RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ELOA3CA0A087WX78 387 aaPredicted RBP13.64□□□□□ -0.23
LTBR-207ENST00000539925 F6UZH7 168 aa13.64□□□□□ -0.23
LTBR-207ENST00000539925 H3BQ15 152 aa13.64□□□□□ -0.23
LTBR-207ENST00000539925 HLA-DRB1P01911 266 aa13.64□□□□□ -0.23
LTBR-207ENST00000539925 ARL14EPLP0DKL9 152 aa13.64□□□□□ -0.23
LTBR-207ENST00000539925 CX3CL1P78423 397 aa13.64□□□□□ -0.23
LTBR-207ENST00000539925 MLANAQ16655 118 aa13.64□□□□□ -0.23
LTBR-207ENST00000539925 FAM78BQ5VT40 261 aa13.64□□□□□ -0.23
LTBR-207ENST00000539925 AJUBAQ96IF1 538 aa13.64□□□□□ -0.23
LTBR-207ENST00000539925 WNT10AQ9GZT5 417 aa13.64□□□□□ -0.23
LTBR-207ENST00000539925 TUBA4BQ9H853 241 aa13.64□□□□□ -0.23
LTBR-207ENST00000539925 DNAJC4Q9NNZ3 241 aa13.64□□□□□ -0.23
LTBR-207ENST00000539925 A1L4Q6 167 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 HMGB3O15347 200 aaKnown RBP13.63□□□□□ -0.23
LTBR-207ENST00000539925 PAX6P26367 422 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 AWAT1Q58HT5 328 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.63□□□□□ -0.23
LTBR-207ENST00000539925 OR4X1Q8NH49 305 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 TMEM68Q96MH6 324 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 RASL11BQ9BPW5 248 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 SLC25A33Q9BSK2 321 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 TNFRSF19Q9NS68 423 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 THYN1Q9P016 225 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 PUS1Q9Y606 427 aaKnown RBP eCLIP13.63□□□□□ -0.23
LTBR-207ENST00000539925 LRBAP50851 2863 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 C7orf77A4D0Y5 90 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 PAGE4O60829 102 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 GCHFRP30047 84 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 MFAP2P55001 183 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 CD81P60033 236 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 FAM90A2PQ658T7 463 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 TTC9CQ8N5M4 171 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 MEGF9Q9H1U4 602 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 TMPRSS5Q9H3S3 457 aa13.63□□□□□ -0.23
LTBR-207ENST00000539925 SEPSECSQ9HD40 501 aaKnown RBP13.63□□□□□ -0.23
LTBR-207ENST00000539925 A0A087WWC5 75 aa13.62□□□□□ -0.23
LTBR-207ENST00000539925 C11orf94C9JXX5 98 aa13.62□□□□□ -0.23
LTBR-207ENST00000539925 J3QLI3 93 aa13.62□□□□□ -0.23
LTBR-207ENST00000539925 COX7A2P2O60397 106 aa13.62□□□□□ -0.23
LTBR-207ENST00000539925 SCGB2A1O75556 95 aa13.62□□□□□ -0.23
LTBR-207ENST00000539925 C8orf88P0DMB2 117 aa13.62□□□□□ -0.23
LTBR-207ENST00000539925 CEBPGP53567 150 aa13.62□□□□□ -0.23
LTBR-207ENST00000539925 Q8N9W7 124 aa13.62□□□□□ -0.23
LTBR-207ENST00000539925 C17orf50Q8WW18 174 aa13.62□□□□□ -0.23
LTBR-207ENST00000539925 RPS10P5Q9NQ39 176 aa13.62□□□□□ -0.23
LTBR-207ENST00000539925 IGKV1D-37A0A075B6S9 117 aa13.61□□□□□ -0.23
LTBR-207ENST00000539925 FAM74A7A6NL05 159 aa13.61□□□□□ -0.23
LTBR-207ENST00000539925 I3L2K1 104 aa13.61□□□□□ -0.23
LTBR-207ENST00000539925 CD24P25063 80 aa13.61□□□□□ -0.23
LTBR-207ENST00000539925 PIP4P2Q8N4L2 257 aa13.61□□□□□ -0.23
LTBR-207ENST00000539925 LINC01356Q8N9X3 169 aa13.61□□□□□ -0.23
LTBR-207ENST00000539925 STXBP6Q8NFX7 210 aa13.61□□□□□ -0.23
LTBR-207ENST00000539925 OR4F5Q8NH21 305 aa13.61□□□□□ -0.23
LTBR-207ENST00000539925 OR4F4Q96R69 305 aa13.61□□□□□ -0.23
LTBR-207ENST00000539925 TRAV30A0A087WSZ9 112 aa13.6□□□□□ -0.23
LTBR-207ENST00000539925 ZNF727A8MUV8 499 aa13.6□□□□□ -0.23
LTBR-207ENST00000539925 HIST1H1BP16401 226 aaKnown RBP13.6□□□□□ -0.23
LTBR-207ENST00000539925 PLP1P60201 277 aa13.6□□□□□ -0.23
LTBR-207ENST00000539925 C10orf113Q5VZT2 155 aa13.6□□□□□ -0.23
LTBR-207ENST00000539925 S100A7AQ86SG5 101 aa13.6□□□□□ -0.23
LTBR-207ENST00000539925 ZNF48Q96MX3 618 aaPredicted RBP13.6□□□□□ -0.23
LTBR-207ENST00000539925 C7orf69Q9H7B7 122 aa13.6□□□□□ -0.23
LTBR-207ENST00000539925 NAT8Q9UHE5 227 aa13.6□□□□□ -0.23
LTBR-207ENST00000539925 FAM208BQ5VWN6 2430 aa13.6□□□□□ -0.23
LTBR-207ENST00000539925 PSMB11A5LHX3 300 aa13.59□□□□□ -0.23
LTBR-207ENST00000539925 C15orf54Q8N8G6 183 aa13.59□□□□□ -0.23
LTBR-207ENST00000539925 UHRF2Q96PU4 802 aa13.59□□□□□ -0.23
LTBR-207ENST00000539925 MED13LQ71F56 2210 aa13.59□□□□□ -0.23
LTBR-207ENST00000539925 TRAV40A0A0B4J280 105 aa13.59□□□□□ -0.23
LTBR-207ENST00000539925 TSPAN4O14817 238 aa13.59□□□□□ -0.23
LTBR-207ENST00000539925 LOXL1Q08397 574 aaPredicted RBP13.59□□□□□ -0.23
LTBR-207ENST00000539925 CST9LP1Q5W188 147 aa13.59□□□□□ -0.23
LTBR-207ENST00000539925 NAV3Q8IVL0 2385 aa13.59□□□□□ -0.23
LTBR-207ENST00000539925 SMIM7Q9BQ49 75 aa13.59□□□□□ -0.23
LTBR-207ENST00000539925 TMA7Q9Y2S6 64 aaKnown RBP13.59□□□□□ -0.23
LTBR-207ENST00000539925 FLNCQ14315 2725 aa13.58□□□□□ -0.23
LTBR-207ENST00000539925 IGHV7-81A0A0B4J1V7 117 aa13.58□□□□□ -0.24
LTBR-207ENST00000539925 TMEM241Q24JQ0 296 aa13.58□□□□□ -0.24
LTBR-207ENST00000539925 KLK9Q2XQG4 91 aa13.58□□□□□ -0.24
LTBR-207ENST00000539925 DEFB113Q30KQ7 82 aa13.58□□□□□ -0.24
LTBR-207ENST00000539925 TMEM88Q6PEY1 159 aa13.58□□□□□ -0.24
LTBR-207ENST00000539925 MIR17HGQ75NE6 70 aa13.58□□□□□ -0.24
LTBR-207ENST00000539925 TMEM190Q8WZ59 177 aa13.58□□□□□ -0.24
LTBR-207ENST00000539925 SDF2L1Q9HCN8 221 aa13.58□□□□□ -0.24
LTBR-207ENST00000539925 HIF1ANQ9NWT6 349 aa13.58□□□□□ -0.24
LTBR-207ENST00000539925 KLK9Q9UKQ9 250 aa13.58□□□□□ -0.24
LTBR-207ENST00000539925 MOB4Q9Y3A3 225 aa13.58□□□□□ -0.24
LTBR-207ENST00000539925 PLXNB1O43157 2135 aa13.58□□□□□ -0.24
LTBR-207ENST00000539925 IGLV11-55A0A075B6I3 123 aa13.57□□□□□ -0.24
LTBR-207ENST00000539925 CXorf65A6NEN9 183 aa13.57□□□□□ -0.24
LTBR-207ENST00000539925 J3QKU1 62 aa13.57□□□□□ -0.24
LTBR-207ENST00000539925 APELAP0DMC3 54 aa13.57□□□□□ -0.24
LTBR-207ENST00000539925 CBLN2Q8IUK8 224 aa13.57□□□□□ -0.24
LTBR-207ENST00000539925 SGMS2Q8NHU3 365 aa13.57□□□□□ -0.24
LTBR-207ENST00000539925 TMEM37Q8WXS4 190 aa13.57□□□□□ -0.24
LTBR-207ENST00000539925 MBD6Q96DN6 1003 aa13.57□□□□□ -0.24
LTBR-207ENST00000539925 RBM14Q96PK6 669 aaKnown RBP13.57□□□□□ -0.24
LTBR-207ENST00000539925 TMEM242Q9NWH2 141 aa13.57□□□□□ -0.24
LTBR-207ENST00000539925 DMRT1Q9Y5R6 373 aa13.57□□□□□ -0.24
LTBR-207ENST00000539925 UBR5O95071 2799 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms