RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 OR2K2Q8NGT1 345 aa3.76□□□□□ -1.81
USH1C-210ENST00000534556 DYNLRB2Q8TF09 96 aa3.76□□□□□ -1.81
USH1C-210ENST00000534556 ST8SIA2Q92186 375 aa3.76□□□□□ -1.81
USH1C-210ENST00000534556 WWC2-AS2Q96NR7 200 aa3.76□□□□□ -1.81
USH1C-210ENST00000534556 RNF2Q99496 336 aa3.76□□□□□ -1.81
USH1C-210ENST00000534556 C20orf24Q9BUV8 137 aa3.76□□□□□ -1.81
USH1C-210ENST00000534556 RBKSQ9H477 322 aa3.76□□□□□ -1.81
USH1C-210ENST00000534556 SRD5A3Q9H8P0 318 aa3.76□□□□□ -1.81
USH1C-210ENST00000534556 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.76□□□□□ -1.81
USH1C-210ENST00000534556 TECRQ9NZ01 308 aaKnown RBP3.76□□□□□ -1.81
USH1C-210ENST00000534556 MRPL27Q9P0M9 148 aaKnown RBP3.76□□□□□ -1.81
USH1C-210ENST00000534556 RABL2AQ9UBK7 228 aaPredicted RBP3.76□□□□□ -1.81
USH1C-210ENST00000534556 UBQLN2Q9UHD9 624 aa3.76□□□□□ -1.81
USH1C-210ENST00000534556 SMPXQ9UHP9 88 aa3.76□□□□□ -1.81
USH1C-210ENST00000534556 RABL2BQ9UNT1 228 aa3.76□□□□□ -1.81
USH1C-210ENST00000534556 IGKV1D-37A0A075B6S9 117 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 IGKV1OR2-108A0A075B7D4 117 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 A0A0B4J2A0 478 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 IGHV3-66A0A0C4DH42 116 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 IGHV7-4-1A0A0J9YVY3 117 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 A6NHS1 94 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 C15orf62A8K5M9 175 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 PRSS46E5RG02 174 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 K7EMT4 169 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 TSPAN4O14817 238 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 ADAP1O75689 374 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 SULT1A3P0DMM9 295 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 SULT1A4P0DMN0 295 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 IL7P13232 177 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 HOXA1P49639 335 aaPredicted RBP3.75□□□□□ -1.81
USH1C-210ENST00000534556 UBE2MP61081 183 aaKnown RBP3.75□□□□□ -1.81
USH1C-210ENST00000534556 ERHP84090 104 aaKnown RBP3.75□□□□□ -1.81
USH1C-210ENST00000534556 IFITM3Q01628 133 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 TNFRSF9Q07011 255 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 RBMS2Q15434 407 aaKnown RBP3.75□□□□□ -1.81
USH1C-210ENST00000534556 C2orf83Q53S99 150 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 PRSS54Q6PEW0 395 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 SPSB3Q6PJ21 355 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 TMED4Q7Z7H5 227 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 SGPP2Q8IWX5 399 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 TOMM5Q8N4H5 51 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 LRTM2Q8N967 370 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 OR52B4Q8NGK2 314 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 OR52E5Q8NH55 327 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 IL22RA2Q969J5 263 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 RRNAD1Q96FB5 475 aaKnown RBP3.75□□□□□ -1.81
USH1C-210ENST00000534556 ATP6V0BQ99437 205 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 TXN2Q99757 166 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 RHPN1-AS1Q9BWJ2 59 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 VSIRQ9H7M9 311 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 THYN1Q9P016 225 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 HSPB7Q9UBY9 170 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 SHPKQ9UHJ6 478 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 SCP2D1Q9UJQ7 156 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 PUS1Q9Y606 427 aaKnown RBP eCLIP3.75□□□□□ -1.81
USH1C-210ENST00000534556 U3KQE9 123 aa3.75□□□□□ -1.81
USH1C-210ENST00000534556 IGKV3-7A0A075B6H7 116 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 TRAV25A0A0B4J276 109 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 C9orf170A2RU37 121 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 NUPL2O15504 423 aaKnown RBP3.74□□□□□ -1.81
USH1C-210ENST00000534556 GNG7O60262 68 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 CLN5O75503 358 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 B3GALNT1O75752 331 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 CCNKO75909 580 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 NDUFB6O95139 128 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 SFT2D2O95562 160 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 HOXB5P09067 269 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 IGLC1P0CG04 106 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 IAPPP10997 89 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 ANXA7P20073 488 aaKnown RBP3.74□□□□□ -1.81
USH1C-210ENST00000534556 S100A5P33763 92 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 SNCAP37840 140 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 RND2P52198 227 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 PAX9P55771 341 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 DCTN2Q13561 401 aaKnown RBP3.74□□□□□ -1.81
USH1C-210ENST00000534556 SMCO1Q147U7 214 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 USF2Q15853 346 aaPredicted RBP3.74□□□□□ -1.81
USH1C-210ENST00000534556 CNPY1Q3B7I2 92 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 TMEM128Q5BJH2 165 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 GGNBP1Q5YKI7 109 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 TMEM182Q6ZP80 229 aaPredicted RBP3.74□□□□□ -1.81
USH1C-210ENST00000534556 APRG1Q8IVJ8 170 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 GBGT1Q8N5D6 347 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 OR1L6Q8NGR2 347 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 OR4X1Q8NH49 305 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 RNASE11Q8TAA1 199 aaKnown RBP3.74□□□□□ -1.81
USH1C-210ENST00000534556 NPIPB3Q92617 1050 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 MARC2Q969Z3 335 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 C17orf77Q96MU5 243 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 OVOL2Q9BRP0 275 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 MAGT1Q9H0U3 335 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 PALMDQ9NP74 551 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 HEYLQ9NQ87 328 aaPredicted RBP3.74□□□□□ -1.81
USH1C-210ENST00000534556 DAZ1Q9NQZ3 744 aaKnown RBP3.74□□□□□ -1.81
USH1C-210ENST00000534556 UFC1Q9Y3C8 167 aa3.74□□□□□ -1.81
USH1C-210ENST00000534556 DNAH17Q9UFH2 4485 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 PMS2P5A8MQ11 134 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 CEBPZOSA8MTT3 80 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 DFFBO76075 338 aa3.73□□□□□ -1.81
USH1C-210ENST00000534556 YIF1AO95070 293 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms