RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 IGHG3P01860 377 aa14.53□□□□□ -0.08
PHRF1-205ENST00000533464 THBDP07204 575 aa14.53□□□□□ -0.08
PHRF1-205ENST00000533464 TREML4Q6UXN2 200 aa14.53□□□□□ -0.08
PHRF1-205ENST00000533464 HEPN1Q6WQI6 88 aa14.53□□□□□ -0.08
PHRF1-205ENST00000533464 FANCMQ8IYD8 2048 aa14.53□□□□□ -0.08
PHRF1-205ENST00000533464 A0A1B0GUT8 65 aa14.52□□□□□ -0.08
PHRF1-205ENST00000533464 SLC25A34Q6PIV7 304 aa14.52□□□□□ -0.08
PHRF1-205ENST00000533464 TMEM136Q6ZRR5 245 aa14.52□□□□□ -0.08
PHRF1-205ENST00000533464 ATG101Q9BSB4 218 aa14.52□□□□□ -0.08
PHRF1-205ENST00000533464 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.52□□□□□ -0.082e-7■■■■□ 23.9
PHRF1-205ENST00000533464 GNG5P63218 68 aa14.52□□□□□ -0.08
PHRF1-205ENST00000533464 FAM159AQ6UWV7 190 aa14.52□□□□□ -0.08
PHRF1-205ENST00000533464 FMC1Q96HJ9 113 aa14.52□□□□□ -0.08
PHRF1-205ENST00000533464 RPP21Q9H633 154 aaKnown RBP14.52□□□□□ -0.08
PHRF1-205ENST00000533464 TSPOP30536 169 aa14.52□□□□□ -0.09
PHRF1-205ENST00000533464 UQCRFS1P47985 274 aa14.52□□□□□ -0.09
PHRF1-205ENST00000533464 TCRBV4S1A1TA0A5B7 111 aa14.52□□□□□ -0.09
PHRF1-205ENST00000533464 MBD3L4A6NDZ8 208 aaPredicted RBP14.52□□□□□ -0.09
PHRF1-205ENST00000533464 MBD3L3A6NE82 208 aaPredicted RBP14.52□□□□□ -0.09
PHRF1-205ENST00000533464 MBD3L5A6NJ08 208 aaPredicted RBP14.52□□□□□ -0.09
PHRF1-205ENST00000533464 MBD3L2Q8NHZ7 208 aaPredicted RBP14.52□□□□□ -0.09
PHRF1-205ENST00000533464 NPIPB6E9PJ23 425 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 ZNF672Q499Z4 452 aaPredicted RBP14.51□□□□□ -0.09
PHRF1-205ENST00000533464 RFNGQ9Y644 331 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 DOCK9Q9BZ29 2069 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 TRBV6-6A0A0A6YYG2 114 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 A0A0G2JLM5 398 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 MLNRO43193 412 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 RAX2Q96IS3 184 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 KCNS1Q96KK3 526 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 LOC105371267A0A1B0GV96 52 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 DPRXA6NFQ7 191 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 COQ2Q96H96 371 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 TGFAP01135 160 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 IGHV3-11P01762 117 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 PET117Q6UWS5 81 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 C12orf54Q6X4T0 127 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 DUX5Q96PT3 197 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 ANAPC1Q9H1A4 1944 aa14.51□□□□□ -0.09
PHRF1-205ENST00000533464 HOXA5P20719 270 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 ASCL4Q6XD76 172 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 HS3ST6Q96QI5 342 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 HIGD1CA8MV81 97 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 TMEM200BQ69YZ2 307 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 C20orf204Q6ZNR8 217 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 Q6ZS92 163 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 A0A1W2PRE2 83 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 RNF125Q96EQ8 232 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 A0A0G2JNJ9 132 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 ZNF324O75467 553 aaPredicted RBP14.5□□□□□ -0.09
PHRF1-205ENST00000533464 OCC1Q8TAD7 63 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 GGTLC1Q9BX51 225 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 Q9UFV3 132 aa14.5□□□□□ -0.09
PHRF1-205ENST00000533464 TBL2Q9Y4P3 447 aaKnown RBP14.5□□□□□ -0.09
PHRF1-205ENST00000533464 C19orf67A6NJJ6 358 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 M0R381 172 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 RRN3P1Q2M238 152 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 PROK2Q9HC23 129 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 ZFHX2Q9C0A1 2572 aaPredicted RBP14.49□□□□□ -0.09
PHRF1-205ENST00000533464 TMEM178BH3BS89 294 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 ZNF474Q6S9Z5 364 aaPredicted RBP14.49□□□□□ -0.09
PHRF1-205ENST00000533464 TCF23Q7RTU1 214 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 RPP25LQ8N5L8 163 aaKnown RBP14.49□□□□□ -0.09
PHRF1-205ENST00000533464 CFPP27918 469 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 LINC00205P59089 165 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 CIARTQ8N365 385 aaPredicted RBP14.49□□□□□ -0.09
PHRF1-205ENST00000533464 TNFRSF14Q92956 283 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 SHANK1Q9Y566 2161 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 TRAV3A0A0B4J244 114 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 LINC00473A8K010 186 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 TCF21O43680 179 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 ZMAT5Q9UDW3 170 aaKnown RBP14.49□□□□□ -0.09
PHRF1-205ENST00000533464 SMAD7O15105 426 aaKnown RBP14.49□□□□□ -0.09
PHRF1-205ENST00000533464 PRELID3AQ96N28 172 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 TMEM70Q9BUB7 260 aa14.49□□□□□ -0.09
PHRF1-205ENST00000533464 CIDEAO60543 219 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 HERPUD1Q15011 391 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 TMEM14EPQ6UXP3 125 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 OTORQ9NRC9 128 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 ZNF257Q9Y2Q1 563 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 TRAV9-1A0A075B6T8 112 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 FBLL1A6NHQ2 334 aaKnown RBP14.48□□□□□ -0.09
PHRF1-205ENST00000533464 EPDR1Q9UM22 224 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 IGKV1D-17A0A075B6S4 117 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 C7orf71A4D174 169 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 ZNF56Q15929 161 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 PVRIGQ6DKI7 326 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 Q6ZS49 121 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 IGHV2-26A0A0B4J1V2 119 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 IZUMO1RA6ND01 250 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 C9JCJ5 164 aa14.48□□□□□ -0.09
PHRF1-205ENST00000533464 IGHV1-8P0DP01 117 aa14.47□□□□□ -0.09
PHRF1-205ENST00000533464 GCSHP23434 173 aa14.47□□□□□ -0.09
PHRF1-205ENST00000533464 SRSF4Q08170 494 aaKnown RBP14.47□□□□□ -0.09
PHRF1-205ENST00000533464 COLCA1Q6ZS62 124 aa14.47□□□□□ -0.09
PHRF1-205ENST00000533464 PLXNA4Q9HCM2 1894 aa14.47□□□□□ -0.09
PHRF1-205ENST00000533464 FAM19A2Q8N3H0 131 aa14.47□□□□□ -0.09
PHRF1-205ENST00000533464 LOC102724200A0A096LPH7 203 aaPredicted RBP14.47□□□□□ -0.09
PHRF1-205ENST00000533464 REG4Q9BYZ8 158 aa14.47□□□□□ -0.09
PHRF1-205ENST00000533464 A0A0G2JRQ6 117 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms