RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 DFFBO76075 338 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 NDUFB8O95169 186 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 IFNA7P01567 189 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 METTL15P1P0C7V9 234 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 OR13C7P0DN81 318 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 SNCAP37840 140 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 HTR2BP41595 481 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 CDX1P47902 265 aaPredicted RBP10.05□□□□□ -0.8
CCDC42-202ENST00000539522 SUB1P53999 127 aaKnown RBP eCLIP10.05□□□□□ -0.8
CCDC42-202ENST00000539522 DEFB136Q30KP8 78 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 NSUN5P1Q3KNT7 163 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 TEX261Q6UWH6 196 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 C8orf86Q6ZUL3 223 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 NDUFA11Q86Y39 141 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 OR10P1Q8NGE3 313 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 BSCL2Q96G97 398 aaPredicted RBP10.05□□□□□ -0.8
CCDC42-202ENST00000539522 ZNF414Q96IQ9 312 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 OR4C12Q96R67 309 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 P2RX4Q99571 388 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 FBXL17Q9UF56 701 aa10.05□□□□□ -0.8
CCDC42-202ENST00000539522 TSSC4Q9Y5U2 329 aaPredicted RBP10.05□□□□□ -0.8
CCDC42-202ENST00000539522 H3BUA1 57 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 TRBV12-3P01733 135 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 TRGV3P03979 118 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 TPT1P13693 172 aaKnown RBP10.04□□□□□ -0.8
CCDC42-202ENST00000539522 TPPP2P59282 170 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 ZNF767PQ75MW2 155 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 TMEM217Q8N7C4 229 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 UBAC2Q8NBM4 344 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 ZNF680Q8NEM1 530 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 OR5C1Q8NGR4 320 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 STOML3Q8TAV4 291 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 PINX1Q96BK5 328 aaKnown RBP10.04□□□□□ -0.8
CCDC42-202ENST00000539522 RAX2Q96IS3 184 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 UBE2E2Q96LR5 201 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 DUX3Q96PT4 197 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 SMIM3Q9BZL3 60 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 WFDC1Q9HC57 220 aa10.04□□□□□ -0.8
CCDC42-202ENST00000539522 PAIP2BQ9ULR5 123 aaKnown RBP10.04□□□□□ -0.8
CCDC42-202ENST00000539522 F11RQ9Y624 299 aaKnown RBP10.04□□□□□ -0.8
CCDC42-202ENST00000539522 C15orf62A8K5M9 175 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 PMS2P5A8MQ11 134 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 F8W735 103 aaPredicted RBP10.03□□□□□ -0.8
CCDC42-202ENST00000539522 RGS13O14921 159 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 OR2J3O76001 311 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 IGHV3-11P01762 117 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 OR8U8P0C7N1 319 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 RNASE2P10153 161 aaKnown RBP10.03□□□□□ -0.8
CCDC42-202ENST00000539522 RHOGP84095 191 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 ZNF266Q14584 549 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 C2orf83Q53S99 150 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 RPL7L1Q6DKI1 246 aaKnown RBP10.03□□□□□ -0.8
CCDC42-202ENST00000539522 BAP18Q8IXM2 172 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 ZNF114Q8NC26 417 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 SLC24A4Q8NFF2 622 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 ST8SIA2Q92186 375 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 PHYHIPLQ96FC7 376 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 OR5B12Q96R08 314 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 GGACTQ9BVM4 153 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 S4R3C0 116 aa10.03□□□□□ -0.8
CCDC42-202ENST00000539522 MFSD2BA6NFX1 497 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 K7EIM0 57 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 IFNA5P01569 189 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 IFNA4P05014 189 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 NPY1RP25929 384 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 RUNX1Q01196 453 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 SLC38A11Q08AI6 406 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 ARL16Q0P5N6 197 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 FHL3Q13643 280 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 OR8G2PQ6IF36 304 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 EIF5AL1Q6IS14 154 aaKnown RBP10.02□□□□□ -0.81
CCDC42-202ENST00000539522 HAPLN4Q86UW8 402 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 KLHL30-AS1Q8NEE0 82 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 C4orf3Q8WVX3 66 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 CCDC140Q96MF4 163 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 ATP5SQ99766 215 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 ARV1Q9H2C2 271 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 ZNF355PQ9NSJ1 428 aa10.02□□□□□ -0.81
CCDC42-202ENST00000539522 I3L2K1 104 aa10.01□□□□□ -0.81
CCDC42-202ENST00000539522 CFDP00746 253 aaPredicted RBP10.01□□□□□ -0.81
CCDC42-202ENST00000539522 CLINT1Q14677 625 aa10.01□□□□□ -0.81
CCDC42-202ENST00000539522 KHDC1LQ5JSQ8 128 aa10.01□□□□□ -0.81
CCDC42-202ENST00000539522 ZNF343Q6P1L6 599 aa10.01□□□□□ -0.81
CCDC42-202ENST00000539522 LILRB2Q8N423 598 aa10.01□□□□□ -0.81
CCDC42-202ENST00000539522 SCGB1C1Q8TD33 95 aa10.01□□□□□ -0.81
CCDC42-202ENST00000539522 MRPL36Q9P0J6 103 aaKnown RBP10.01□□□□□ -0.81
CCDC42-202ENST00000539522 FBXL7Q9UJT9 491 aa10.01□□□□□ -0.81
CCDC42-202ENST00000539522 WNK1Q9H4A3 2382 aa10.01□□□□□ -0.81
CCDC42-202ENST00000539522 IGHV4OR15-8A0A075B7B6 117 aa10□□□□□ -0.81
CCDC42-202ENST00000539522 A0A087WW49 117 aa10□□□□□ -0.81
CCDC42-202ENST00000539522 IGHV3-23P01764 117 aa10□□□□□ -0.81
CCDC42-202ENST00000539522 LGALS1P09382 135 aaKnown RBP10□□□□□ -0.81
CCDC42-202ENST00000539522 DEFA4P12838 97 aa10□□□□□ -0.81
CCDC42-202ENST00000539522 GPX4P36969 197 aaPredicted RBP10□□□□□ -0.81
CCDC42-202ENST00000539522 DLK1P80370 383 aa10□□□□□ -0.81
CCDC42-202ENST00000539522 MLANAQ16655 118 aa10□□□□□ -0.81
CCDC42-202ENST00000539522 C15orf32Q32M92 178 aa10□□□□□ -0.81
CCDC42-202ENST00000539522 PRR31Q5SQ13 230 aa10□□□□□ -0.81
CCDC42-202ENST00000539522 NECAP1Q8NC96 275 aa10□□□□□ -0.81
CCDC42-202ENST00000539522 OR1L6Q8NGR2 347 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms