RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 BRI3O95415 125 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 ATP6V1G2O95670 118 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 IGHV1-69P01742 117 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 HBZP02008 142 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 OR10J1P30954 320 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 KDELR2P33947 212 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 CA7P43166 264 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 DAPP51397 102 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 IDH3GP51553 393 aaPredicted RBP0.64□□□□□ -2.31
YBX3-214ENST00000544501 SNAP25P60880 206 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 BTN3A2P78410 334 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 ERHP84090 104 aaKnown RBP0.64□□□□□ -2.31
YBX3-214ENST00000544501 AMTNQ6UX39 209 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 COA5Q86WW8 74 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 CNEP1R1Q8N9A8 125 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 TSTD1Q8NFU3 115 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 STOML3Q8TAV4 291 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 RNF133Q8WVZ7 376 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 TLCD1Q96CP7 247 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 CPNE2Q96FN4 548 aaPredicted RBP0.64□□□□□ -2.31
YBX3-214ENST00000544501 SLC35G5Q96KT7 338 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 MED10Q9BTT4 135 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 TMEM208Q9BTX3 173 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 MRPL32Q9BYC8 188 aaKnown RBP0.64□□□□□ -2.31
YBX3-214ENST00000544501 NDEL1Q9GZM8 345 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 CYSTM1Q9H1C7 97 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 MS4A12Q9NXJ0 267 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 CEP192Q8TEP8 1941 aa0.64□□□□□ -2.31
YBX3-214ENST00000544501 WNK2Q9Y3S1 2297 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 INTS1Q8N201 2190 aaKnown RBP0.63□□□□□ -2.31
YBX3-214ENST00000544501 SCN8AQ9UQD0 1980 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 A0A1W2PQD3 144 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 ERICH2A1L162 156 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 TRPC5OSA6NMA1 111 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 MKRN2OSH3BPM6 223 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 UBE2L6O14933 153 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 GSTZ1O43708 216 aaPredicted RBP0.63□□□□□ -2.31
YBX3-214ENST00000544501 NDUFS6O75380 124 aaKnown RBP0.63□□□□□ -2.31
YBX3-214ENST00000544501 F8A1P23610 371 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 SERPINB10P48595 397 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 HADHBP55084 474 aaKnown RBP0.63□□□□□ -2.31
YBX3-214ENST00000544501 H2BFSP57053 126 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 HERVK_113P63121 156 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 SMAGPQ0VAQ4 97 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 SLAMF1Q13291 335 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 ZNHIT3Q15649 155 aaPredicted RBP0.63□□□□□ -2.31
YBX3-214ENST00000544501 DEFB113Q30KQ7 82 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 SPATA31B1PQ5VZV4 182 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 LCN8Q6JVE9 175 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 FAM45BPQ6NSW5 357 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 ATP5L2Q7Z4Y8 100 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 SLC35E3Q7Z769 313 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 SYCE1Q8N0S2 351 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 PACRGLQ8N7B6 248 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 C3orf56Q8N813 242 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 CLDND2Q8NHS1 167 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 SMCR5Q8TEV8 140 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 LRRC45Q96CN5 670 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 MS4A6EQ96DS6 147 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 RMND5BQ96G75 393 aaPredicted RBP0.63□□□□□ -2.31
YBX3-214ENST00000544501 SPZ1Q9BXG8 430 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 METTL9Q9H1A3 318 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 C1orf109Q9NX04 203 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 HHLA3Q9XRX5 114 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 KLK5Q9Y337 293 aaPredicted RBP0.63□□□□□ -2.31
YBX3-214ENST00000544501 DOCK10Q96BY6 2186 aa0.63□□□□□ -2.31
YBX3-214ENST00000544501 TNXBP22105 4242 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 CADP27708 2225 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 NUMA1Q14980 2115 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 RP1P56715 2156 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 NCOA6Q14686 2063 aaPredicted RBP0.62□□□□□ -2.31
YBX3-214ENST00000544501 MEIKINA0A087WXM9 373 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 TMSB15BA0A087X1C1 80 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 TRAV8-1A0A0A6YYK1 113 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 A0A1B0GVG6 124 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 MDFIC2A0A1B0GVS7 189 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 DAPL1A0PJW8 107 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 RFPL4AA6NLU0 287 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 ZNF705FA8MVS1 300 aaPredicted RBP0.62□□□□□ -2.31
YBX3-214ENST00000544501 RFPL4AL1F8VTS6 287 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 F8VZ95 297 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 F8W036 122 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 BHLHE40O14503 412 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 TNFSF15O95150 251 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 NPYP01303 97 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 LINC00614P0C842 121 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 ZNF705DP0CH99 300 aaPredicted RBP0.62□□□□□ -2.31
YBX3-214ENST00000544501 ZNF705BP0CI00 300 aaPredicted RBP0.62□□□□□ -2.31
YBX3-214ENST00000544501 PET100P0DJ07 73 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 MAGEA12P43365 314 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 RPL14P50914 215 aaKnown RBP0.62□□□□□ -2.31
YBX3-214ENST00000544501 CTBP2P56545 445 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 RBM11P57052 281 aaKnown RBP0.62□□□□□ -2.31
YBX3-214ENST00000544501 TAS2R30P59541 319 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 GLO1Q04760 184 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 MGAT3Q09327 533 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 TMEM267Q0VDI3 215 aaPredicted RBP0.62□□□□□ -2.31
YBX3-214ENST00000544501 PMS2P3Q13401 168 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 MESTQ5EB52 335 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 TMEM42Q69YG0 159 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms