RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 NUDT3O95989 172 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 BVES-AS1Q5T3Y7 98 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 DEFB125Q8N687 156 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 CEP295Q9C0D2 2601 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 MUC21A0A0G2JKD1 596 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 MUC21A0A140T8X8 626 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 MT-ND6P03923 174 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 MUC21Q5SSG8 566 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 FAM71F2Q6NXP2 309 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 ZNF439Q8NDP4 499 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 FAM57AQ8TBR7 257 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 TCF19Q9Y242 345 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 V9GYV3 84 aa14.67□□□□□ -0.06
RAB40C-203ENST00000535977 CT45A1Q5HYN5 189 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 EBLN2Q6P2I7 272 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 WDR73Q6P4I2 378 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 NUP37Q8NFH4 326 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 CT45A3Q8NHU0 189 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 GCM1Q9NP62 436 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 FOXA2Q9Y261 457 aaPredicted RBP14.66□□□□□ -0.06
RAB40C-203ENST00000535977 C15orf61A6NNL5 157 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 POU2AF1Q16633 256 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 SPRNQ5BIV9 151 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 TREML4Q6UXN2 200 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 PLPPR2Q96GM1 343 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 ZC2HC1AQ96GY0 325 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 NPVFQ9HCQ7 196 aa14.66□□□□□ -0.06
RAB40C-203ENST00000535977 PRSS46E5RG02 174 aa14.65□□□□□ -0.06
RAB40C-203ENST00000535977 BMI1P35226 326 aa14.65□□□□□ -0.06
RAB40C-203ENST00000535977 ENY2Q9NPA8 101 aa14.65□□□□□ -0.06
RAB40C-203ENST00000535977 IDI2-AS1Q9NZ38 188 aa14.65□□□□□ -0.06
RAB40C-203ENST00000535977 FNDC10F2Z333 226 aa14.65□□□□□ -0.06
RAB40C-203ENST00000535977 IGHV1-46P01743 117 aa14.65□□□□□ -0.06
RAB40C-203ENST00000535977 ARL14EPLP0DKL9 152 aa14.65□□□□□ -0.06
RAB40C-203ENST00000535977 HSPE1P61604 102 aaKnown RBP14.65□□□□□ -0.06
RAB40C-203ENST00000535977 SSX8Q7RTT4 187 aa14.65□□□□□ -0.06
RAB40C-203ENST00000535977 RBMXL3Q8N7X1 1067 aaKnown RBP14.65□□□□□ -0.06
RAB40C-203ENST00000535977 TMEM14BQ9NUH8 114 aa14.65□□□□□ -0.06
RAB40C-203ENST00000535977 TRAV8-6A0A0B4J262 113 aa14.65□□□□□ -0.07
RAB40C-203ENST00000535977 FAM181BA6NEQ2 426 aa14.65□□□□□ -0.07
RAB40C-203ENST00000535977 RRHO14718 337 aa14.65□□□□□ -0.07
RAB40C-203ENST00000535977 CD40P25942 277 aa14.65□□□□□ -0.07
RAB40C-203ENST00000535977 CX3CL1P78423 397 aa14.65□□□□□ -0.07
RAB40C-203ENST00000535977 RAB31Q13636 194 aa14.65□□□□□ -0.07
RAB40C-203ENST00000535977 SPATA12Q7Z6I5 190 aa14.65□□□□□ -0.07
RAB40C-203ENST00000535977 NDUFS8O00217 210 aa14.64□□□□□ -0.07
RAB40C-203ENST00000535977 ATP5IP56385 69 aaPredicted RBP14.64□□□□□ -0.07
RAB40C-203ENST00000535977 ARF6P62330 175 aa14.64□□□□□ -0.07
RAB40C-203ENST00000535977 YTHDF2Q9Y5A9 579 aaKnown RBP14.64□□□□□ -0.07
RAB40C-203ENST00000535977 HCFC1P51610 2035 aa14.64□□□□□ -0.07
RAB40C-203ENST00000535977 NCOR2Q9Y618 2525 aa14.64□□□□□ -0.07
RAB40C-203ENST00000535977 AKAP13Q12802 2813 aa14.64□□□□□ -0.07
RAB40C-203ENST00000535977 SAA2P0DJI9 122 aaPredicted RBP14.64□□□□□ -0.07
RAB40C-203ENST00000535977 RPL31P62899 125 aaKnown RBP14.64□□□□□ -0.07
RAB40C-203ENST00000535977 TBR1Q16650 682 aa14.64□□□□□ -0.07
RAB40C-203ENST00000535977 TEX36Q5VZQ5 186 aa14.64□□□□□ -0.07
RAB40C-203ENST00000535977 ZNF788Q6ZQV5 615 aa14.64□□□□□ -0.07
RAB40C-203ENST00000535977 GAFA1Q96PS6 74 aa14.64□□□□□ -0.07
RAB40C-203ENST00000535977 PRNDQ9UKY0 176 aa14.64□□□□□ -0.07
RAB40C-203ENST00000535977 GOSR1O95249 250 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 CXorf1O96002 111 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 GATA2P23769 480 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-203ENST00000535977 APOBEC3AP31941 199 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-203ENST00000535977 CA7P43166 264 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 TCL1AP56279 114 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 TNXAQ16473 311 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 S100A7AQ86SG5 101 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 VKORC1L1Q8N0U8 176 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 RPRMLQ8N4K4 120 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 EAF1Q96JC9 268 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-203ENST00000535977 TMEM108Q6UXF1 575 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 OR8B3Q8NGG8 313 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 OR8B2Q96RD0 313 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 GGTLC1Q9BX51 225 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 MS4A5Q9H3V2 200 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 ZNF257Q9Y2Q1 563 aa14.63□□□□□ -0.07
RAB40C-203ENST00000535977 CFAP47Q6ZTR5 3102 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 TNFRSF1AP19438 455 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 UBE2G1P62253 170 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 MRPL54Q6P161 138 aaKnown RBP14.62□□□□□ -0.07
RAB40C-203ENST00000535977 ABHD12Q8N2K0 398 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 FER1L6-AS1Q8NA97 138 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 LSM4Q9Y4Z0 139 aaKnown RBP14.62□□□□□ -0.07
RAB40C-203ENST00000535977 TRAV3A0A0B4J244 114 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 hADV38S2A0JD32 116 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 LINC00869P0C866 280 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 IGLC1P0CG04 106 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 NPY1RP25929 384 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 PAX2Q02962 417 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 FAM27E3Q08E93 113 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 C18orf32Q8TCD1 76 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 MGST2Q99735 147 aa14.62□□□□□ -0.07
RAB40C-203ENST00000535977 IGHV3-7P01780 117 aa14.61□□□□□ -0.07
RAB40C-203ENST00000535977 STAG3L2P0CL84 134 aa14.61□□□□□ -0.07
RAB40C-203ENST00000535977 STAG3L3P0CL85 134 aa14.61□□□□□ -0.07
RAB40C-203ENST00000535977 TEPPQ6URK8 271 aa14.61□□□□□ -0.07
RAB40C-203ENST00000535977 KIR3DL3Q8N743 410 aa14.61□□□□□ -0.07
RAB40C-203ENST00000535977 RPUSD1Q9UJJ7 312 aaKnown RBP14.61□□□□□ -0.07
RAB40C-203ENST00000535977 G3V4G9 280 aa14.61□□□□□ -0.07
RAB40C-203ENST00000535977 M0R2Z0 102 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms