RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 KCTD21Q4G0X4 260 aa12.96□□□□□ -0.33
RAP1B-229ENST00000543393 SFXN4Q6P4A7 337 aa12.96□□□□□ -0.33
RAP1B-229ENST00000543393 DHRS11Q6UWP2 260 aa12.96□□□□□ -0.33
RAP1B-229ENST00000543393 CMTM1Q8IZ96 169 aa12.96□□□□□ -0.33
RAP1B-229ENST00000543393 SLC25A38Q96DW6 304 aa12.96□□□□□ -0.33
RAP1B-229ENST00000543393 NARS2Q96I59 477 aaKnown RBP12.96□□□□□ -0.33
RAP1B-229ENST00000543393 NIPSNAP3BQ9BS92 247 aa12.96□□□□□ -0.33
RAP1B-229ENST00000543393 ZNF2Q9BSG1 426 aaPredicted RBP12.96□□□□□ -0.33
RAP1B-229ENST00000543393 RNF167Q9H6Y7 350 aa12.96□□□□□ -0.33
RAP1B-229ENST00000543393 DKK2Q9UBU2 259 aa12.96□□□□□ -0.33
RAP1B-229ENST00000543393 H3BMM0 161 aa12.95□□□□□ -0.34
RAP1B-229ENST00000543393 RFX2P48378 723 aa12.95□□□□□ -0.34
RAP1B-229ENST00000543393 SPINK9Q5DT21 86 aa12.95□□□□□ -0.34
RAP1B-229ENST00000543393 FAM222AQ5U5X8 452 aa12.95□□□□□ -0.34
RAP1B-229ENST00000543393 H2BFWTQ7Z2G1 175 aa12.95□□□□□ -0.34
RAP1B-229ENST00000543393 OR5H6Q8NGV6 325 aa12.95□□□□□ -0.34
RAP1B-229ENST00000543393 SEC22AQ96IW7 307 aa12.95□□□□□ -0.34
RAP1B-229ENST00000543393 AUNIPQ9H7T9 357 aa12.95□□□□□ -0.34
RAP1B-229ENST00000543393 TXNL4BQ9NX01 149 aaKnown RBP12.95□□□□□ -0.34
RAP1B-229ENST00000543393 IGHV3OR16-12A0A075B7B8 117 aa12.94□□□□□ -0.34
RAP1B-229ENST00000543393 SMIM9A6NGZ8 99 aa12.94□□□□□ -0.34
RAP1B-229ENST00000543393 CBX5P45973 191 aa12.94□□□□□ -0.34
RAP1B-229ENST00000543393 EIF2B2P49770 351 aaKnown RBP12.94□□□□□ -0.34
RAP1B-229ENST00000543393 TMEM88Q6PEY1 159 aa12.94□□□□□ -0.34
RAP1B-229ENST00000543393 TMEM230Q96A57 120 aa12.94□□□□□ -0.34
RAP1B-229ENST00000543393 MRPL36Q9P0J6 103 aaKnown RBP12.94□□□□□ -0.34
RAP1B-229ENST00000543393 TMED3Q9Y3Q3 217 aa12.94□□□□□ -0.34
RAP1B-229ENST00000543393 TEX48A0A1B0GUV7 120 aa12.93□□□□□ -0.34
RAP1B-229ENST00000543393 GPR31O00270 319 aa12.93□□□□□ -0.34
RAP1B-229ENST00000543393 CLN5O75503 358 aa12.93□□□□□ -0.34
RAP1B-229ENST00000543393 IGKV1-39P01597 117 aa12.93□□□□□ -0.34
RAP1B-229ENST00000543393 IGKV1D-39P04432 117 aa12.93□□□□□ -0.34
RAP1B-229ENST00000543393 SNCAP37840 140 aa12.93□□□□□ -0.34
RAP1B-229ENST00000543393 AQP4P55087 323 aa12.93□□□□□ -0.34
RAP1B-229ENST00000543393 FAM3BP58499 235 aaPredicted RBP12.93□□□□□ -0.34
RAP1B-229ENST00000543393 C6orf223Q8N319 242 aa12.93□□□□□ -0.34
RAP1B-229ENST00000543393 YTHDF1Q9BYJ9 559 aaKnown RBP12.93□□□□□ -0.34
RAP1B-229ENST00000543393 FXYD6Q9H0Q3 95 aa12.93□□□□□ -0.34
RAP1B-229ENST00000543393 RFNGQ9Y644 331 aa12.93□□□□□ -0.34
RAP1B-229ENST00000543393 U3KQE9 123 aa12.93□□□□□ -0.34
RAP1B-229ENST00000543393 A0A0A6YYH2 397 aa12.92□□□□□ -0.34
RAP1B-229ENST00000543393 A6NJ64 397 aa12.92□□□□□ -0.34
RAP1B-229ENST00000543393 AP2S1P53680 142 aaPredicted RBP12.92□□□□□ -0.34
RAP1B-229ENST00000543393 SNRPD3P62318 126 aaKnown RBP12.92□□□□□ -0.34
RAP1B-229ENST00000543393 PHLDA2Q53GA4 152 aa12.92□□□□□ -0.34
RAP1B-229ENST00000543393 GLMPQ8WWB7 406 aa12.92□□□□□ -0.34
RAP1B-229ENST00000543393 IFT46Q9NQC8 304 aa12.92□□□□□ -0.34
RAP1B-229ENST00000543393 NBDYA0A0U1RRE5 68 aa12.91□□□□□ -0.34
RAP1B-229ENST00000543393 FAM90A26D6RGX4 464 aa12.91□□□□□ -0.34
RAP1B-229ENST00000543393 PMP2P02689 132 aa12.91□□□□□ -0.34
RAP1B-229ENST00000543393 SCAND1P57086 179 aa12.91□□□□□ -0.34
RAP1B-229ENST00000543393 FXYD7P58549 80 aa12.91□□□□□ -0.34
RAP1B-229ENST00000543393 OXA1LQ15070 435 aa12.91□□□□□ -0.34
RAP1B-229ENST00000543393 MLANAQ16655 118 aa12.91□□□□□ -0.34
RAP1B-229ENST00000543393 C16orf54Q6UWD8 224 aa12.91□□□□□ -0.34
RAP1B-229ENST00000543393 MRGPRFQ96AM1 343 aa12.91□□□□□ -0.34
RAP1B-229ENST00000543393 FNDC4Q9H6D8 234 aaPredicted RBP12.91□□□□□ -0.34
RAP1B-229ENST00000543393 DIABLOQ9NR28 239 aa12.91□□□□□ -0.34
RAP1B-229ENST00000543393 FAM212BQ9NTI7 297 aaPredicted RBP12.91□□□□□ -0.34
RAP1B-229ENST00000543393 CORTO00230 105 aa12.9□□□□□ -0.34
RAP1B-229ENST00000543393 HLA-DRB4P13762 266 aa12.9□□□□□ -0.34
RAP1B-229ENST00000543393 IZUMO4Q1ZYL8 232 aa12.9□□□□□ -0.34
RAP1B-229ENST00000543393 TIGITQ495A1 244 aa12.9□□□□□ -0.34
RAP1B-229ENST00000543393 SPATA12Q7Z6I5 190 aa12.9□□□□□ -0.34
RAP1B-229ENST00000543393 OR4X1Q8NH49 305 aa12.9□□□□□ -0.34
RAP1B-229ENST00000543393 ATG101Q9BSB4 218 aa12.9□□□□□ -0.34
RAP1B-229ENST00000543393 HLA-DRB4X5D2U9 266 aa12.9□□□□□ -0.34
RAP1B-229ENST00000543393 DNAH5Q8TE73 4624 aa12.9□□□□□ -0.34
RAP1B-229ENST00000543393 EBAG9O00559 213 aa12.89□□□□□ -0.35
RAP1B-229ENST00000543393 SCGB2A1O75556 95 aa12.89□□□□□ -0.35
RAP1B-229ENST00000543393 IGKV1-17P01599 117 aa12.89□□□□□ -0.35
RAP1B-229ENST00000543393 IGKV3-20P01619 116 aa12.89□□□□□ -0.35
RAP1B-229ENST00000543393 HNRNPCP07910 306 aaKnown RBP eCLIP12.89□□□□□ -0.354e-7■■■□□ 17
RAP1B-229ENST00000543393 RNASE2P10153 161 aaKnown RBP12.89□□□□□ -0.35
RAP1B-229ENST00000543393 OPRK1P41145 380 aa12.89□□□□□ -0.35
RAP1B-229ENST00000543393 GDF5OSQ5U4N7 250 aa12.89□□□□□ -0.35
RAP1B-229ENST00000543393 TBC1D26Q86UD7 250 aa12.89□□□□□ -0.35
RAP1B-229ENST00000543393 SLC35G3Q8N808 338 aa12.89□□□□□ -0.35
RAP1B-229ENST00000543393 C15orf53Q8NAA6 179 aa12.89□□□□□ -0.35
RAP1B-229ENST00000543393 SEPSECSQ9HD40 501 aaKnown RBP12.89□□□□□ -0.35
RAP1B-229ENST00000543393 DMBT1Q9UGM3 2413 aaPredicted RBP12.88□□□□□ -0.35
RAP1B-229ENST00000543393 INS-IGF2F8WCM5 200 aa12.88□□□□□ -0.35
RAP1B-229ENST00000543393 CLEC2LP0C7M8 214 aa12.88□□□□□ -0.35
RAP1B-229ENST00000543393 SDC2P34741 201 aa12.88□□□□□ -0.35
RAP1B-229ENST00000543393 SUB1P53999 127 aaKnown RBP eCLIP12.88□□□□□ -0.35
RAP1B-229ENST00000543393 MXD1Q05195 221 aa12.88□□□□□ -0.35
RAP1B-229ENST00000543393 IDNKQ5T6J7 187 aa12.88□□□□□ -0.35
RAP1B-229ENST00000543393 OR5H2Q8NGV7 314 aa12.88□□□□□ -0.35
RAP1B-229ENST00000543393 OR6F1Q8NGZ6 308 aa12.88□□□□□ -0.35
RAP1B-229ENST00000543393 ZNRF2Q8NHG8 242 aa12.88□□□□□ -0.35
RAP1B-229ENST00000543393 NRN1Q9NPD7 142 aa12.88□□□□□ -0.35
RAP1B-229ENST00000543393 YTHDF2Q9Y5A9 579 aaKnown RBP12.88□□□□□ -0.35
RAP1B-229ENST00000543393 S100GP29377 79 aa12.87□□□□□ -0.35
RAP1B-229ENST00000543393 TAS2R46P59540 309 aa12.87□□□□□ -0.35
RAP1B-229ENST00000543393 ANAPC10Q9UM13 185 aa12.87□□□□□ -0.35
RAP1B-229ENST00000543393 TRAV30A0A087WSZ9 112 aa12.86□□□□□ -0.35
RAP1B-229ENST00000543393 LOC102723971A0A1B0GUV8 181 aa12.86□□□□□ -0.35
RAP1B-229ENST00000543393 NKX2-1P43699 371 aaPredicted RBP12.86□□□□□ -0.35
RAP1B-229ENST00000543393 DEFB1P60022 68 aa12.86□□□□□ -0.35
RAP1B-229ENST00000543393 DAD1P61803 113 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms