RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 C16orf95Q9H693 158 aa12.19□□□□□ -0.46
SFSWAP-206ENST00000537582 RFNGQ9Y644 331 aa12.19□□□□□ -0.46
SFSWAP-206ENST00000537582 KANTRA0A1W2PQU2 76 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 SMCO3A2RU48 225 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 IGHG4P01861 327 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 TRGV3P03979 118 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 MDKP21741 143 aaPredicted RBP12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 TPPP2P59282 170 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 HBG1P69891 147 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 HBG2P69892 147 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 GAMTQ14353 236 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 ALKAL2Q6UX46 152 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 PHYHIPLQ96FC7 376 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 ACY3Q96HD9 319 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 ATP5SQ99766 215 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 ARPC5LQ9BPX5 153 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 C2CD3Q4AC94 2353 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 I3L521 148 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 NDUFA7O95182 113 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 PSMB8P28062 276 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 DLK1P80370 383 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 KLK9Q2XQG4 91 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 C15orf32Q32M92 178 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 CENPVQ7Z7K6 275 aaPredicted RBP12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 PRIMA1Q86XR5 153 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 KLHDC1Q8N7A1 406 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 OR1L6Q8NGR2 347 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 PCNPQ8WW12 178 aaKnown RBP12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 TMEM147Q9BVK8 224 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 SLC25A32Q9H2D1 315 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 UQCC1Q9NVA1 299 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 KLK9Q9UKQ9 250 aa12.18□□□□□ -0.46
SFSWAP-206ENST00000537582 F8W735 103 aaPredicted RBP12.17□□□□□ -0.46
SFSWAP-206ENST00000537582 CORTO00230 105 aa12.17□□□□□ -0.46
SFSWAP-206ENST00000537582 RPLP1P05386 114 aaKnown RBP12.17□□□□□ -0.46
SFSWAP-206ENST00000537582 RND2P52198 227 aa12.17□□□□□ -0.46
SFSWAP-206ENST00000537582 VWC2Q2TAL6 325 aa12.17□□□□□ -0.46
SFSWAP-206ENST00000537582 TCTEX1D4Q5JR98 221 aa12.17□□□□□ -0.46
SFSWAP-206ENST00000537582 NPIPB3Q92617 1050 aa12.17□□□□□ -0.46
SFSWAP-206ENST00000537582 PFDN2Q9UHV9 154 aa12.17□□□□□ -0.46
SFSWAP-206ENST00000537582 IGKV1OR2-108A0A075B7D4 117 aa12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 HAX1O00165 279 aa12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 IGHV3-11P01762 117 aa12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 HIST1H1BP16401 226 aaKnown RBP12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 GPX4P36969 197 aaPredicted RBP12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 RAB9AP51151 201 aa12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 RUNX1Q01196 453 aa12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 KIAA0141Q14154 515 aaPredicted RBP12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 ACSM6Q6P461 480 aa12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 TREML4Q6UXN2 200 aa12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 C11orf44Q8N8P7 122 aa12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 UBAC2Q8NBM4 344 aa12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 NECAP1Q8NC96 275 aa12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 WIPF2Q8TF74 440 aaPredicted RBP12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 ZNF471Q9BX82 626 aaPredicted RBP12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 SETD2Q9BYW2 2564 aaPredicted RBP12.16□□□□□ -0.46
SFSWAP-206ENST00000537582 SLC35B1P78383 322 aa12.15□□□□□ -0.46
SFSWAP-206ENST00000537582 AKR1C1Q04828 323 aa12.15□□□□□ -0.46
SFSWAP-206ENST00000537582 EIF4E3Q8N5X7 224 aaKnown RBP12.15□□□□□ -0.46
SFSWAP-206ENST00000537582 HSD17B11Q8NBQ5 300 aa12.15□□□□□ -0.46
SFSWAP-206ENST00000537582 OR5AU1Q8NGC0 362 aa12.15□□□□□ -0.46
SFSWAP-206ENST00000537582 STOML3Q8TAV4 291 aa12.15□□□□□ -0.46
SFSWAP-206ENST00000537582 LRRC20Q8TCA0 184 aa12.15□□□□□ -0.46
SFSWAP-206ENST00000537582 CACNG8Q8WXS5 425 aa12.15□□□□□ -0.46
SFSWAP-206ENST00000537582 SLC35E1Q96K37 410 aa12.15□□□□□ -0.46
SFSWAP-206ENST00000537582 CXorf58Q96LI9 332 aa12.15□□□□□ -0.46
SFSWAP-206ENST00000537582 CCDC140Q96MF4 163 aa12.15□□□□□ -0.46
SFSWAP-206ENST00000537582 H3BUA1 57 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 CYB5BO43169 146 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 ZP3P21754 424 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 FGF7P21781 194 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 FOXE3Q13461 319 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 ATP6V1FQ16864 119 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 TEX38Q6PEX7 206 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 OR4F5Q8NH21 305 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 OR5B12Q96R08 314 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 RSG1Q9BU20 258 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 GGACTQ9BVM4 153 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 SH3BGRL3Q9H299 93 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 THYN1Q9P016 225 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 WDR83OSQ9Y284 106 aa12.14□□□□□ -0.47
SFSWAP-206ENST00000537582 IGKV1D-37A0A075B6S9 117 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 FAM223BA6NKX1 122 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 TAAR5O14804 337 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 DFFBO76075 338 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 BRI3O95415 125 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 TRBV12-3P01733 135 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 PROK1P58294 105 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 ATP5G2Q06055 141 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 BTNL8Q6UX41 500 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 C18orf65Q6ZTR6 163 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 FAM223AQ8IWN6 122 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 ZNF502Q8TBZ5 544 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 MGST2Q99735 147 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 WDR61Q9GZS3 305 aaKnown RBP12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 C21orf62Q9NYP8 219 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 LSM4Q9Y4Z0 139 aaKnown RBP12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 RNF114Q9Y508 228 aa12.13□□□□□ -0.47
SFSWAP-206ENST00000537582 CLPSL1A2RUU4 121 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms