RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 OSTCQ9NRP0 149 aa8.71□□□□□ -1.01
PCDH9-204ENST00000544246 TEX43Q6ZNM6 134 aa8.71□□□□□ -1.02
PCDH9-204ENST00000544246 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.02
PCDH9-204ENST00000544246 RCHY1Q96PM5 261 aa8.71□□□□□ -1.02
PCDH9-204ENST00000544246 PPIFP30405 207 aaKnown RBP8.71□□□□□ -1.02
PCDH9-204ENST00000544246 LINC00312Q9Y6C7 94 aa8.71□□□□□ -1.02
PCDH9-204ENST00000544246 SIGLEC15Q6ZMC9 328 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 ZNF525Q8N782 197 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 FAM216BQ8N7L0 139 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 REPIN1Q9BWE0 567 aaKnown RBP8.7□□□□□ -1.02
PCDH9-204ENST00000544246 PIN1P1O15428 100 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 LILRA1O75019 489 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 ESDP10768 282 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 FAM90A1Q86YD7 464 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 C8orf46Q8TAG6 207 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 SHROOM3Q8TF72 1996 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 UPK2O00526 184 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 RAMP1O60894 148 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 URB1O60287 2271 aaKnown RBP8.7□□□□□ -1.02
PCDH9-204ENST00000544246 TRAV8-3A0A0A6YYJ7 113 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 CEACAM8P31997 349 aaPredicted RBP8.7□□□□□ -1.02
PCDH9-204ENST00000544246 Q5BKY6 102 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 DLX4Q92988 240 aaPredicted RBP8.7□□□□□ -1.02
PCDH9-204ENST00000544246 CITED1Q99966 193 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 CD160O95971 181 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 TM2D1Q9BX74 207 aa8.7□□□□□ -1.02
PCDH9-204ENST00000544246 CD200R1LQ6Q8B3 271 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 TMEM144Q7Z5S9 345 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 PLAC1Q9HBJ0 212 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 BSPH1Q075Z2 132 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 WFDC12Q8WWY7 111 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 PLSCR4Q9NRQ2 329 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 PILRAQ9UKJ1 303 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 C1QTNF9P0C862 333 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 ERCC8Q13216 396 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 LOC102723996A0A087X1L8 192 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 A6NNC1 897 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 H3BMM0 161 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 UCP1P25874 307 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 IFITM2Q01629 132 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 UBE2WQ96B02 151 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 C9orf153Q5TBE3 101 aa8.69□□□□□ -1.02
PCDH9-204ENST00000544246 LOC101059948A0A1B0GTJ6 334 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 NPIPB13A6NJU9 1138 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 RPL36AP83881 106 aaKnown RBP8.68□□□□□ -1.02
PCDH9-204ENST00000544246 RHOGP84095 191 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 C6orf226Q5I0X4 101 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 TSKUQ8WUA8 353 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 RPL36ALQ969Q0 106 aaKnown RBP8.68□□□□□ -1.02
PCDH9-204ENST00000544246 IGHV3-73A0A0B4J1V6 119 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 FAM201AQ5SY85 155 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 METRNQ9UJH8 293 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 ZNF646O15015 1829 aaPredicted RBP8.68□□□□□ -1.02
PCDH9-204ENST00000544246 SAA2-SAA4A0A096LPE2 208 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 SAA2P0DJI9 122 aaPredicted RBP8.68□□□□□ -1.02
PCDH9-204ENST00000544246 ATP1A1-AS1Q5TC04 95 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 FAM90A2PQ658T7 463 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 BCL6BQ8N143 479 aaPredicted RBP8.68□□□□□ -1.02
PCDH9-204ENST00000544246 SLC22A18ASQ8N1D0 253 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 SNHG12Q9BXW3 62 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 C15orf61A6NNL5 157 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 IFI6P09912 130 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 HAPLN4Q86UW8 402 aa8.68□□□□□ -1.02
PCDH9-204ENST00000544246 MYMXA0A1B0GTQ4 84 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 PAX8Q06710 450 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 GP6Q9HCN6 339 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 LAMA4Q16363 1823 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 A0A1W2PQF6 199 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 A0A1W2PRE2 83 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 SAP30O75446 220 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 ZNF876PQ49A33 203 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 RTBDNQ9BSG5 229 aaPredicted RBP8.67□□□□□ -1.02
PCDH9-204ENST00000544246 SPANXA1Q9NS26 97 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 NPIPB5A8MRT5 1133 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 CECR9P0C854 216 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 PYYP10082 97 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 CD33P20138 364 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 MESP2Q0VG99 397 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 CT83Q5H943 113 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 C18orf12Q96KH6 178 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 TMEM126AQ9H061 195 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 UMODP07911 640 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 SRD5A1P18405 259 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 FAM27E3Q08E93 113 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 SS18Q15532 418 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 C1QL4Q86Z23 238 aa8.67□□□□□ -1.02
PCDH9-204ENST00000544246 IGHV2OR16-5A0A0B4J2B6 119 aa8.66□□□□□ -1.02
PCDH9-204ENST00000544246 SPINK8P0C7L1 97 aa8.66□□□□□ -1.02
PCDH9-204ENST00000544246 ZXDCQ2QGD7 858 aaPredicted RBP8.66□□□□□ -1.02
PCDH9-204ENST00000544246 COL11A1P12107 1806 aaPredicted RBP8.66□□□□□ -1.02
PCDH9-204ENST00000544246 A8MXK9 166 aa8.66□□□□□ -1.02
PCDH9-204ENST00000544246 TMEM190Q8WZ59 177 aa8.66□□□□□ -1.02
PCDH9-204ENST00000544246 RSPO3Q9BXY4 272 aaPredicted RBP8.66□□□□□ -1.02
PCDH9-204ENST00000544246 LSM4Q9Y4Z0 139 aaKnown RBP8.66□□□□□ -1.02
PCDH9-204ENST00000544246 CD5LO43866 347 aa8.66□□□□□ -1.02
PCDH9-204ENST00000544246 TBX6O95947 436 aaPredicted RBP8.66□□□□□ -1.02
PCDH9-204ENST00000544246 ZNF114Q8NC26 417 aa8.66□□□□□ -1.02
PCDH9-204ENST00000544246 IGKV1-8A0A0C4DH67 115 aa8.66□□□□□ -1.02
PCDH9-204ENST00000544246 KLF17Q5JT82 389 aaPredicted RBP8.66□□□□□ -1.02
PCDH9-204ENST00000544246 IMMP1LQ96LU5 166 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms