RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 NDUFB6O95139 128 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 SUB1P53999 127 aaKnown RBP eCLIP9.87□□□□□ -0.832e-6■■□□□ 12.7
PRKDC-206ENST00000536429 SRPXP78539 464 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 TNFRSF9Q07011 255 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 SMCO1Q147U7 214 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 RBMS2Q15434 407 aaKnown RBP9.87□□□□□ -0.83
PRKDC-206ENST00000536429 CENPSQ8N2Z9 138 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 DEFB125Q8N687 156 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 DUSP18Q8NEJ0 188 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 SLC24A4Q8NFF2 622 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 MARC2Q969Z3 335 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 GAR1Q9NY12 217 aaKnown RBP9.87□□□□□ -0.83
PRKDC-206ENST00000536429 HSPB7Q9UBY9 170 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 U3KQK5 164 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 STARD9Q9P2P6 4700 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 IGHV3OR16-13A0A075B7E8 117 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 IGHV3-74A0A0B4J1X5 117 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 K7EMT4 169 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 PLA2G10O15496 165 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 TMEM50AO95807 157 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 OPRK1P41145 380 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 HTR2BP41595 481 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 NPBWR1P48145 328 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 RELQ04864 619 aaPredicted RBP9.86□□□□□ -0.83
PRKDC-206ENST00000536429 C2orf83Q53S99 150 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 TOMM20LQ6UXN7 152 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 LRTM2Q8N967 370 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 OR10C1Q96KK4 312 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 RBKSQ9H477 322 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 NBEAL2Q6ZNJ1 2754 aa9.86□□□□□ -0.83
PRKDC-206ENST00000536429 A0A1B0GU03 582 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 C9orf170A2RU37 121 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 NAP1L6A6NFF2 107 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 A6NHS1 94 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 C15orf62A8K5M9 175 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 CORTO00230 105 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 PITX3O75364 302 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 APOHP02749 345 aaPredicted RBP9.85□□□□□ -0.83
PRKDC-206ENST00000536429 HOXB5P09067 269 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 ANXA7P20073 488 aaKnown RBP9.85□□□□□ -0.83
PRKDC-206ENST00000536429 HAGHQ16775 308 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 CNPY1Q3B7I2 92 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 OR4X1Q8NH49 305 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 OR1S1Q8NH92 325 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 TUBA4BQ9H853 241 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 SMPXQ9UHP9 88 aa9.85□□□□□ -0.83
PRKDC-206ENST00000536429 IGHV7-4-1A0A0J9YVY3 117 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 RBMY1BA6NDE4 496 aaKnown RBP9.84□□□□□ -0.83
PRKDC-206ENST00000536429 RBMY1EA6NEQ0 496 aaKnown RBP9.84□□□□□ -0.83
PRKDC-206ENST00000536429 OR11H12B2RN74 326 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 CHEK1O14757 476 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 CLN5O75503 358 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 IGKV1-17P01599 117 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 RBMY1DP0C7P1 496 aaKnown RBP9.84□□□□□ -0.83
PRKDC-206ENST00000536429 NPY1RP25929 384 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 TIGITQ495A1 244 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 PRSS54Q6PEW0 395 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 LINC00322Q6ZN03 302 aaPredicted RBP9.84□□□□□ -0.83
PRKDC-206ENST00000536429 RBPMS2Q6ZRY4 209 aaKnown RBP9.84□□□□□ -0.83
PRKDC-206ENST00000536429 LILRB2Q8N423 598 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 OR52B4Q8NGK2 314 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 DTD1Q8TEA8 209 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 RCHY1Q96PM5 261 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 RNF2Q99496 336 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 TM2D3Q9BRN9 247 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 RHPN1-AS1Q9BWJ2 59 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 SRD5A3Q9H8P0 318 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 ZFAND3Q9H8U3 227 aa9.84□□□□□ -0.83
PRKDC-206ENST00000536429 PUS1Q9Y606 427 aaKnown RBP eCLIP9.84□□□□□ -0.83
PRKDC-206ENST00000536429 RYR3Q15413 4870 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 TRAV25A0A0B4J276 109 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 IGHV3-66A0A0C4DH42 116 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 DUXBA0A1W2PPF3 345 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 MPTX1A8MV57 137 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 TSPAN4O14817 238 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 ADAP1O75689 374 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 IAPPP10997 89 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 RND2P52198 227 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 GGNBP1Q5YKI7 109 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 ZNF600Q6ZNG1 722 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 TMEM116Q8NCL8 245 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 RNASEH2CQ8TDP1 164 aaKnown RBP9.83□□□□□ -0.84
PRKDC-206ENST00000536429 WWC2-AS2Q96NR7 200 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 CITED4Q96RK1 184 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 C7orf50Q9BRJ6 194 aaKnown RBP9.83□□□□□ -0.84
PRKDC-206ENST00000536429 HIPK2Q9H2X6 1198 aa9.83□□□□□ -0.84
PRKDC-206ENST00000536429 TRAV14DV4A0A0A6YYC5 116 aa9.82□□□□□ -0.84
PRKDC-206ENST00000536429 IFNA10P01566 189 aa9.82□□□□□ -0.84
PRKDC-206ENST00000536429 OR4E1P0C645 316 aa9.82□□□□□ -0.84
PRKDC-206ENST00000536429 IGLC1P0CG04 106 aa9.82□□□□□ -0.84
PRKDC-206ENST00000536429 UBE2MP61081 183 aaKnown RBP9.82□□□□□ -0.84
PRKDC-206ENST00000536429 DHRS2Q13268 280 aa9.82□□□□□ -0.84
PRKDC-206ENST00000536429 SLC16A13Q7RTY0 426 aa9.82□□□□□ -0.84
PRKDC-206ENST00000536429 ST8SIA2Q92186 375 aa9.82□□□□□ -0.84
PRKDC-206ENST00000536429 MAGT1Q9H0U3 335 aa9.82□□□□□ -0.84
PRKDC-206ENST00000536429 RETNQ9HD89 108 aa9.82□□□□□ -0.84
PRKDC-206ENST00000536429 UBQLN2Q9UHD9 624 aa9.82□□□□□ -0.84
PRKDC-206ENST00000536429 TMED3Q9Y3Q3 217 aa9.82□□□□□ -0.84
PRKDC-206ENST00000536429 DYNC2H1Q8NCM8 4307 aaKnown RBP9.82□□□□□ -0.84
PRKDC-206ENST00000536429 IGKV3-7A0A075B6H7 116 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms