RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 RAB11AP62491 216 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 PSG5Q15238 335 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 OR8G2PQ6IF36 304 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 THNSL2Q86YJ6 484 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 MMD2Q8IY49 270 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 C1orf159Q96HA4 380 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 ACY3Q96HD9 319 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 TMEM147Q9BVK8 224 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 CTDSP1Q9GZU7 261 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 NDUFA4L2Q9NRX3 87 aa13.56□□□□□ -0.24
COPS3-212ENST00000539941 WNK2Q9Y3S1 2297 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 A0A1W2PN81 502 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 EREGO14944 169 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 OPN1MWP04001 364 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 OPN1MW2P0DN77 364 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 OPN1MW3P0DN78 364 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 G0S2P27469 103 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 CHRNA7P36544 502 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 DEFB113Q30KQ7 82 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 SLC25A24Q6NUK1 477 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 SLC24A4Q8NFF2 622 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 SCGB1C1Q8TD33 95 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 RITA1Q96K30 269 aa13.55□□□□□ -0.24
COPS3-212ENST00000539941 ZNF430Q9H8G1 570 aaPredicted RBP13.55□□□□□ -0.24
COPS3-212ENST00000539941 TNCP24821 2201 aa13.54□□□□□ -0.24
COPS3-212ENST00000539941 HBE1P02100 147 aa13.54□□□□□ -0.24
COPS3-212ENST00000539941 MSMBP08118 114 aa13.54□□□□□ -0.24
COPS3-212ENST00000539941 VWC2Q2TAL6 325 aa13.54□□□□□ -0.24
COPS3-212ENST00000539941 LRRC75BQ2VPJ9 315 aa13.54□□□□□ -0.24
COPS3-212ENST00000539941 FRZBQ92765 325 aa13.54□□□□□ -0.24
COPS3-212ENST00000539941 HINT2Q9BX68 163 aa13.54□□□□□ -0.24
COPS3-212ENST00000539941 MED13LQ71F56 2210 aa13.54□□□□□ -0.24
COPS3-212ENST00000539941 A0A1W2PRD5 423 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 A0A1W2PRF3 423 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 A0A1W2PRM7 423 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 B4DSR2 109 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 CLDN34H7C241 214 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 MOSP00540 346 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 SRP19P09132 144 aaKnown RBP13.53□□□□□ -0.24
COPS3-212ENST00000539941 SNRPCP09234 159 aaKnown RBP13.53□□□□□ -0.24
COPS3-212ENST00000539941 MYOD1P15172 320 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 GATA3P23771 443 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 NPY1RP25929 384 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 PRSS8Q16651 343 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 C21orf62-AS1Q17RA5 79 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 GFI1BQ5VTD9 330 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 DPPA3Q6W0C5 159 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 MBD6Q96DN6 1003 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 SNHG12Q9BXW3 62 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 SIGLEC9Q9Y336 463 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 MRGPRG-AS1Q2M3A8 158 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 ZNF506Q5JVG8 444 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 MRPL41Q8IXM3 137 aaKnown RBP13.53□□□□□ -0.24
COPS3-212ENST00000539941 OR2G3Q8NGZ4 309 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 OR2T10Q8NGZ9 312 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 OR1P1Q8NH06 330 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 ABHD5Q8WTS1 349 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 PSMG3Q9BT73 122 aaPredicted RBP13.53□□□□□ -0.24
COPS3-212ENST00000539941 TMEM208Q9BTX3 173 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 WDR61Q9GZS3 305 aaKnown RBP13.53□□□□□ -0.24
COPS3-212ENST00000539941 SH3BGRL3Q9H299 93 aa13.53□□□□□ -0.24
COPS3-212ENST00000539941 CCDC168Q8NDH2 2452 aa13.52□□□□□ -0.25
COPS3-212ENST00000539941 ABCA2Q9BZC7 2435 aa13.52□□□□□ -0.25
COPS3-212ENST00000539941 A0A096LNT2 108 aa13.52□□□□□ -0.25
COPS3-212ENST00000539941 TGIF2-C20orf24A0A0A6YYL0 155 aa13.52□□□□□ -0.25
COPS3-212ENST00000539941 NPFFO15130 113 aa13.52□□□□□ -0.25
COPS3-212ENST00000539941 ERHP84090 104 aaKnown RBP13.52□□□□□ -0.25
COPS3-212ENST00000539941 EBI3Q14213 229 aa13.52□□□□□ -0.25
COPS3-212ENST00000539941 BSXQ3C1V8 233 aa13.52□□□□□ -0.25
COPS3-212ENST00000539941 PDZD11Q5EBL8 140 aa13.52□□□□□ -0.25
COPS3-212ENST00000539941 PPP1R27Q86WC6 154 aa13.52□□□□□ -0.25
COPS3-212ENST00000539941 NPBQ8NG41 125 aa13.52□□□□□ -0.25
COPS3-212ENST00000539941 TMEM18Q96B42 140 aa13.52□□□□□ -0.25
COPS3-212ENST00000539941 TIMM9Q9Y5J7 89 aa13.52□□□□□ -0.25
COPS3-212ENST00000539941 CENPVL3A0A0U1RRI6 287 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 UBE2L5PA0A1B0GUS4 154 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 PRSS46E5RG02 174 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 RRHO14718 337 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 ACTL6BO94805 426 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 IGKV1D-33P01593 117 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 IGKV1-33P01594 117 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 AMBPP02760 352 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 CNTFRP26992 372 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 C2orf83Q53S99 150 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 TMEM170AQ8WVE7 144 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 SRD5A3Q9H8P0 318 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 TPSG1Q9NRR2 321 aa13.51□□□□□ -0.25
COPS3-212ENST00000539941 CELSR1Q9NYQ6 3014 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 NBR2O15453 112 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 NDUFA3O95167 84 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 CA2P00918 260 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 SAA4P35542 130 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 LOXL1Q08397 574 aaPredicted RBP13.5□□□□□ -0.25
COPS3-212ENST00000539941 MMDQ15546 238 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 C1orf194Q5T5A4 169 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 DYNAPQ8N1N2 210 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 FAM213BQ8TBF2 198 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 TAF15Q92804 592 aaKnown RBP eCLIP13.5□□□□□ -0.25
COPS3-212ENST00000539941 AJUBAQ96IF1 538 aa13.5□□□□□ -0.25
COPS3-212ENST00000539941 EAF1Q96JC9 268 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms