RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 YLPM1P49750 1951 aaKnown RBP7.85□□□□□ -1.15
CDH13-204ENST00000539548 TNFAIP6P98066 277 aaPredicted RBP7.84□□□□□ -1.15
CDH13-204ENST00000539548 SLAQ13239 276 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 BATFQ16520 125 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 MORN5Q5VZ52 161 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 DEFB108BQ8NET1 73 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 OR2T6Q8NHC8 308 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 BORCS7Q96B45 105 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 GRAMD2BQ96HH9 432 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 CHRDL1Q9BU40 450 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 CACNA1AO00555 2505 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 KLF5Q13887 457 aaPredicted RBP7.84□□□□□ -1.15
CDH13-204ENST00000539548 MMDQ15546 238 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 TBR1Q16650 682 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 TMEM177Q53S58 311 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 CYB5R2Q6BCY4 276 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 ALKBH2Q6NS38 261 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 VHLLQ6RSH7 139 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 ZNF329Q86UD4 541 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 FAM19A2Q8N3H0 131 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 KLHDC1Q8N7A1 406 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 OR1L4Q8NGR5 311 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 LINC00479Q96M42 142 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 ZFP30Q9Y2G7 519 aa7.84□□□□□ -1.15
CDH13-204ENST00000539548 hADV38S2A0JD32 116 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 HYPMO75409 117 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 CA1P00915 261 aaPredicted RBP7.83□□□□□ -1.16
CDH13-204ENST00000539548 IGHV1-46P01743 117 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 APOA2P02652 100 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 RPL8P62917 257 aaKnown RBP7.83□□□□□ -1.16
CDH13-204ENST00000539548 TEX36Q5VZQ5 186 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 C10orf113Q5VZT2 155 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 ZNF474Q6S9Z5 364 aaPredicted RBP7.83□□□□□ -1.16
CDH13-204ENST00000539548 SPACA3Q8IXA5 215 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 FAM216BQ8N7L0 139 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 NHLRC2Q8NBF2 726 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 NUDT10Q8NFP7 164 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 NUDT11Q96G61 164 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 PAXXQ9BUH6 204 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 SSBP3Q9BWW4 388 aaPredicted RBP7.83□□□□□ -1.16
CDH13-204ENST00000539548 LINC00312Q9Y6C7 94 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 DYSFO75923 2080 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 A0A1W2PN81 502 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 PEX7O00628 323 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 COX7A2P2O60397 106 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 OR2J3O76001 311 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 MFAP2P55001 183 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 SRSF6Q13247 344 aaKnown RBP7.83□□□□□ -1.16
CDH13-204ENST00000539548 PMCHL1Q16048 86 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 GDF5OSQ5U4N7 250 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 PATE2Q6UY27 113 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 NUP35Q8NFH5 326 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 OR5AN1Q8NGI8 311 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 OR4A5Q8NH83 315 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 TMEM167AQ8TBQ9 72 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 RND1Q92730 232 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 MRPL20Q9BYC9 149 aaKnown RBP7.83□□□□□ -1.16
CDH13-204ENST00000539548 ZNF430Q9H8G1 570 aaPredicted RBP7.83□□□□□ -1.16
CDH13-204ENST00000539548 ZNF355PQ9NSJ1 428 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 ZNRD1Q9P1U0 126 aa7.83□□□□□ -1.16
CDH13-204ENST00000539548 CELSR3Q9NYQ7 3312 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 TCRBV4S1A1TA0A5B7 111 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 H0YJW9 148 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 FSTL3O95633 263 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 PYYP10082 97 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 NTF3P20783 257 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 TNFSF4P23510 183 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 CHRNB4P30926 498 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 MYCNOSP40205 109 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 TFPI2P48307 235 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 SSBP2P81877 361 aaPredicted RBP7.82□□□□□ -1.16
CDH13-204ENST00000539548 MEF2CQ06413 473 aaPredicted RBP7.82□□□□□ -1.16
CDH13-204ENST00000539548 TNXAQ16473 311 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 Q6ZN92 141 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 THAP8Q8NA92 274 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 FXYD5Q96DB9 178 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 SNRNP40Q96DI7 357 aaKnown RBP7.82□□□□□ -1.16
CDH13-204ENST00000539548 HARBI1Q96MB7 349 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 TXN2Q99757 166 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 CLEC7AQ9BXN2 247 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 LAMTOR2Q9Y2Q5 125 aa7.82□□□□□ -1.16
CDH13-204ENST00000539548 E7EUB6 86 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 SFTPCP11686 197 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 HNRNPA3P51991 378 aaKnown RBP7.81□□□□□ -1.16
CDH13-204ENST00000539548 SUB1P53999 127 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDH13-204ENST00000539548 BPIFB3P59826 476 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 RELQ04864 619 aaPredicted RBP7.81□□□□□ -1.16
CDH13-204ENST00000539548 STPG4Q8N801 248 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 FLYWCH2Q96CP2 140 aaKnown RBP7.81□□□□□ -1.16
CDH13-204ENST00000539548 ALKBH7Q9BT30 221 aaPredicted RBP7.81□□□□□ -1.16
CDH13-204ENST00000539548 WNT10AQ9GZT5 417 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 GAL3ST2Q9H3Q3 398 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 FNDC4Q9H6D8 234 aaPredicted RBP7.81□□□□□ -1.16
CDH13-204ENST00000539548 C7orf69Q9H7B7 122 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 MRPS16Q9Y3D3 137 aaKnown RBP7.81□□□□□ -1.16
CDH13-204ENST00000539548 CADP27708 2225 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 IGKV1D-37A0A075B6S9 117 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 TRAV34A0A0B4J273 112 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 C20orf202A1L168 122 aa7.81□□□□□ -1.16
CDH13-204ENST00000539548 HSBP1O75506 76 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms