RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 DIAPH2-AS1Q14236 149 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 IBA57Q5T440 356 aaKnown RBP12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 RNASE6Q93091 150 aaKnown RBP12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 FNDC4Q9H6D8 234 aaPredicted RBP12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 TRAV5A0A0B4J249 113 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 TCRBV4S1A1TA0A5B7 111 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 COX7A2P2O60397 106 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 FRMD6-AS1P0C7T7 363 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 LGALS7P47929 136 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 LINC00310P59036 64 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 MORN5Q5VZ52 161 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 C10orf113Q5VZT2 155 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 BAGE3Q86Y29 109 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 BAGE2Q86Y30 109 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 TGIF2LXQ8IUE1 241 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 OR5AU1Q8NGC0 362 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 NPIPB3Q92617 1050 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 ABHD17AQ96GS6 310 aa12.95□□□□□ -0.34
CHMP1A-202ENST00000535997 ARFGEF3Q5TH69 2177 aa12.94□□□□□ -0.34
CHMP1A-202ENST00000535997 SMIM27A0A1W2PRY6 76 aa12.94□□□□□ -0.34
CHMP1A-202ENST00000535997 SERF1AO75920 110 aa12.94□□□□□ -0.34
CHMP1A-202ENST00000535997 DLX6P56179 175 aa12.94□□□□□ -0.34
CHMP1A-202ENST00000535997 VMA21Q3ZAQ7 101 aa12.94□□□□□ -0.34
CHMP1A-202ENST00000535997 THAP8Q8NA92 274 aa12.94□□□□□ -0.34
CHMP1A-202ENST00000535997 NAT8BQ9UHF3 227 aa12.94□□□□□ -0.34
CHMP1A-202ENST00000535997 AKAP13Q12802 2813 aa12.94□□□□□ -0.34
CHMP1A-202ENST00000535997 ACACAQ13085 2346 aa12.94□□□□□ -0.34
CHMP1A-202ENST00000535997 A0A1B0GV90 55 aa12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 BPIFB3P59826 476 aa12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 MISP3Q96FF7 219 aa12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 ZNF355PQ9NSJ1 428 aa12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 AMMECR1Q9Y4X0 333 aaPredicted RBP12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 ANKRD11Q6UB99 2663 aaPredicted RBP12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 MGST1P10620 155 aaKnown RBP12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 LOXP28300 417 aaPredicted RBP12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 SSTP61278 116 aa12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 TMEM155Q4W5P6 130 aa12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 PATE2Q6UY27 113 aa12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 PAXXQ9BUH6 204 aa12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 NGBQ9NPG2 151 aa12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 POLR3KQ9Y2Y1 108 aaPredicted RBP12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 BSNQ9UPA5 3926 aa12.93□□□□□ -0.34
CHMP1A-202ENST00000535997 IGKV1D-37A0A075B6S9 117 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 SSBP2P81877 361 aaPredicted RBP12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 FXYD3Q14802 87 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 C10orf55Q5SWW7 151 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 Q6ZWC4 215 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 CTSZQ9UBR2 303 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 PKDREJQ9NTG1 2253 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 SLC25A17O43808 307 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 IGHV1-8P0DP01 117 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 OR10J3Q5JRS4 329 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 ETFRF1Q6IPR1 90 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 GFRALQ6UXV0 394 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 TMEM136Q6ZRR5 245 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 TBX15Q96SF7 602 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 ZNF835Q9Y2P0 537 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 NAV3Q8IVL0 2385 aa12.92□□□□□ -0.34
CHMP1A-202ENST00000535997 KIR2DL5BA0A0G2JN68 375 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 KIR2DL5BA0A0G2JPC4 375 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 USF2Q15853 346 aaPredicted RBP12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 KIR2DL5AQ8N109 375 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 STXBP6Q8NFX7 210 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 SERTAD4Q9NUC0 356 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 ADGRG4Q8IZF6 3080 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 A0A1W2PPI3 338 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 ZNF705FA8MVS1 300 aaPredicted RBP12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 SPINK4O60575 86 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 FSTL3O95633 263 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 ZNF705DP0CH99 300 aaPredicted RBP12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 ZNF705BP0CI00 300 aaPredicted RBP12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 TCF15Q12870 199 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 PVRIGQ6DKI7 326 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 FAM231DQ6ZW35 169 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 C11orf42Q8N5U0 333 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 TEX45Q8NA69 505 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 HSPB9Q9BQS6 159 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 GNB4Q9HAV0 340 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 ATMQ13315 3056 aa12.91□□□□□ -0.34
CHMP1A-202ENST00000535997 ZFHX2Q9C0A1 2572 aaPredicted RBP12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 HLA-DQA1P01909 254 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 AMY1AP04745 511 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 SNRPCP09234 159 aaKnown RBP12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 PYYP10082 97 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 BRS3P32247 399 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 MRGPRG-AS1Q2M3A8 158 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 ZNF329Q86UD4 541 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 Q8NA96 180 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 FXYD5Q96DB9 178 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 LINC00479Q96M42 142 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 SAMD10Q9BYL1 202 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 DYNLRB1Q9NP97 96 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 SH3BGRL2Q9UJC5 107 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 GVINP1Q7Z2Y8 2422 aa12.9□□□□□ -0.34
CHMP1A-202ENST00000535997 IZUMO1RA6ND01 250 aa12.9□□□□□ -0.35
CHMP1A-202ENST00000535997 SHISA9B4DS77 424 aa12.9□□□□□ -0.35
CHMP1A-202ENST00000535997 PLXNB1O43157 2135 aa12.9□□□□□ -0.35
CHMP1A-202ENST00000535997 CRYGCP07315 174 aa12.9□□□□□ -0.35
CHMP1A-202ENST00000535997 LINC00305Q7Z4B0 112 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms