RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 IGHV3-21A0A0B4J1V1 117 aa23.9■■□□□ 1.42
CCM2-219ENST00000544363 IGF1P05019 195 aa23.9■■□□□ 1.42
CCM2-219ENST00000544363 RND2P52198 227 aa23.9■■□□□ 1.42
CCM2-219ENST00000544363 Q6ZRG5 221 aa23.9■■□□□ 1.42
CCM2-219ENST00000544363 TRAV41A0A0B4J266 112 aa23.89■■□□□ 1.42
CCM2-219ENST00000544363 K7EIM0 57 aa23.89■■□□□ 1.42
CCM2-219ENST00000544363 SOX15O60248 233 aa23.89■■□□□ 1.42
CCM2-219ENST00000544363 ELLP55199 621 aaPredicted RBP23.89■■□□□ 1.42
CCM2-219ENST00000544363 C19orf54Q5BKX5 351 aa23.89■■□□□ 1.42
CCM2-219ENST00000544363 FFAR4Q5NUL3 377 aa23.89■■□□□ 1.42
CCM2-219ENST00000544363 ACSM6Q6P461 480 aa23.89■■□□□ 1.42
CCM2-219ENST00000544363 DPPA3Q6W0C5 159 aa23.89■■□□□ 1.42
CCM2-219ENST00000544363 TMEM116Q8NCL8 245 aa23.89■■□□□ 1.42
CCM2-219ENST00000544363 FAM213BQ8TBF2 198 aa23.89■■□□□ 1.42
CCM2-219ENST00000544363 VSIRQ9H7M9 311 aa23.89■■□□□ 1.42
CCM2-219ENST00000544363 KCNIP2Q9NS61 270 aa23.89■■□□□ 1.42
CCM2-219ENST00000544363 LY6G6DO95868 133 aa23.88■■□□□ 1.41
CCM2-219ENST00000544363 KLK9Q2XQG4 91 aa23.88■■□□□ 1.41
CCM2-219ENST00000544363 PXDC1Q5TGL8 231 aa23.88■■□□□ 1.41
CCM2-219ENST00000544363 Q6ZS46 218 aa23.88■■□□□ 1.41
CCM2-219ENST00000544363 THAP8Q8NA92 274 aa23.88■■□□□ 1.41
CCM2-219ENST00000544363 RPRMQ9NS64 109 aa23.88■■□□□ 1.41
CCM2-219ENST00000544363 THYN1Q9P016 225 aa23.88■■□□□ 1.41
CCM2-219ENST00000544363 KLK9Q9UKQ9 250 aa23.88■■□□□ 1.41
CCM2-219ENST00000544363 HIST1H1BP16401 226 aaKnown RBP23.88■■□□□ 1.41
CCM2-219ENST00000544363 TMEM41BQ5BJD5 291 aa23.88■■□□□ 1.41
CCM2-219ENST00000544363 MBP02144 154 aa23.87■■□□□ 1.41
CCM2-219ENST00000544363 OR10J1P30954 320 aa23.87■■□□□ 1.41
CCM2-219ENST00000544363 RPL29P47914 159 aaKnown RBP23.87■■□□□ 1.41
CCM2-219ENST00000544363 MIC13Q5XKP0 118 aa23.87■■□□□ 1.41
CCM2-219ENST00000544363 TMEM86BQ8N661 226 aa23.87■■□□□ 1.41
CCM2-219ENST00000544363 SLC45A2Q9UMX9 530 aa23.87■■□□□ 1.41
CCM2-219ENST00000544363 PXMP4Q9Y6I8 212 aa23.87■■□□□ 1.41
CCM2-219ENST00000544363 MED9Q9NWA0 146 aa23.86■■□□□ 1.41
CCM2-219ENST00000544363 LINC00527Q9UJ94 153 aa23.86■■□□□ 1.41
CCM2-219ENST00000544363 OTOGQ6ZRI0 2925 aa23.86■■□□□ 1.41
CCM2-219ENST00000544363 MXRA5Q9NR99 2828 aa23.85■■□□□ 1.41
CCM2-219ENST00000544363 ZNF616Q08AN1 781 aa23.85■■□□□ 1.41
CCM2-219ENST00000544363 RBMS3Q6XE24 437 aaKnown RBP23.85■■□□□ 1.41
CCM2-219ENST00000544363 OR4X1Q8NH49 305 aa23.85■■□□□ 1.41
CCM2-219ENST00000544363 IGKV1D-37A0A075B6S9 117 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 AP4M1O00189 453 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 TSPAN15O95858 294 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 RAB2AP61019 212 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 STPG3Q8N7X2 389 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 ZFP92A6NM28 416 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 OR2J3O76001 311 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 B2MP61769 119 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 PRR20EP86478 221 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 PRR20CP86479 221 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 PRR20DP86480 221 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 PRR20BP86481 221 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 PRR20AP86496 221 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 SCGB2A2Q13296 93 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 PFDN2Q9UHV9 154 aa23.84■■□□□ 1.41
CCM2-219ENST00000544363 SONP18583 2426 aaKnown RBP23.84■■□□□ 1.41
CCM2-219ENST00000544363 NDUFB8O95169 186 aa23.83■■□□□ 1.41
CCM2-219ENST00000544363 M6PRP20645 277 aa23.83■■□□□ 1.41
CCM2-219ENST00000544363 ACOT6Q3I5F7 207 aaPredicted RBP23.83■■□□□ 1.41
CCM2-219ENST00000544363 CYP2G1PQ6ZSU1 146 aa23.83■■□□□ 1.41
CCM2-219ENST00000544363 HRH4Q9H3N8 390 aa23.83■■□□□ 1.41
CCM2-219ENST00000544363 ZNF355PQ9NSJ1 428 aa23.83■■□□□ 1.41
CCM2-219ENST00000544363 ZNF580Q9UK33 172 aa23.83■■□□□ 1.41
CCM2-219ENST00000544363 ANK3Q12955 4377 aaKnown RBP23.82■■□□□ 1.4
CCM2-219ENST00000544363 YIF1AO95070 293 aa23.82■■□□□ 1.4
CCM2-219ENST00000544363 CD99P14209 185 aa23.82■■□□□ 1.4
CCM2-219ENST00000544363 FOSL1P15407 271 aa23.82■■□□□ 1.4
CCM2-219ENST00000544363 BPIFCQ8NFQ6 507 aa23.82■■□□□ 1.4
CCM2-219ENST00000544363 LYPD6BQ8NI32 183 aa23.82■■□□□ 1.4
CCM2-219ENST00000544363 NOL4LQ96MY1 436 aaPredicted RBP23.82■■□□□ 1.4
CCM2-219ENST00000544363 SLC39A9Q9NUM3 307 aa23.82■■□□□ 1.4
CCM2-219ENST00000544363 FBXL7Q9UJT9 491 aa23.82■■□□□ 1.4
CCM2-219ENST00000544363 TRBV9A0A0B4J1U6 114 aa23.81■■□□□ 1.4
CCM2-219ENST00000544363 TCRBV4S1A1TA0A5B7 111 aa23.81■■□□□ 1.4
CCM2-219ENST00000544363 LINC00869P0C866 280 aa23.81■■□□□ 1.4
CCM2-219ENST00000544363 COMMD7Q86VX2 200 aa23.81■■□□□ 1.4
CCM2-219ENST00000544363 RPP25LQ8N5L8 163 aaKnown RBP23.81■■□□□ 1.4
CCM2-219ENST00000544363 OR10G4Q8NGN3 311 aa23.81■■□□□ 1.4
CCM2-219ENST00000544363 OR10G9Q8NGN4 311 aa23.81■■□□□ 1.4
CCM2-219ENST00000544363 OR10G7Q8NGN6 311 aa23.81■■□□□ 1.4
CCM2-219ENST00000544363 TRGV9Q99603 122 aa23.81■■□□□ 1.4
CCM2-219ENST00000544363 NPFFR1Q9GZQ6 430 aa23.81■■□□□ 1.4
CCM2-219ENST00000544363 TEX46H3BTG2 121 aa23.81■■□□□ 1.4
CCM2-219ENST00000544363 DUX5Q96PT3 197 aa23.81■■□□□ 1.4
CCM2-219ENST00000544363 PRSS22Q9GZN4 317 aa23.81■■□□□ 1.4
CCM2-219ENST00000544363 H2AFB1P0C5Y9 115 aa23.8■■□□□ 1.4
CCM2-219ENST00000544363 PPIFP30405 207 aaKnown RBP23.8■■□□□ 1.4
CCM2-219ENST00000544363 CLN5O75503 358 aa23.79■■□□□ 1.4
CCM2-219ENST00000544363 GATA2P23769 480 aaPredicted RBP23.79■■□□□ 1.4
CCM2-219ENST00000544363 MFAP4P55083 255 aa23.79■■□□□ 1.4
CCM2-219ENST00000544363 RHOGP84095 191 aa23.79■■□□□ 1.4
CCM2-219ENST00000544363 ZNF90Q03938 601 aa23.79■■□□□ 1.4
CCM2-219ENST00000544363 ZNF726P1Q15940 193 aa23.79■■□□□ 1.4
CCM2-219ENST00000544363 GCSAMLQ5JQS6 135 aa23.79■■□□□ 1.4
CCM2-219ENST00000544363 RCC1LQ96I51 464 aaKnown RBP23.79■■□□□ 1.4
CCM2-219ENST00000544363 MFSD2BA6NFX1 497 aa23.78■■□□□ 1.4
CCM2-219ENST00000544363 SELENOTP62341 195 aa23.78■■□□□ 1.4
CCM2-219ENST00000544363 DEFA5Q01523 94 aa23.78■■□□□ 1.4
CCM2-219ENST00000544363 VN1R17PQ8TDU5 208 aa23.78■■□□□ 1.4
CCM2-219ENST00000544363 CDC42EP3Q9UKI2 254 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms