RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 SSBP2P81877 361 aaPredicted RBP10.68□□□□□ -0.7
BEST1-208ENST00000534553 PAX8Q06710 450 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 CTRB2Q6GPI1 263 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 SDF2L1Q9HCN8 221 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 DNAJC4Q9NNZ3 241 aa10.68□□□□□ -0.7
BEST1-208ENST00000534553 FABP1P07148 127 aa10.67□□□□□ -0.7
BEST1-208ENST00000534553 C8orf88P0DMB2 117 aa10.67□□□□□ -0.7
BEST1-208ENST00000534553 TMEM11P17152 192 aa10.67□□□□□ -0.7
BEST1-208ENST00000534553 FXYD3Q14802 87 aa10.67□□□□□ -0.7
BEST1-208ENST00000534553 MLANAQ16655 118 aa10.67□□□□□ -0.7
BEST1-208ENST00000534553 TMEM241Q24JQ0 296 aa10.67□□□□□ -0.7
BEST1-208ENST00000534553 RNF212Q495C1 297 aa10.67□□□□□ -0.7
BEST1-208ENST00000534553 CTDSP1Q9GZU7 261 aa10.67□□□□□ -0.7
BEST1-208ENST00000534553 PARLQ9H300 379 aa10.67□□□□□ -0.7
BEST1-208ENST00000534553 DCHS2Q6V1P9 2916 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 A0A1W2PRD5 423 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 A0A1W2PRF3 423 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 A0A1W2PRM7 423 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 NPIPB5A8MRT5 1133 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 FCN1O00602 326 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 NPFFO15130 113 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 COX7A2P2O60397 106 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 EIF3GO75821 320 aaKnown RBP eCLIP10.66□□□□□ -0.7
BEST1-208ENST00000534553 RNF224P0DH78 156 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 FOLR2P14207 255 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 CST9LP1Q5W188 147 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 STXBP6Q8NFX7 210 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 C17orf50Q8WW18 174 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 UHRF2Q96PU4 802 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 SLC25A33Q9BSK2 321 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 TNFRSF19Q9NS68 423 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 DOK5Q9P104 306 aa10.66□□□□□ -0.7
BEST1-208ENST00000534553 IGKV1D-37A0A075B6S9 117 aa10.65□□□□□ -0.7
BEST1-208ENST00000534553 COLCA2A8K830 154 aa10.65□□□□□ -0.7
BEST1-208ENST00000534553 OR2C1O95371 312 aa10.65□□□□□ -0.7
BEST1-208ENST00000534553 SAA4P35542 130 aa10.65□□□□□ -0.7
BEST1-208ENST00000534553 MFAP2P55001 183 aa10.65□□□□□ -0.7
BEST1-208ENST00000534553 OR4X1Q8NH49 305 aa10.65□□□□□ -0.7
BEST1-208ENST00000534553 ARPC1AQ92747 370 aa10.65□□□□□ -0.7
BEST1-208ENST00000534553 IGHV4-61A0A0C4DH41 118 aa10.65□□□□□ -0.71
BEST1-208ENST00000534553 PSMB11A5LHX3 300 aa10.65□□□□□ -0.71
BEST1-208ENST00000534553 SLC25A16P16260 332 aa10.65□□□□□ -0.71
BEST1-208ENST00000534553 GATA3P23771 443 aa10.65□□□□□ -0.71
BEST1-208ENST00000534553 C10orf113Q5VZT2 155 aa10.65□□□□□ -0.71
BEST1-208ENST00000534553 MIR17HGQ75NE6 70 aa10.65□□□□□ -0.71
BEST1-208ENST00000534553 DYNAPQ8N1N2 210 aa10.65□□□□□ -0.71
BEST1-208ENST00000534553 RPUSD4Q96CM3 377 aaKnown RBP10.65□□□□□ -0.71
BEST1-208ENST00000534553 WNT10AQ9GZT5 417 aa10.65□□□□□ -0.71
BEST1-208ENST00000534553 THYN1Q9P016 225 aa10.65□□□□□ -0.71
BEST1-208ENST00000534553 EPG5Q9HCE0 2579 aa10.64□□□□□ -0.71
BEST1-208ENST00000534553 NCBP2LA6PVI3 153 aaKnown RBP10.64□□□□□ -0.71
BEST1-208ENST00000534553 OR7C2O60412 319 aa10.64□□□□□ -0.71
BEST1-208ENST00000534553 HLA-DRB1P01911 266 aa10.64□□□□□ -0.71
BEST1-208ENST00000534553 AKR1C3P42330 323 aa10.64□□□□□ -0.71
BEST1-208ENST00000534553 PLP1P60201 277 aa10.64□□□□□ -0.71
BEST1-208ENST00000534553 FLI1Q01543 452 aaPredicted RBP10.64□□□□□ -0.71
BEST1-208ENST00000534553 SPATA31B1PQ5VZV4 182 aa10.64□□□□□ -0.71
BEST1-208ENST00000534553 TMEM37Q8WXS4 190 aa10.64□□□□□ -0.71
BEST1-208ENST00000534553 CENPVL3A0A0U1RRI6 287 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 A0A1W2PRE2 83 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 I3L2K1 104 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 SCGB2A1O75556 95 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 GATA2P23769 480 aaPredicted RBP10.63□□□□□ -0.71
BEST1-208ENST00000534553 UBE2G2P60604 165 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 CX3CL1P78423 397 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 ZNF674Q2M3X9 581 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 TTC9CQ8N5M4 171 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 TMEM190Q8WZ59 177 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 C11orf52Q96A22 123 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 PERPQ96FX8 193 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 MLXQ9UH92 298 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 TRAV30A0A087WSZ9 112 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 CLDN34H7C241 214 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 ATP5G3P48201 142 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 S100A7AQ86SG5 101 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 HIST1H2BAQ96A08 127 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 TMEM68Q96MH6 324 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 ZNF48Q96MX3 618 aaPredicted RBP10.63□□□□□ -0.71
BEST1-208ENST00000534553 RASL11BQ9BPW5 248 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 TCEAL7Q9BRU2 100 aa10.63□□□□□ -0.71
BEST1-208ENST00000534553 IGHV4-30-2A0A087WSY4 118 aa10.62□□□□□ -0.71
BEST1-208ENST00000534553 IGHV1-69DA0A0B4J2H0 117 aa10.62□□□□□ -0.71
BEST1-208ENST00000534553 B4DSR2 109 aa10.62□□□□□ -0.71
BEST1-208ENST00000534553 IGHV1-69P01742 117 aa10.62□□□□□ -0.71
BEST1-208ENST00000534553 MSMBP08118 114 aa10.62□□□□□ -0.71
BEST1-208ENST00000534553 CD24P25063 80 aa10.62□□□□□ -0.71
BEST1-208ENST00000534553 ZNF90Q03938 601 aa10.62□□□□□ -0.71
BEST1-208ENST00000534553 ANAPC16Q96DE5 110 aa10.62□□□□□ -0.71
BEST1-208ENST00000534553 AJUBAQ96IF1 538 aa10.62□□□□□ -0.71
BEST1-208ENST00000534553 MRPL36Q9P0J6 103 aaKnown RBP10.62□□□□□ -0.71
BEST1-208ENST00000534553 USP9XQ93008 2570 aaPredicted RBP10.61□□□□□ -0.71
BEST1-208ENST00000534553 LOC105371267A0A1B0GV96 52 aa10.61□□□□□ -0.71
BEST1-208ENST00000534553 IGLC1P0CG04 106 aa10.61□□□□□ -0.71
BEST1-208ENST00000534553 APELAP0DMC3 54 aa10.61□□□□□ -0.71
BEST1-208ENST00000534553 CD99P14209 185 aa10.61□□□□□ -0.71
BEST1-208ENST00000534553 HIST1H1BP16401 226 aaKnown RBP10.61□□□□□ -0.71
BEST1-208ENST00000534553 RPL23P62829 140 aaKnown RBP10.61□□□□□ -0.71
BEST1-208ENST00000534553 ADIRFQ15847 76 aa10.61□□□□□ -0.71
BEST1-208ENST00000534553 Q8N9W7 124 aa10.61□□□□□ -0.71
BEST1-208ENST00000534553 ISOC2Q96AB3 205 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms