RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 MFAP2P55001 183 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 RAB14P61106 215 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 ALKAL2Q6UX46 152 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 C19orf35Q6ZS72 473 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 TMEM144Q7Z5S9 345 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 FAM223AQ8IWN6 122 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 SCARB1Q8WTV0 552 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 PSMG3Q9BT73 122 aaPredicted RBP12.1□□□□□ -0.47
VAMP1-207ENST00000539047 ARV1Q9H2C2 271 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 GAR1Q9NY12 217 aaKnown RBP12.1□□□□□ -0.47
VAMP1-207ENST00000539047 FBXL7Q9UJT9 491 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 TIMM9Q9Y5J7 89 aa12.1□□□□□ -0.47
VAMP1-207ENST00000539047 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 ZFP92A6NM28 416 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 OR2J3O76001 311 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 PRH1P02810 166 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 TRGV3P03979 118 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 ATP6V0CP27449 155 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 NPBWR1P48145 328 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 RND2P52198 227 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 MFAP4P55083 255 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 RHOGP84095 191 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 GAMTQ14353 236 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 C19orf54Q5BKX5 351 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 TREML4Q6UXN2 200 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 ZNF680Q8NEM1 530 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 OR2G3Q8NGZ4 309 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 VN1R17PQ8TDU5 208 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 TMED6Q8WW62 240 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 NOL4LQ96MY1 436 aaPredicted RBP12.09□□□□□ -0.47
VAMP1-207ENST00000539047 NPCDR1Q9BY65 106 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 SLC25A32Q9H2D1 315 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 LINC00527Q9UJ94 153 aa12.09□□□□□ -0.47
VAMP1-207ENST00000539047 TRAV30A0A087WSZ9 112 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 TMEM89A2RUT3 159 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 UMAD1C9J7I0 102 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 I3L2K1 104 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 SPP1P10451 314 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 PF4V1P10720 104 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 CAMLGP49069 296 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 TPPP2P59282 170 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 RUNX1Q01196 453 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 Q56UQ5 140 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 AKR1C8PQ5T2L2 129 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 Q8N2B8 174 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 LRRC20Q8TCA0 184 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 EEF1AKMT3Q96AZ1 226 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 FANCD2OSQ96PS1 177 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 FNDC4Q9H6D8 234 aaPredicted RBP12.08□□□□□ -0.48
VAMP1-207ENST00000539047 ESM1Q9NQ30 184 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 C21orf62Q9NYP8 219 aa12.08□□□□□ -0.48
VAMP1-207ENST00000539047 JMJD1CQ15652 2540 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 IGHV3-21A0A0B4J1V1 117 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 A0A0G2JLM5 398 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 PSMB11A5LHX3 300 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 RGS13O14921 159 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 GNG7O60262 68 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 BRI3O95415 125 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 MBP02144 154 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 RAB5CP51148 216 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 SERF2P84101 59 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 ATP5G2Q06055 141 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 C15orf32Q32M92 178 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 TMEM95Q3KNT9 176 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 Q6ZS46 218 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 COMMD1Q8N668 190 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 TMEM116Q8NCL8 245 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 OR4X1Q8NH49 305 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 NPIPB3Q92617 1050 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 USMG5Q96IX5 58 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 MS4A10Q96PG2 267 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 TXN2Q99757 166 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 RSG1Q9BU20 258 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 DMRT1Q9Y5R6 373 aa12.07□□□□□ -0.48
VAMP1-207ENST00000539047 TRBV7-1A0A0A6YYK4 115 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 TRBV9A0A0B4J1U6 114 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 K7EIM0 57 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 AGPAT2O15120 278 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 IGHV3-48P01763 117 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 SELENOTP62341 195 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 IFITM2Q01629 132 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 KLK9Q2XQG4 91 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 FAM209BQ5JX69 171 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 TEX38Q6PEX7 206 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 TMEM182Q6ZP80 229 aaPredicted RBP12.06□□□□□ -0.48
VAMP1-207ENST00000539047 CENPVQ7Z7K6 275 aaPredicted RBP12.06□□□□□ -0.48
VAMP1-207ENST00000539047 THAP8Q8NA92 274 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 RNF141Q8WVD5 230 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 GGTLC1Q9BX51 225 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 SH3BGRL3Q9H299 93 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 KLK9Q9UKQ9 250 aa12.06□□□□□ -0.48
VAMP1-207ENST00000539047 LSM4Q9Y4Z0 139 aaKnown RBP12.06□□□□□ -0.48
VAMP1-207ENST00000539047 TCRBV4S1A1TA0A5B7 111 aa12.05□□□□□ -0.48
VAMP1-207ENST00000539047 CLN5O75503 358 aa12.05□□□□□ -0.48
VAMP1-207ENST00000539047 NDUFB8O95169 186 aa12.05□□□□□ -0.48
VAMP1-207ENST00000539047 TSPAN15O95858 294 aa12.05□□□□□ -0.48
VAMP1-207ENST00000539047 CFDP00746 253 aaPredicted RBP12.05□□□□□ -0.48
VAMP1-207ENST00000539047 IGHG4P01861 327 aa12.05□□□□□ -0.48
VAMP1-207ENST00000539047 PPIFP30405 207 aaKnown RBP12.05□□□□□ -0.48
VAMP1-207ENST00000539047 OR10J1P30954 320 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms