RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 OR2J3O76001 311 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 CNIH1O95406 144 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 KIR2DS4P43632 304 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 KIR2DS1Q14954 304 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 TIMM23BQ5SRD1 257 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 IL36RNQ9UBH0 155 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 WDR83OSQ9Y284 106 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 A0A1B0GW15 77 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 A0A1W2PRE2 83 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 H3BML4 177 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 M0R135 149 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 HSPB6O14558 160 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 ZG16O60844 167 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 TIGITQ495A1 244 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 FAM162BQ5T6X4 162 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 C8orf86Q6ZUL3 223 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 SH2D6Q7Z4S9 175 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 FGFRL1Q8N441 504 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 FDCSPQ8NFU4 85 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 NANOS1Q8WY41 292 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 FAM168AQ92567 244 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 ZNF799Q96GE5 643 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 SSBP3Q9BWW4 388 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 HINT2Q9BX68 163 aa7.79□□□□□ -1.16
CTNNA1-243ENST00000540387 CCL2P13500 99 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 COL8A2P25067 703 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 SSBP2P81877 361 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 GAGE5Q13069 117 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 GAGE6Q13070 117 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 PRR31Q5SQ13 230 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 FOXL2NBQ6ZUU3 175 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 ZDHHC16Q969W1 377 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 B4GALT7Q9UBV7 327 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 TNFRSF18Q9Y5U5 241 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 CHD8Q9HCK8 2581 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 IGLV2-14P01704 120 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 IGHV3-7P01780 117 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 P04436 131 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 SPINK8P0C7L1 97 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 OR9G9P0C7N8 305 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 ETDBQ3ZM63 59 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 LINC01545Q5VT33 79 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 OR4A16Q8NH70 328 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 HES7Q9BYE0 225 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 ALKBH4Q9NXW9 302 aa7.78□□□□□ -1.16
CTNNA1-243ENST00000540387 B5MCH6 92 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 F8W1H4 67 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 TNFSF11O14788 317 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 INSL3P51460 131 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 GUSBP1Q15486 140 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 WIPI1Q5MNZ9 446 aaPredicted RBP7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 ASPHD1Q5U4P2 390 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 SMIM20Q8N5G0 67 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 GCSAMQ8N6F7 178 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 TEX45Q8NA69 505 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 GJC3Q8NFK1 279 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 CHCHD1Q96BP2 118 aaKnown RBP7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 C18orf15Q96N68 181 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 OR1A1Q9P1Q5 309 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 HSPB8Q9UJY1 196 aa7.77□□□□□ -1.16
CTNNA1-243ENST00000540387 ZNF407Q9C0G0 2248 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 MED12Q93074 2177 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 ANKRD11Q6UB99 2663 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 EML6Q6ZMW3 1958 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 SHISA8B8ZZ34 492 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 SIVA1O15304 175 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 IGLV2-8P01709 118 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 FAM87AP0C7U9 286 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 CAMPP49913 170 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 OR1C1Q15619 314 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 ZNF645Q8N7E2 425 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 OR52E5Q8NH55 327 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 ARPC1AQ92747 370 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 UCN2Q96RP3 112 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 C1QTNF5Q9BXJ0 243 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 LIN7CQ9NUP9 197 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 CACNA1AO00555 2505 aa7.77□□□□□ -1.17
CTNNA1-243ENST00000540387 IGLV3-32A0A0A0MS00 114 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 A1L4Q6 167 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 FOXH1O75593 365 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 AREGP15514 252 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 OPRK1P41145 380 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 FOXA3P55318 350 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 RPL32P62910 135 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 ESPL1Q14674 2120 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 CR1LQ2VPA4 569 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 MIC13Q5XKP0 118 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 NUP35Q8NFH5 326 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 CACNA1GO43497 2377 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 EXPH5Q8NEV8 1989 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 PINLYPA6NC86 204 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 OR5AL1P0C617 328 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 SMIM13P0DJ93 91 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 SPINK9Q5DT21 86 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 TEPPQ6URK8 271 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 C20orf204Q6ZNR8 217 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 TTC9CQ8N5M4 171 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 FADS6Q8N9I5 356 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 TMEM116Q8NCL8 245 aa7.76□□□□□ -1.17
CTNNA1-243ENST00000540387 TRIB1Q96RU8 372 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms