RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 ZNF114Q8NC26 417 aa8.59□□□□□ -1.03
SVIP-205ENST00000533774 FCAMRQ8WWV6 532 aa8.59□□□□□ -1.03
SVIP-205ENST00000533774 TMEM56Q96MV1 263 aa8.59□□□□□ -1.03
SVIP-205ENST00000533774 TMEM231Q9H6L2 316 aa8.59□□□□□ -1.03
SVIP-205ENST00000533774 PTGES3LE9PB15 166 aa8.58□□□□□ -1.04
SVIP-205ENST00000533774 HSMCR30P0CW71 290 aa8.58□□□□□ -1.04
SVIP-205ENST00000533774 GNRHRP30968 328 aa8.58□□□□□ -1.04
SVIP-205ENST00000533774 ERVK-16P61578 105 aa8.58□□□□□ -1.04
SVIP-205ENST00000533774 C8orf59Q8N0T1 100 aaPredicted RBP8.58□□□□□ -1.04
SVIP-205ENST00000533774 YTHDF2Q9Y5A9 579 aaKnown RBP8.58□□□□□ -1.04
SVIP-205ENST00000533774 U3KQE9 123 aa8.58□□□□□ -1.04
SVIP-205ENST00000533774 A0A1W2PS18 150 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 SMIM30A4D0T7 59 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 FAM90A26D6RGX4 464 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 SNAPC5O75971 98 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 IGKV3-20P01619 116 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 FCER2P06734 321 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 BTF3P20290 206 aaKnown RBP8.57□□□□□ -1.04
SVIP-205ENST00000533774 F2RP25116 425 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 GNG2P59768 71 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 NUTF2P61970 127 aaKnown RBP8.57□□□□□ -1.04
SVIP-205ENST00000533774 DLK1P80370 383 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 TMEM17Q86X19 198 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 CADM3Q8N126 398 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 C1orf158Q8N1D5 194 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 BEST4Q8NFU0 473 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 GLMPQ8WWB7 406 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 METTL26Q96S19 204 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 PRNDQ9UKY0 176 aa8.57□□□□□ -1.04
SVIP-205ENST00000533774 TEX48A0A1B0GUV7 120 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 SMR3BP02814 79 aaPredicted RBP8.56□□□□□ -1.04
SVIP-205ENST00000533774 RLN1P04808 185 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 HLA-DRB4P13762 266 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 NPBWR1P48145 328 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 ARPC4P59998 168 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 DAD1P61803 113 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 ARL6IP1Q15041 203 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 TRAM1Q15629 374 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 MLANAQ16655 118 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 C16orf54Q6UWD8 224 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 ZNF709Q8N972 641 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 ANAPC16Q96DE5 110 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 HLA-DRB4X5D2U9 266 aa8.56□□□□□ -1.04
SVIP-205ENST00000533774 TRAV1-2A0A0B4J238 106 aa8.55□□□□□ -1.04
SVIP-205ENST00000533774 LOC102723971A0A1B0GUV8 181 aa8.55□□□□□ -1.04
SVIP-205ENST00000533774 RPS10-NUDT3A0A1W2PQS6 291 aa8.55□□□□□ -1.04
SVIP-205ENST00000533774 PGLYRP1O75594 196 aaPredicted RBP8.55□□□□□ -1.04
SVIP-205ENST00000533774 NUDT3O95989 172 aa8.55□□□□□ -1.04
SVIP-205ENST00000533774 PRM2P04554 102 aa8.55□□□□□ -1.04
SVIP-205ENST00000533774 RANBP1P43487 201 aa8.55□□□□□ -1.04
SVIP-205ENST00000533774 SPINK9Q5DT21 86 aa8.55□□□□□ -1.04
SVIP-205ENST00000533774 OGFRL1Q5TC84 451 aaPredicted RBP8.55□□□□□ -1.04
SVIP-205ENST00000533774 TPRA1Q86W33 373 aa8.55□□□□□ -1.04
SVIP-205ENST00000533774 FRZBQ92765 325 aa8.55□□□□□ -1.04
SVIP-205ENST00000533774 SLC35B3Q9H1N7 401 aa8.55□□□□□ -1.04
SVIP-205ENST00000533774 FNDC4Q9H6D8 234 aaPredicted RBP8.55□□□□□ -1.04
SVIP-205ENST00000533774 ERICH4A6NGS2 130 aa8.54□□□□□ -1.04
SVIP-205ENST00000533774 PDCD5O14737 125 aa8.54□□□□□ -1.04
SVIP-205ENST00000533774 IGKV1-17P01599 117 aa8.54□□□□□ -1.04
SVIP-205ENST00000533774 RAB3BP20337 219 aa8.54□□□□□ -1.04
SVIP-205ENST00000533774 PSMA1P25786 263 aaKnown RBP8.54□□□□□ -1.04
SVIP-205ENST00000533774 PRCDQ00LT1 54 aa8.54□□□□□ -1.04
SVIP-205ENST00000533774 MLLT11Q13015 90 aaPredicted RBP8.54□□□□□ -1.04
SVIP-205ENST00000533774 TIGITQ495A1 244 aa8.54□□□□□ -1.04
SVIP-205ENST00000533774 KCTD21Q4G0X4 260 aa8.54□□□□□ -1.04
SVIP-205ENST00000533774 GSG1LQ6UXU4 331 aa8.54□□□□□ -1.04
SVIP-205ENST00000533774 HOGA1Q86XE5 327 aa8.54□□□□□ -1.04
SVIP-205ENST00000533774 LGALS14Q8TCE9 139 aa8.54□□□□□ -1.04
SVIP-205ENST00000533774 Q9H8V8 135 aa8.54□□□□□ -1.04
SVIP-205ENST00000533774 FKBP11Q9NYL4 201 aa8.54□□□□□ -1.04
SVIP-205ENST00000533774 IGKV1-39P01597 117 aa8.53□□□□□ -1.04
SVIP-205ENST00000533774 IGKV1D-39P04432 117 aa8.53□□□□□ -1.04
SVIP-205ENST00000533774 KRTAP10-1P60331 282 aa8.53□□□□□ -1.04
SVIP-205ENST00000533774 SSX7Q7RTT5 188 aa8.53□□□□□ -1.04
SVIP-205ENST00000533774 RNF141Q8WVD5 230 aa8.53□□□□□ -1.04
SVIP-205ENST00000533774 SEC22AQ96IW7 307 aa8.53□□□□□ -1.04
SVIP-205ENST00000533774 ACOT13Q9NPJ3 140 aa8.53□□□□□ -1.04
SVIP-205ENST00000533774 CASQ2O14958 399 aaPredicted RBP8.52□□□□□ -1.05
SVIP-205ENST00000533774 CLN5O75503 358 aa8.52□□□□□ -1.05
SVIP-205ENST00000533774 CCL18P55774 89 aa8.52□□□□□ -1.05
SVIP-205ENST00000533774 HSPE1P61604 102 aaKnown RBP8.52□□□□□ -1.05
SVIP-205ENST00000533774 SNRPD3P62318 126 aaKnown RBP8.52□□□□□ -1.05
SVIP-205ENST00000533774 IZUMO4Q1ZYL8 232 aa8.52□□□□□ -1.05
SVIP-205ENST00000533774 Q6ZRN7 208 aaPredicted RBP8.52□□□□□ -1.05
SVIP-205ENST00000533774 PACRGLQ8N7B6 248 aa8.52□□□□□ -1.05
SVIP-205ENST00000533774 TMEM230Q96A57 120 aa8.52□□□□□ -1.05
SVIP-205ENST00000533774 MGLLQ99685 303 aa8.52□□□□□ -1.05
SVIP-205ENST00000533774 Q9H3A6 140 aa8.52□□□□□ -1.05
SVIP-205ENST00000533774 F5H768 121 aa8.51□□□□□ -1.05
SVIP-205ENST00000533774 HBE1P02100 147 aa8.51□□□□□ -1.05
SVIP-205ENST00000533774 RNASE2P10153 161 aaKnown RBP8.51□□□□□ -1.05
SVIP-205ENST00000533774 NKX2-1P43699 371 aaPredicted RBP8.51□□□□□ -1.05
SVIP-205ENST00000533774 FCN2Q15485 313 aa8.51□□□□□ -1.05
SVIP-205ENST00000533774 TSC22D3Q99576 134 aa8.51□□□□□ -1.05
SVIP-205ENST00000533774 SEPSECSQ9HD40 501 aaKnown RBP8.51□□□□□ -1.05
SVIP-205ENST00000533774 NRN1Q9NPD7 142 aa8.51□□□□□ -1.05
SVIP-205ENST00000533774 LRP1Q07954 4544 aaKnown RBP8.5□□□□□ -1.05
SVIP-205ENST00000533774 DNAH8Q96JB1 4490 aa8.5□□□□□ -1.05
SVIP-205ENST00000533774 MEIS3P1A6NDR6 274 aa8.5□□□□□ -1.05
SVIP-205ENST00000533774 HNRNPCP07910 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms