RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ANKRD55Q3KP44 614 aa7.11□□□□□ -1.27
SSBP3-215ENST00000533946 AARDQ4LEZ3 155 aa7.11□□□□□ -1.27
SSBP3-215ENST00000533946 THOC7Q6I9Y2 204 aaKnown RBP7.11□□□□□ -1.27
SSBP3-215ENST00000533946 RBPMS2Q6ZRY4 209 aaKnown RBP7.11□□□□□ -1.27
SSBP3-215ENST00000533946 HSD17B13Q7Z5P4 300 aaPredicted RBP7.11□□□□□ -1.27
SSBP3-215ENST00000533946 TMEM116Q8NCL8 245 aa7.11□□□□□ -1.27
SSBP3-215ENST00000533946 TSC22D3Q99576 134 aa7.11□□□□□ -1.27
SSBP3-215ENST00000533946 SDHCQ99643 169 aaPredicted RBP7.11□□□□□ -1.27
SSBP3-215ENST00000533946 MCUBQ9NWR8 336 aa7.11□□□□□ -1.27
SSBP3-215ENST00000533946 PUS1Q9Y606 427 aaKnown RBP eCLIP7.11□□□□□ -1.27
SSBP3-215ENST00000533946 TMEM56-RWDD3S4R434 201 aa7.11□□□□□ -1.27
SSBP3-215ENST00000533946 DISC1C4P0D8 188 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 K7EMT4 169 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 GNG7O60262 68 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 S100GP29377 79 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 DEFB1P60022 68 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 ERHP84090 104 aaKnown RBP7.1□□□□□ -1.27
SSBP3-215ENST00000533946 BAK1Q16611 211 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 DEFB135Q30KP9 77 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 LEMD1Q68G75 181 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 PRSS54Q6PEW0 395 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 SPSB3Q6PJ21 355 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 CCDC190Q86UF4 302 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 CCDC71LQ8N9Z2 235 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 RBPMSQ93062 196 aaKnown RBP7.1□□□□□ -1.27
SSBP3-215ENST00000533946 GGTLC1Q9BX51 225 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 PALMDQ9NP74 551 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 C14orf166Q9Y224 244 aaKnown RBP7.1□□□□□ -1.27
SSBP3-215ENST00000533946 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
SSBP3-215ENST00000533946 LOC102724200A0A096LPH7 203 aaPredicted RBP7.09□□□□□ -1.27
SSBP3-215ENST00000533946 TRAV14DV4A0A0A6YYC5 116 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 TRAV25A0A0B4J276 109 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 A0A0J9YWU9 116 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 LINC00854A0A1B0GVQ3 168 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 C15orf62A8K5M9 175 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 INS-IGF2F8WCM5 200 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 SNCAP37840 140 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 CCR6P51684 374 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 SSBP1Q04837 148 aaKnown RBP7.09□□□□□ -1.27
SSBP3-215ENST00000533946 PYDC2Q56P42 97 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 NMSQ5H8A3 153 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 TCF24Q7RTU0 167 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 SLC16A13Q7RTY0 426 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 STPG3Q8N7X2 389 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 RNASE11Q8TAA1 199 aaKnown RBP7.09□□□□□ -1.27
SSBP3-215ENST00000533946 MARC2Q969Z3 335 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 RRNAD1Q96FB5 475 aaKnown RBP7.09□□□□□ -1.27
SSBP3-215ENST00000533946 SPAG8Q99932 426 aaPredicted RBP7.09□□□□□ -1.27
SSBP3-215ENST00000533946 RBKSQ9H477 322 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 VSIRQ9H7M9 311 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 MAP6D1Q9H9H5 199 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.09□□□□□ -1.27
SSBP3-215ENST00000533946 FLVCR2Q9UPI3 526 aa7.09□□□□□ -1.27
SSBP3-215ENST00000533946 LCE6AA0A183 80 aa7.08□□□□□ -1.28
SSBP3-215ENST00000533946 CCDC160A6NGH7 325 aa7.08□□□□□ -1.28
SSBP3-215ENST00000533946 MPTX1A8MV57 137 aa7.08□□□□□ -1.28
SSBP3-215ENST00000533946 GIG44P09565 113 aaPredicted RBP7.08□□□□□ -1.28
SSBP3-215ENST00000533946 OPRK1P41145 380 aa7.08□□□□□ -1.28
SSBP3-215ENST00000533946 RND2P52198 227 aa7.08□□□□□ -1.28
SSBP3-215ENST00000533946 SPCS3P61009 180 aa7.08□□□□□ -1.28
SSBP3-215ENST00000533946 MRPS10P82664 201 aaKnown RBP7.08□□□□□ -1.28
SSBP3-215ENST00000533946 TMED4Q7Z7H5 227 aa7.08□□□□□ -1.28
SSBP3-215ENST00000533946 TXN2Q99757 166 aa7.08□□□□□ -1.28
SSBP3-215ENST00000533946 BCL7BQ9BQE9 202 aa7.08□□□□□ -1.28
SSBP3-215ENST00000533946 MS4A6AQ9H2W1 248 aa7.08□□□□□ -1.28
SSBP3-215ENST00000533946 HEYLQ9NQ87 328 aaPredicted RBP7.08□□□□□ -1.28
SSBP3-215ENST00000533946 DNAH2Q9P225 4427 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 IGKV1D-37A0A075B6S9 117 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 KNCNA6PVL3 124 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 CEBPZOSA8MTT3 80 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 DEFB4AO15263 64 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 CLN5O75503 358 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 IGLC1P0CG04 106 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 PRB4P10163 310 aaPredicted RBP7.07□□□□□ -1.28
SSBP3-215ENST00000533946 PPP1R1AQ13522 171 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 PMS2P11Q13670 270 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 SURF2Q15527 256 aaPredicted RBP7.07□□□□□ -1.28
SSBP3-215ENST00000533946 USF2Q15853 346 aaPredicted RBP7.07□□□□□ -1.28
SSBP3-215ENST00000533946 ZNF600Q6ZNG1 722 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 DUSP18Q8NEJ0 188 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 OR4X1Q8NH49 305 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 C15orf40Q8WUR7 153 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 NPIPB3Q92617 1050 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 GALNT14Q96FL9 552 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 PRRT1Q99946 306 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 SRRQ9GZT4 340 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 MAGT1Q9H0U3 335 aa7.07□□□□□ -1.28
SSBP3-215ENST00000533946 RSL24D1Q9UHA3 163 aaKnown RBP7.07□□□□□ -1.28
SSBP3-215ENST00000533946 CYB5BO43169 146 aa7.06□□□□□ -1.28
SSBP3-215ENST00000533946 PITX3O75364 302 aa7.06□□□□□ -1.28
SSBP3-215ENST00000533946 SULT1A3P0DMM9 295 aa7.06□□□□□ -1.28
SSBP3-215ENST00000533946 SULT1A4P0DMN0 295 aa7.06□□□□□ -1.28
SSBP3-215ENST00000533946 IAPPP10997 89 aa7.06□□□□□ -1.28
SSBP3-215ENST00000533946 BTCP35070 178 aa7.06□□□□□ -1.28
SSBP3-215ENST00000533946 DEFB131AP59861 70 aa7.06□□□□□ -1.28
SSBP3-215ENST00000533946 DHODHQ02127 395 aa7.06□□□□□ -1.28
SSBP3-215ENST00000533946 ZNF90Q03938 601 aa7.06□□□□□ -1.28
SSBP3-215ENST00000533946 RELQ04864 619 aaPredicted RBP7.06□□□□□ -1.28
SSBP3-215ENST00000533946 C2orf83Q53S99 150 aa7.06□□□□□ -1.28
SSBP3-215ENST00000533946 TMEM182Q6ZP80 229 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms