 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	CLDN22	Q8N7P3	220 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	LINC00526	Q96FQ7	95 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	OBSCN-AS1	Q96MR7	158 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	TAS2R4	Q9NYW5	299 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	ADCY9	O60503	1353 aa		0.8	□□□□□ -2.28
RAP1B-231	ENST00000544639	TRAV26-2	A0A0B4J265	109 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	PQLC2L	A1A4F0	135 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	CRYZL1	O95825	349 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	TTR	P02766	147 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	SMIM10L2A	P0DMW4	78 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	SMIM10L2B	P0DMW5	78 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	SSR2	P43308	183 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	OR52R1	Q8NGF1	315 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	C8orf76	Q96K31	380 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	ARL5B	Q96KC2	179 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	TMEM147	Q9BVK8	224 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	KLK9	Q9UKQ9	250 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	ZFP30	Q9Y2G7	519 aa		0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	NOSIP	Q9Y314	301 aa	Known RBP	0.79	□□□□□ -2.28
RAP1B-231	ENST00000544639	ZNF106	Q9H2Y7	1883 aa	Known RBP	0.78	□□□□□ -2.28
RAP1B-231	ENST00000544639	SCN3A	Q9NY46	2000 aa		0.78	□□□□□ -2.28
RAP1B-231	ENST00000544639	SMIM23	A6NLE4	172 aa		0.78	□□□□□ -2.28
RAP1B-231	ENST00000544639	OR2B3	O76000	313 aa		0.78	□□□□□ -2.28
RAP1B-231	ENST00000544639	UBL3	O95164	117 aa		0.78	□□□□□ -2.28
RAP1B-231	ENST00000544639	RNASE10	Q5GAN6	216 aa	Known RBP	0.78	□□□□□ -2.28
RAP1B-231	ENST00000544639	ZNF418	Q8TF45	676 aa	Predicted RBP	0.78	□□□□□ -2.28
RAP1B-231	ENST00000544639	DCSTAMP	Q9H295	470 aa		0.78	□□□□□ -2.28
RAP1B-231	ENST00000544639	HECW2	Q9P2P5	1572 aa		0.78	□□□□□ -2.29
RAP1B-231	ENST00000544639	TENM3	Q9P273	2699 aa		0.78	□□□□□ -2.29
RAP1B-231	ENST00000544639	CEP192	Q8TEP8	1941 aa		0.77	□□□□□ -2.29
RAP1B-231	ENST00000544639	FAM236D	A0A1B0GTK5	79 aa		0.77	□□□□□ -2.29
RAP1B-231	ENST00000544639	LYZL6	O75951	148 aa		0.77	□□□□□ -2.29
RAP1B-231	ENST00000544639	FAM236C	P0DP71	79 aa		0.77	□□□□□ -2.29
RAP1B-231	ENST00000544639	CNBP	P62633	177 aa	Known RBP	0.77	□□□□□ -2.29
RAP1B-231	ENST00000544639	RHOG	P84095	191 aa		0.77	□□□□□ -2.29
RAP1B-231	ENST00000544639		Q8N814	137 aa		0.77	□□□□□ -2.29
RAP1B-231	ENST00000544639	OSTC	Q9NRP0	149 aa		0.77	□□□□□ -2.29
RAP1B-231	ENST00000544639	HECW1	Q76N89	1606 aa		0.77	□□□□□ -2.29
RAP1B-231	ENST00000544639	LAMB4	A4D0S4	1761 aa		0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	ROBO3	Q96MS0	1386 aa		0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639		M0R2N4	97 aa		0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	KPNA3	O00505	521 aa	Predicted RBP	0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	PIR	O00625	290 aa		0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	CNIH1	O95406	144 aa		0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	RBP1	P09455	135 aa		0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	MGST1	P10620	155 aa	Known RBP	0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	OMP	P47874	163 aa		0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	TRAPPC6B	Q86SZ2	158 aa		0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	C12orf45	Q8N5I9	185 aa	Predicted RBP	0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	SFT2D1	Q8WV19	159 aa		0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	CCDC42	Q96M95	316 aa		0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	ACER3	Q9NUN7	267 aa		0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	PLXND1	Q9Y4D7	1925 aa		0.76	□□□□□ -2.29
RAP1B-231	ENST00000544639	NEO1	Q92859	1461 aa		0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639		A0A087WUJ7	227 aa		0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	TRBV6-8	A0A0A6YYG3	113 aa		0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	TRAV12-1	A0A0B4J245	112 aa		0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	SNRNP200	O75643	2136 aa	Known RBP	0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	IAH1	Q2TAA2	248 aa	Predicted RBP	0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	LINC01554	Q52M75	96 aa		0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	TRAPPC5	Q8IUR0	188 aa		0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	OR13D1	Q8NGV5	346 aa		0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	OR10J5	Q8NHC4	309 aa		0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	GPR146	Q96CH1	333 aa		0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	CCDC90B	Q9GZT6	254 aa		0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	PARVG	Q9HBI0	331 aa		0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	EML5	Q05BV3	1969 aa		0.75	□□□□□ -2.29
RAP1B-231	ENST00000544639	ECM29	Q5VYK3	1845 aa		0.74	□□□□□ -2.29
RAP1B-231	ENST00000544639	SULT1B1	O43704	296 aa		0.74	□□□□□ -2.29
RAP1B-231	ENST00000544639	LYPLA2	O95372	231 aa		0.74	□□□□□ -2.29
RAP1B-231	ENST00000544639	S100A4	P26447	101 aa	Known RBP	0.74	□□□□□ -2.29
RAP1B-231	ENST00000544639	C1orf137	Q5JT78	98 aa		0.74	□□□□□ -2.29
RAP1B-231	ENST00000544639	KRT222	Q8N1A0	295 aa		0.74	□□□□□ -2.29
RAP1B-231	ENST00000544639	OR8J2	Q8NGG1	315 aa		0.74	□□□□□ -2.29
RAP1B-231	ENST00000544639	BORCS7	Q96B45	105 aa		0.74	□□□□□ -2.29

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms