RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 DUSP13Q9UII6 198 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 KCNS2Q9ULS6 477 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 TP53TG3Q9ULZ0 132 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 SAA2-SAA4A0A096LPE2 208 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 TRGV10A0A0A0MS01 117 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 TINCRA0A1B0GVN0 87 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 TMEM250H0YL14 139 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 CA1P00915 261 aaPredicted RBP10.42□□□□□ -0.74
DDX55-206ENST00000539934 PRH1P02810 166 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 GPX1P07203 203 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 HIST1H1DP16402 221 aaKnown RBP10.42□□□□□ -0.74
DDX55-206ENST00000539934 TAS2R46P59540 309 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 SLC35B1P78383 322 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 ATP5G2Q06055 141 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 Q0VG73 95 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 ZNF146Q15072 292 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 ACSF3Q4G176 576 aaPredicted RBP10.42□□□□□ -0.74
DDX55-206ENST00000539934 VAX1Q5SQQ9 334 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 FAM27BQ5VT28 67 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 OR13A1Q8NGR1 328 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 CST11Q9H112 138 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 TAAR3PQ9P1P4 343 aa10.42□□□□□ -0.74
DDX55-206ENST00000539934 SOX21Q9Y651 276 aaPredicted RBP10.42□□□□□ -0.74
DDX55-206ENST00000539934 MRPL33O75394 65 aaKnown RBP10.41□□□□□ -0.74
DDX55-206ENST00000539934 FAM106CPP0CH98 169 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 ZNF20P17024 532 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 CFPP27918 469 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 C3AR1Q16581 482 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 CEACAM16Q2WEN9 425 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 FAM106AQ4KMX7 169 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 C16orf82Q7Z2V1 217 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 OR10G7Q8NGN6 311 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 FAM3DQ96BQ1 224 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 TMEM101Q96IK0 257 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 OR4C12Q96R67 309 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 DEFB127Q9H1M4 99 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 TRAPPC1Q9Y5R8 145 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 AKAP6Q13023 2319 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 A0A1W2PPI3 338 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 A0A1W2PPM0 123 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 PHF1O43189 567 aaPredicted RBP10.41□□□□□ -0.74
DDX55-206ENST00000539934 CELA3BP08861 270 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 CDK2P24941 298 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 NDUFV3P56181 108 aaKnown RBP10.41□□□□□ -0.74
DDX55-206ENST00000539934 KRTAP10-9P60411 292 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 C8orf46Q8TAG6 207 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 NEUROG1Q92886 237 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 ADAT3Q96EY9 351 aaPredicted RBP10.41□□□□□ -0.74
DDX55-206ENST00000539934 FOXB1Q99853 325 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 PLEKHF2Q9H8W4 249 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 PRO0628Q9UI54 55 aa10.41□□□□□ -0.74
DDX55-206ENST00000539934 SH2D1BO14796 132 aa10.4□□□□□ -0.74
DDX55-206ENST00000539934 SERF1AO75920 110 aa10.4□□□□□ -0.74
DDX55-206ENST00000539934 ZNF93P35789 620 aaPredicted RBP10.4□□□□□ -0.74
DDX55-206ENST00000539934 OR5D14Q8NGL3 314 aa10.4□□□□□ -0.74
DDX55-206ENST00000539934 GNPNAT1Q96EK6 184 aaPredicted RBP10.4□□□□□ -0.74
DDX55-206ENST00000539934 PARP12Q9H0J9 701 aaKnown RBP10.4□□□□□ -0.74
DDX55-206ENST00000539934 KCNK15Q9H427 330 aa10.4□□□□□ -0.74
DDX55-206ENST00000539934 LSM5Q9Y4Y9 91 aaKnown RBP10.4□□□□□ -0.74
DDX55-206ENST00000539934 IGKV3D-15A0A087WSY6 115 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 M0R135 149 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 RHODO00212 210 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 IGHV3-9P01782 118 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 CD55P08174 381 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 FAM166AQ6J272 317 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 GCSAMQ8N6F7 178 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 SPTSSAQ969W0 71 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 ZNF799Q96GE5 643 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 COMMD5Q9GZQ3 224 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 RNF114Q9Y508 228 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 TRGV5A0A0B4J1U4 118 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 ZNF736B4DX44 427 aaPredicted RBP10.39□□□□□ -0.75
DDX55-206ENST00000539934 C9JAW5 83 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 ORM2P19652 201 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 EFNB2P52799 333 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 TBC1D28Q2M2D7 210 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 TSPO2Q5TGU0 170 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 SLC22A24Q8N4F4 322 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 TMEM229BQ8NBD8 167 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 SCCPDHQ8NBX0 429 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 OR5H2Q8NGV7 314 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 AGMATQ9BSE5 352 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 NRN1Q9NPD7 142 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 HIGD1AQ9Y241 93 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 FREM1Q5H8C1 2179 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 RTTNQ86VV8 2226 aa10.39□□□□□ -0.75
DDX55-206ENST00000539934 FAM90A27PA6NNH2 459 aa10.38□□□□□ -0.75
DDX55-206ENST00000539934 A8MZ25 164 aa10.38□□□□□ -0.75
DDX55-206ENST00000539934 KBTBD11O94819 623 aa10.38□□□□□ -0.75
DDX55-206ENST00000539934 CSN3P07498 182 aa10.38□□□□□ -0.75
DDX55-206ENST00000539934 IGLL1P15814 213 aa10.38□□□□□ -0.75
DDX55-206ENST00000539934 ZNF32P17041 273 aa10.38□□□□□ -0.75
DDX55-206ENST00000539934 VDAC2P45880 294 aaPredicted RBP10.38□□□□□ -0.75
DDX55-206ENST00000539934 DUX4L9Q6RFH8 374 aaPredicted RBP10.38□□□□□ -0.75
DDX55-206ENST00000539934 Q6ZS92 163 aa10.38□□□□□ -0.75
DDX55-206ENST00000539934 C18orf32Q8TCD1 76 aa10.38□□□□□ -0.75
DDX55-206ENST00000539934 OR4C46A6NHA9 309 aa10.38□□□□□ -0.75
DDX55-206ENST00000539934 ISLRO14498 428 aa10.38□□□□□ -0.75
DDX55-206ENST00000539934 FABP2P12104 132 aa10.38□□□□□ -0.75
DDX55-206ENST00000539934 MALP21145 153 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms