RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 MARC2Q969Z3 335 aa12.72□□□□□ -0.37
CD9-209ENST00000540891 WDR89Q96FK6 387 aaPredicted RBP12.72□□□□□ -0.37
CD9-209ENST00000540891 ASCL2Q99929 193 aa12.72□□□□□ -0.37
CD9-209ENST00000540891 MRPL27Q9P0M9 148 aaKnown RBP12.72□□□□□ -0.37
CD9-209ENST00000540891 PIGBOS1A0A0B4J2F0 54 aa12.71□□□□□ -0.37
CD9-209ENST00000540891 TMEM50AO95807 157 aa12.71□□□□□ -0.37
CD9-209ENST00000540891 FRMD6-AS1P0C7T7 363 aa12.71□□□□□ -0.37
CD9-209ENST00000540891 IGHV4-30-4P0DP06 118 aa12.71□□□□□ -0.37
CD9-209ENST00000540891 ANXA7P20073 488 aaKnown RBP12.71□□□□□ -0.37
CD9-209ENST00000540891 OPRK1P41145 380 aa12.71□□□□□ -0.37
CD9-209ENST00000540891 RELQ04864 619 aaPredicted RBP12.71□□□□□ -0.37
CD9-209ENST00000540891 C20orf24Q9BUV8 137 aa12.71□□□□□ -0.37
CD9-209ENST00000540891 CCDC32Q9BV29 185 aa12.71□□□□□ -0.37
CD9-209ENST00000540891 RBKSQ9H477 322 aa12.71□□□□□ -0.37
CD9-209ENST00000540891 DAZ1Q9NQZ3 744 aaKnown RBP12.71□□□□□ -0.37
CD9-209ENST00000540891 C19orf73Q9NVV2 129 aa12.71□□□□□ -0.37
CD9-209ENST00000540891 CACFD1Q9UGQ2 172 aa12.71□□□□□ -0.37
CD9-209ENST00000540891 HUWE1Q7Z6Z7 4374 aaKnown RBP12.71□□□□□ -0.38
CD9-209ENST00000540891 A8MZ25 164 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 K7EMT4 169 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 LYRM1O43325 122 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 ZNF207O43670 478 aaKnown RBP12.7□□□□□ -0.38
CD9-209ENST00000540891 OR4E1P0C645 316 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 SLC25A6P12236 298 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 NPBWR1P48145 328 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 DHRS2Q13268 280 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 SBSPONQ8IVN8 264 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 OR1S1Q8NH92 325 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 DTD1Q8TEA8 209 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 OR10C1Q96KK4 312 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 HIPK2Q9H2X6 1198 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 PTTG2Q9NZH5 202 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 TMED3Q9Y3Q3 217 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 COL7A1Q02388 2944 aa12.7□□□□□ -0.38
CD9-209ENST00000540891 C15orf62A8K5M9 175 aa12.69□□□□□ -0.38
CD9-209ENST00000540891 CLN5O75503 358 aa12.69□□□□□ -0.38
CD9-209ENST00000540891 HOXB5P09067 269 aa12.69□□□□□ -0.38
CD9-209ENST00000540891 CD7P09564 240 aa12.69□□□□□ -0.38
CD9-209ENST00000540891 NPY1RP25929 384 aa12.69□□□□□ -0.38
CD9-209ENST00000540891 GGNBP1Q5YKI7 109 aa12.69□□□□□ -0.38
CD9-209ENST00000540891 LYG2Q86SG7 212 aa12.69□□□□□ -0.38
CD9-209ENST00000540891 GTSCR1Q86UQ5 136 aa12.69□□□□□ -0.38
CD9-209ENST00000540891 OR4X1Q8NH49 305 aa12.69□□□□□ -0.38
CD9-209ENST00000540891 RNASEH2CQ8TDP1 164 aaKnown RBP12.69□□□□□ -0.38
CD9-209ENST00000540891 ADAP1O75689 374 aa12.68□□□□□ -0.38
CD9-209ENST00000540891 SCAF4O95104 1147 aaKnown RBP12.68□□□□□ -0.38
CD9-209ENST00000540891 GUCA2BQ16661 112 aa12.68□□□□□ -0.38
CD9-209ENST00000540891 PRSS54Q6PEW0 395 aa12.68□□□□□ -0.38
CD9-209ENST00000540891 TOMM20LQ6UXN7 152 aa12.68□□□□□ -0.38
CD9-209ENST00000540891 S100ZQ8WXG8 99 aa12.68□□□□□ -0.38
CD9-209ENST00000540891 NEURL2Q9BR09 285 aa12.68□□□□□ -0.38
CD9-209ENST00000540891 C20orf85Q9H1P6 137 aa12.68□□□□□ -0.38
CD9-209ENST00000540891 ZFAND3Q9H8U3 227 aa12.68□□□□□ -0.38
CD9-209ENST00000540891 TRAV25A0A0B4J276 109 aa12.67□□□□□ -0.38
CD9-209ENST00000540891 MPTX1A8MV57 137 aa12.67□□□□□ -0.38
CD9-209ENST00000540891 YIF1AO95070 293 aa12.67□□□□□ -0.38
CD9-209ENST00000540891 NHLRC4P0CG21 123 aaPredicted RBP12.67□□□□□ -0.38
CD9-209ENST00000540891 CD81P60033 236 aa12.67□□□□□ -0.38
CD9-209ENST00000540891 ZNF600Q6ZNG1 722 aa12.67□□□□□ -0.38
CD9-209ENST00000540891 SMPXQ9UHP9 88 aa12.67□□□□□ -0.38
CD9-209ENST00000540891 TBC1D24Q9ULP9 559 aa12.67□□□□□ -0.38
CD9-209ENST00000540891 U3KQ87 197 aa12.67□□□□□ -0.38
CD9-209ENST00000540891 IGHV7-4-1A0A0J9YVY3 117 aa12.66□□□□□ -0.38
CD9-209ENST00000540891 RPS10-NUDT3A0A1W2PQS6 291 aa12.66□□□□□ -0.38
CD9-209ENST00000540891 FAM90A26D6RGX4 464 aa12.66□□□□□ -0.38
CD9-209ENST00000540891 IFNA10P01566 189 aa12.66□□□□□ -0.38
CD9-209ENST00000540891 IGKV1-17P01599 117 aa12.66□□□□□ -0.38
CD9-209ENST00000540891 TCRBP04435 133 aa12.66□□□□□ -0.38
CD9-209ENST00000540891 C4orf46Q504U0 113 aa12.66□□□□□ -0.38
CD9-209ENST00000540891 OR52B4Q8NGK2 314 aa12.66□□□□□ -0.38
CD9-209ENST00000540891 WFDC10AQ9H1F0 79 aa12.66□□□□□ -0.38
CD9-209ENST00000540891 PUS1Q9Y606 427 aaKnown RBP eCLIP12.66□□□□□ -0.38
CD9-209ENST00000540891 IGHV3-49A0A0A0MS15 119 aa12.65□□□□□ -0.38
CD9-209ENST00000540891 CHEK1O14757 476 aa12.65□□□□□ -0.38
CD9-209ENST00000540891 IGLC1P0CG04 106 aa12.65□□□□□ -0.38
CD9-209ENST00000540891 IAPPP10997 89 aa12.65□□□□□ -0.38
CD9-209ENST00000540891 SLC25A4P12235 298 aa12.65□□□□□ -0.38
CD9-209ENST00000540891 RND2P52198 227 aa12.65□□□□□ -0.38
CD9-209ENST00000540891 TMEM116Q8NCL8 245 aa12.65□□□□□ -0.38
CD9-209ENST00000540891 COQ8AQ8NI60 647 aa12.65□□□□□ -0.38
CD9-209ENST00000540891 RHPN1-AS1Q9BWJ2 59 aa12.65□□□□□ -0.38
CD9-209ENST00000540891 BATF3Q9NR55 127 aa12.65□□□□□ -0.38
CD9-209ENST00000540891 TRAV6A0A075B6T7 132 aa12.64□□□□□ -0.39
CD9-209ENST00000540891 TRAV14DV4A0A0A6YYC5 116 aa12.64□□□□□ -0.39
CD9-209ENST00000540891 APOHP02749 345 aaPredicted RBP12.64□□□□□ -0.39
CD9-209ENST00000540891 IFITM3Q01628 133 aa12.64□□□□□ -0.39
CD9-209ENST00000540891 TIGITQ495A1 244 aa12.64□□□□□ -0.39
CD9-209ENST00000540891 LINC00322Q6ZN03 302 aaPredicted RBP12.64□□□□□ -0.39
CD9-209ENST00000540891 RBPMS2Q6ZRY4 209 aaKnown RBP12.64□□□□□ -0.39
CD9-209ENST00000540891 NOXA1Q86UR1 476 aa12.64□□□□□ -0.39
CD9-209ENST00000540891 DEFB125Q8N687 156 aa12.64□□□□□ -0.39
CD9-209ENST00000540891 MITD1Q8WV92 249 aa12.64□□□□□ -0.39
CD9-209ENST00000540891 RNF2Q99496 336 aa12.64□□□□□ -0.39
CD9-209ENST00000540891 WDR12Q9GZL7 423 aaKnown RBP12.64□□□□□ -0.39
CD9-209ENST00000540891 MAGT1Q9H0U3 335 aa12.64□□□□□ -0.39
CD9-209ENST00000540891 IGHV3OR16-13A0A075B7E8 117 aa12.63□□□□□ -0.39
CD9-209ENST00000540891 IGHV3-74A0A0B4J1X5 117 aa12.63□□□□□ -0.39
CD9-209ENST00000540891 TSPAN4O14817 238 aa12.63□□□□□ -0.39
CD9-209ENST00000540891 SYNGR2O43760 224 aa12.63□□□□□ -0.39
CD9-209ENST00000540891 ATP5IP56385 69 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms