RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 WNT2P09544 360 aa8.1□□□□□ -1.11
PHC1-208ENST00000540574 C8orf88P0DMB2 117 aa8.1□□□□□ -1.11
PHC1-208ENST00000540574 TPPP2P59282 170 aa8.1□□□□□ -1.11
PHC1-208ENST00000540574 ADIPOQQ15848 244 aa8.1□□□□□ -1.11
PHC1-208ENST00000540574 C17orf58Q2M2W7 97 aa8.1□□□□□ -1.11
PHC1-208ENST00000540574 TMEM200BQ69YZ2 307 aa8.1□□□□□ -1.11
PHC1-208ENST00000540574 TMEM183AQ8IXX5 376 aa8.1□□□□□ -1.11
PHC1-208ENST00000540574 FAM19A2Q8N3H0 131 aa8.1□□□□□ -1.11
PHC1-208ENST00000540574 RPUSD1Q9UJJ7 312 aaKnown RBP8.1□□□□□ -1.11
PHC1-208ENST00000540574 SONP18583 2426 aaKnown RBP8.1□□□□□ -1.11
PHC1-208ENST00000540574 RBFOX2O43251 390 aaKnown RBP eCLIP8.09□□□□□ -1.11
PHC1-208ENST00000540574 RAB4AP20338 218 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 DDTP30046 118 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 GPR6P46095 362 aaPredicted RBP8.09□□□□□ -1.11
PHC1-208ENST00000540574 FOXA3P55318 350 aaPredicted RBP8.09□□□□□ -1.11
PHC1-208ENST00000540574 HLA-DRB5Q30154 266 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 LINC00305Q7Z4B0 112 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 Q8TCH9 128 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 ATG101Q9BSB4 218 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 AMMECR1Q9Y4X0 333 aaPredicted RBP8.09□□□□□ -1.11
PHC1-208ENST00000540574 USP9XQ93008 2570 aaPredicted RBP8.09□□□□□ -1.11
PHC1-208ENST00000540574 POLQO75417 2590 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 A0A1B0GW64 132 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 UPK2O00526 184 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 AMBPP02760 352 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 HIST1H1BP16401 226 aaKnown RBP8.09□□□□□ -1.11
PHC1-208ENST00000540574 ADMP35318 185 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 Q56UQ5 140 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 Q6ZS92 163 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 ZNF586Q9NXT0 402 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 WASHC3Q9Y3C0 194 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 IGKV3-7A0A075B6H7 116 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 PPIAL4CA0A0B4J2A2 164 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 CHEK1O14757 476 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 IGHV2-5P01817 119 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 PPIAL4GP0DN37 164 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 SRIP30626 198 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 PRRX1P54821 245 aa8.09□□□□□ -1.11
PHC1-208ENST00000540574 SSBP4Q9BWG4 385 aaPredicted RBP8.09□□□□□ -1.11
PHC1-208ENST00000540574 ZZEF1O43149 2961 aa8.09□□□□□ -1.12
PHC1-208ENST00000540574 STAG3L2P0CL84 134 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 STAG3L3P0CL85 134 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 KLF17Q5JT82 389 aaPredicted RBP8.08□□□□□ -1.12
PHC1-208ENST00000540574 C1orf229Q6ZS94 237 aaPredicted RBP8.08□□□□□ -1.12
PHC1-208ENST00000540574 KDF1Q8NAX2 398 aaPredicted RBP8.08□□□□□ -1.12
PHC1-208ENST00000540574 RNASE6Q93091 150 aaKnown RBP8.08□□□□□ -1.12
PHC1-208ENST00000540574 ZNF430Q9H8G1 570 aaPredicted RBP8.08□□□□□ -1.12
PHC1-208ENST00000540574 IGHV3OR16-10A0A075B7F0 116 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 DLL1O00548 723 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 IGLV1-44P01699 117 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 RNF224P0DH78 156 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 NPPCP23582 126 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 LOXL3P58215 753 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 PRNTQ86SH4 94 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 ZCCHC14Q8WYQ9 949 aaKnown RBP8.08□□□□□ -1.12
PHC1-208ENST00000540574 SLC25A33Q9BSK2 321 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 VAMP8Q9BV40 100 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 TPSG1Q9NRR2 321 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 COL12A1Q99715 3063 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 CNTFRP26992 372 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 SPACA3Q8IXA5 215 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 WNK1Q9H4A3 2382 aa8.08□□□□□ -1.12
PHC1-208ENST00000540574 TRBV24-1A0A075B6N3 115 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 J3KRW8 73 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 SRP14P37108 136 aaKnown RBP8.07□□□□□ -1.12
PHC1-208ENST00000540574 RPL11P62913 178 aaKnown RBP8.07□□□□□ -1.12
PHC1-208ENST00000540574 TEX38Q6PEX7 206 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 ZNF788Q6ZQV5 615 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 C1orf174Q8IYL3 243 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 RASL11BQ9BPW5 248 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 DMRT1Q9Y5R6 373 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 LINC00312Q9Y6C7 94 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 TM4SF5O14894 197 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 PKIAP61925 76 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 TMUB1Q9BVT8 246 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 SEBOXQ9HB31 216 aaPredicted RBP8.07□□□□□ -1.12
PHC1-208ENST00000540574 PFN1P07737 140 aaKnown RBP8.07□□□□□ -1.12
PHC1-208ENST00000540574 COL8A1P27658 744 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 GRNP28799 593 aaKnown RBP8.07□□□□□ -1.12
PHC1-208ENST00000540574 TMEM144Q7Z5S9 345 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 WNT10AQ9GZT5 417 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 UBTD1Q9HAC8 227 aa8.07□□□□□ -1.12
PHC1-208ENST00000540574 IGHV3-49A0A0A0MS15 119 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 GNG7O60262 68 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 SERF1AO75920 110 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 PIP4P1Q86T03 277 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 SELENOKQ9Y6D0 94 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 ARL2-SNX15V9GYD0 113 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 AREGP15514 252 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 CDKN1AP38936 164 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 PRCDQ00LT1 54 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 PGLYRP4Q96LB8 373 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 RAXQ9Y2V3 346 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 HYPMO75409 117 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 VENTXO95231 258 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 VDAC2P45880 294 aaPredicted RBP8.06□□□□□ -1.12
PHC1-208ENST00000540574 SSBP2P81877 361 aaPredicted RBP8.06□□□□□ -1.12
PHC1-208ENST00000540574 ECSCRQ19T08 205 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 OR8B3Q8NGG8 313 aa8.06□□□□□ -1.12
PHC1-208ENST00000540574 OR8B2Q96RD0 313 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms