RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 IFITM3Q01628 133 aa13.43□□□□□ -0.26
CAPRIN1-217ENST00000534825 GUCA2BQ16661 112 aa13.43□□□□□ -0.26
CAPRIN1-217ENST00000534825 BTNL8Q6UX41 500 aa13.43□□□□□ -0.26
CAPRIN1-217ENST00000534825 GAR1Q9NY12 217 aaKnown RBP13.43□□□□□ -0.26
CAPRIN1-217ENST00000534825 PIGBOS1A0A0B4J2F0 54 aa13.42□□□□□ -0.26
CAPRIN1-217ENST00000534825 PITX3O75364 302 aa13.42□□□□□ -0.26
CAPRIN1-217ENST00000534825 SPCS3P61009 180 aa13.42□□□□□ -0.26
CAPRIN1-217ENST00000534825 DHRS2Q13268 280 aa13.42□□□□□ -0.26
CAPRIN1-217ENST00000534825 HAGHQ16775 308 aa13.42□□□□□ -0.26
CAPRIN1-217ENST00000534825 RNASE11Q8TAA1 199 aaKnown RBP13.42□□□□□ -0.26
CAPRIN1-217ENST00000534825 PINX1Q96BK5 328 aaKnown RBP13.42□□□□□ -0.26
CAPRIN1-217ENST00000534825 RCHY1Q96PM5 261 aa13.42□□□□□ -0.26
CAPRIN1-217ENST00000534825 PDCD10Q9BUL8 212 aa13.42□□□□□ -0.26
CAPRIN1-217ENST00000534825 C20orf85Q9H1P6 137 aa13.42□□□□□ -0.26
CAPRIN1-217ENST00000534825 DAZ1Q9NQZ3 744 aaKnown RBP13.42□□□□□ -0.26
CAPRIN1-217ENST00000534825 IGHV3OR16-8A0A075B7F1 116 aa13.41□□□□□ -0.26
CAPRIN1-217ENST00000534825 TRAV25A0A0B4J276 109 aa13.41□□□□□ -0.26
CAPRIN1-217ENST00000534825 C9orf170A2RU37 121 aa13.41□□□□□ -0.26
CAPRIN1-217ENST00000534825 NUPL2O15504 423 aaKnown RBP13.41□□□□□ -0.26
CAPRIN1-217ENST00000534825 SULT1A3P0DMM9 295 aa13.41□□□□□ -0.26
CAPRIN1-217ENST00000534825 SULT1A4P0DMN0 295 aa13.41□□□□□ -0.26
CAPRIN1-217ENST00000534825 SLC25A6P12236 298 aa13.41□□□□□ -0.26
CAPRIN1-217ENST00000534825 VAMP1P23763 118 aa13.41□□□□□ -0.26
CAPRIN1-217ENST00000534825 MLANAQ16655 118 aa13.41□□□□□ -0.26
CAPRIN1-217ENST00000534825 DEFB125Q8N687 156 aa13.41□□□□□ -0.26
CAPRIN1-217ENST00000534825 TUBA4BQ9H853 241 aa13.41□□□□□ -0.26
CAPRIN1-217ENST00000534825 HSPB7Q9UBY9 170 aa13.41□□□□□ -0.26
CAPRIN1-217ENST00000534825 C15orf62A8K5M9 175 aa13.4□□□□□ -0.26
CAPRIN1-217ENST00000534825 SCAF4O95104 1147 aaKnown RBP13.4□□□□□ -0.26
CAPRIN1-217ENST00000534825 OR4E1P0C645 316 aa13.4□□□□□ -0.26
CAPRIN1-217ENST00000534825 HOXA1P49639 335 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-217ENST00000534825 SUB1P53999 127 aaKnown RBP eCLIP13.4□□□□□ -0.26
CAPRIN1-217ENST00000534825 SMCO1Q147U7 214 aa13.4□□□□□ -0.26
CAPRIN1-217ENST00000534825 LYG2Q86SG7 212 aa13.4□□□□□ -0.26
CAPRIN1-217ENST00000534825 OR10C1Q96KK4 312 aa13.4□□□□□ -0.26
CAPRIN1-217ENST00000534825 C20orf24Q9BUV8 137 aa13.4□□□□□ -0.26
CAPRIN1-217ENST00000534825 WFDC10AQ9H1F0 79 aa13.4□□□□□ -0.26
CAPRIN1-217ENST00000534825 FNDC4Q9H6D8 234 aaPredicted RBP13.4□□□□□ -0.26
CAPRIN1-217ENST00000534825 ZMAT4Q9H898 229 aa13.4□□□□□ -0.26
CAPRIN1-217ENST00000534825 A0A1B0GU03 582 aa13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 RBMY1BA6NDE4 496 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 RBMY1EA6NEQ0 496 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 OR11H12B2RN74 326 aa13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 ZNF207O43670 478 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 TCRBP04435 133 aa13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 RBMY1DP0C7P1 496 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 ANXA7P20073 488 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 RELQ04864 619 aaPredicted RBP13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 TNFRSF9Q07011 255 aa13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 DUSP18Q8NEJ0 188 aa13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 ENY2Q9NPA8 101 aa13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 NUDT15Q9NV35 164 aa13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 MRPL36Q9P0J6 103 aaKnown RBP13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 CACFD1Q9UGQ2 172 aa13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 TMED3Q9Y3Q3 217 aa13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 NBEAL2Q6ZNJ1 2754 aa13.39□□□□□ -0.27
CAPRIN1-217ENST00000534825 DNAH7Q8WXX0 4024 aa13.38□□□□□ -0.27
CAPRIN1-217ENST00000534825 CORTO00230 105 aa13.38□□□□□ -0.27
CAPRIN1-217ENST00000534825 TMEM50AO95807 157 aa13.38□□□□□ -0.27
CAPRIN1-217ENST00000534825 NPBWR1P48145 328 aa13.38□□□□□ -0.27
CAPRIN1-217ENST00000534825 RBPMS2Q6ZRY4 209 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-217ENST00000534825 TMEM170AQ8WVE7 144 aa13.38□□□□□ -0.27
CAPRIN1-217ENST00000534825 SMPXQ9UHP9 88 aa13.38□□□□□ -0.27
CAPRIN1-217ENST00000534825 TSPAN4O14817 238 aa13.37□□□□□ -0.27
CAPRIN1-217ENST00000534825 GNG7O60262 68 aa13.37□□□□□ -0.27
CAPRIN1-217ENST00000534825 SLC16A13Q7RTY0 426 aa13.37□□□□□ -0.27
CAPRIN1-217ENST00000534825 OR52B4Q8NGK2 314 aa13.37□□□□□ -0.27
CAPRIN1-217ENST00000534825 MITD1Q8WV92 249 aa13.37□□□□□ -0.27
CAPRIN1-217ENST00000534825 FAM90A26D6RGX4 464 aa13.36□□□□□ -0.27
CAPRIN1-217ENST00000534825 CHEK1O14757 476 aa13.36□□□□□ -0.27
CAPRIN1-217ENST00000534825 YIF1AO95070 293 aa13.36□□□□□ -0.27
CAPRIN1-217ENST00000534825 HTR2BP41595 481 aa13.36□□□□□ -0.27
CAPRIN1-217ENST00000534825 C2orf83Q53S99 150 aa13.36□□□□□ -0.27
CAPRIN1-217ENST00000534825 TOMM20LQ6UXN7 152 aa13.36□□□□□ -0.27
CAPRIN1-217ENST00000534825 OR4X1Q8NH49 305 aa13.36□□□□□ -0.27
CAPRIN1-217ENST00000534825 HEYLQ9NQ87 328 aaPredicted RBP13.36□□□□□ -0.27
CAPRIN1-217ENST00000534825 IGHV7-4-1A0A0J9YVY3 117 aa13.35□□□□□ -0.27
CAPRIN1-217ENST00000534825 CEBPZOSA8MTT3 80 aa13.35□□□□□ -0.27
CAPRIN1-217ENST00000534825 GGNBP1Q5YKI7 109 aa13.35□□□□□ -0.27
CAPRIN1-217ENST00000534825 TMEM116Q8NCL8 245 aa13.35□□□□□ -0.27
CAPRIN1-217ENST00000534825 SPAG8Q99932 426 aaPredicted RBP13.35□□□□□ -0.27
CAPRIN1-217ENST00000534825 RHPN1-AS1Q9BWJ2 59 aa13.35□□□□□ -0.27
CAPRIN1-217ENST00000534825 SRD5A3Q9H8P0 318 aa13.35□□□□□ -0.27
CAPRIN1-217ENST00000534825 KMT2CQ8NEZ4 4911 aaKnown RBP13.35□□□□□ -0.27
CAPRIN1-217ENST00000534825 TRAV14DV4A0A0A6YYC5 116 aa13.34□□□□□ -0.27
CAPRIN1-217ENST00000534825 MPTX1A8MV57 137 aa13.34□□□□□ -0.27
CAPRIN1-217ENST00000534825 CLN5O75503 358 aa13.34□□□□□ -0.27
CAPRIN1-217ENST00000534825 ADAP1O75689 374 aa13.34□□□□□ -0.27
CAPRIN1-217ENST00000534825 NXPH3O95157 252 aa13.34□□□□□ -0.27
CAPRIN1-217ENST00000534825 OPRK1P41145 380 aa13.34□□□□□ -0.27
CAPRIN1-217ENST00000534825 LAMTOR1Q6IAA8 161 aa13.34□□□□□ -0.27
CAPRIN1-217ENST00000534825 SLC24A4Q8NFF2 622 aa13.34□□□□□ -0.27
CAPRIN1-217ENST00000534825 CITED4Q96RK1 184 aa13.34□□□□□ -0.27
CAPRIN1-217ENST00000534825 RNF2Q99496 336 aa13.34□□□□□ -0.27
CAPRIN1-217ENST00000534825 SPATA25Q9BR10 227 aa13.34□□□□□ -0.27
CAPRIN1-217ENST00000534825 TRAV6A0A075B6T7 132 aa13.33□□□□□ -0.28
CAPRIN1-217ENST00000534825 IGHV3-49A0A0A0MS15 119 aa13.33□□□□□ -0.28
CAPRIN1-217ENST00000534825 IGKV1-17P01599 117 aa13.33□□□□□ -0.28
CAPRIN1-217ENST00000534825 C4orf46Q504U0 113 aa13.33□□□□□ -0.28
CAPRIN1-217ENST00000534825 FAM90A2PQ658T7 463 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms