RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 A0A1W2PS18 150 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 LYRM9A8MSI8 78 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 OGG1O15527 345 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 GNG7O60262 68 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 CLN5O75503 358 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 LALBAP00709 142 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 IGKV3-20P01619 116 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 ATP5G1P05496 136 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 TRAPPC2P0DI81 140 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 TRAPPC2BP0DI82 140 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 P2RY1P47900 373 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 ATP5G3P48201 142 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 MFAP4P55083 255 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 TMEM50BP56557 158 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 QRFPP83859 136 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 RBM48Q5RL73 367 aaKnown RBP4.4□□□□□ -1.71
CD44-237ENST00000534082 HSD17B13Q7Z5P4 300 aaPredicted RBP4.4□□□□□ -1.71
CD44-237ENST00000534082 SLC51BQ86UW2 128 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 OR4C16Q8NGL9 310 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 SLC25A46Q96AG3 418 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 PGLYRP3Q96LB9 341 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 HSD17B10Q99714 261 aaKnown RBP4.4□□□□□ -1.71
CD44-237ENST00000534082 BCL7BQ9BQE9 202 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 C7orf50Q9BRJ6 194 aaKnown RBP4.4□□□□□ -1.71
CD44-237ENST00000534082 URM1Q9BTM9 101 aaKnown RBP4.4□□□□□ -1.71
CD44-237ENST00000534082 PECRQ9BY49 303 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 AMBNQ9NP70 447 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 FAM30AQ9NZY2 134 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 SPATA2Q9UM82 520 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 OAZ3Q9UMX2 235 aa4.4□□□□□ -1.71
CD44-237ENST00000534082 TCRBV3S1A0A5B6 114 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 FAM90A26D6RGX4 464 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 I3L2K1 104 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 UPK2O00526 184 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 IGLV2-14P01704 120 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 IGHV3-48P01763 117 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 CDK1P06493 297 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 FGF2P09038 288 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 MAPK3P27361 379 aaPredicted RBP4.39□□□□□ -1.71
CD44-237ENST00000534082 DCKP27707 260 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 KRTAP10-4P60372 401 aaPredicted RBP4.39□□□□□ -1.71
CD44-237ENST00000534082 SNRPD3P62318 126 aaKnown RBP4.39□□□□□ -1.71
CD44-237ENST00000534082 EIF4EBP1Q13541 118 aaPredicted RBP4.39□□□□□ -1.71
CD44-237ENST00000534082 FLOT2Q14254 428 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 ESRGQ1W209 222 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 PLAC9Q5JTB6 97 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 C1orf100Q5SVJ3 147 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 GDF5OSQ5U4N7 250 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 TMPRSS11AQ6ZMR5 421 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 NFE4Q86UQ8 179 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 C1orf158Q8N1D5 194 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 FAM89BQ8N5H3 189 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 ZFP41Q8N8Y5 198 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 ZNF709Q8N972 641 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 ZNF114Q8NC26 417 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 ENKURQ8TC29 256 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 LSM10Q969L4 123 aaKnown RBP4.39□□□□□ -1.71
CD44-237ENST00000534082 GPHA2Q96T91 129 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 TSC22D3Q99576 134 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 TXN2Q99757 166 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 C9orf16Q9BUW7 83 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 HINT2Q9BX68 163 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 TAS2R8Q9NYW2 309 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 CBY1Q9Y3M2 126 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 TNFRSF18Q9Y5U5 241 aa4.39□□□□□ -1.71
CD44-237ENST00000534082 IGKV1D-13A0A0B4J2D9 117 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 TEX50A0A1B0GTY4 177 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 A0A1B0GU03 582 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 SAC3D1A6NKF1 404 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 SLC22A5O76082 557 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 IGKV1-13P0DP09 117 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 NPPCP23582 126 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 HSPA13P48723 471 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 HOXA1P49639 335 aaPredicted RBP4.38□□□□□ -1.71
CD44-237ENST00000534082 EIF2B2P49770 351 aaKnown RBP4.38□□□□□ -1.71
CD44-237ENST00000534082 DEFB1P60022 68 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 COTL1Q14019 142 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 ACSM3Q53FZ2 586 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 AKAP14Q86UN6 197 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 SPAG16Q8N0X2 631 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 FCGR1BQ92637 280 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 GNPNAT1Q96EK6 184 aaPredicted RBP4.38□□□□□ -1.71
CD44-237ENST00000534082 METTL26Q96S19 204 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 SLC35B3Q9H1N7 401 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 DCSTAMPQ9H295 470 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 TMEM140Q9NV12 185 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 BABAM2Q9NXR7 383 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 OR2W1Q9Y3N9 320 aa4.38□□□□□ -1.71
CD44-237ENST00000534082 TRAV26-1A0A087WT03 109 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 PNMA8CA0A1B0GUJ8 204 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 CBY3A6NI87 242 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 SIVA1O15304 175 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 GAS8-AS1O95177 125 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 MT-CO2P00403 227 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 HLA-DQB1P01920 261 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 CD37P11049 281 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 GABRB1P18505 474 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 CRYBB3P26998 211 aa4.37□□□□□ -1.71
CD44-237ENST00000534082 NKX2-1P43699 371 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms