RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 LYG2Q86SG7 212 aa15.44■□□□□ 0.06
CCS-208ENST00000533244 UXS1Q8NBZ7 420 aa15.44■□□□□ 0.06
CCS-208ENST00000533244 DUSP18Q8NEJ0 188 aa15.44■□□□□ 0.06
CCS-208ENST00000533244 RBKSQ9H477 322 aa15.44■□□□□ 0.06
CCS-208ENST00000533244 COL7A1Q02388 2944 aa15.44■□□□□ 0.06
CCS-208ENST00000533244 GNG7O60262 68 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 NPBWR1P48145 328 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 RELQ04864 619 aaPredicted RBP15.43■□□□□ 0.06
CCS-208ENST00000533244 OR1S1Q8NH92 325 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 RNASEH2CQ8TDP1 164 aaKnown RBP15.43■□□□□ 0.06
CCS-208ENST00000533244 DTD1Q8TEA8 209 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 C20orf85Q9H1P6 137 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 HIPK2Q9H2X6 1198 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 DAZ1Q9NQZ3 744 aaKnown RBP15.43■□□□□ 0.06
CCS-208ENST00000533244 MRPL36Q9P0J6 103 aaKnown RBP15.43■□□□□ 0.06
CCS-208ENST00000533244 MRPL27Q9P0M9 148 aaKnown RBP15.43■□□□□ 0.06
CCS-208ENST00000533244 MLXQ9UH92 298 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 ZNF785A8K8V0 405 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 FAM90A26D6RGX4 464 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 K7EMT4 169 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 NPY1RP25929 384 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 OPRK1P41145 380 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 GGNBP1Q5YKI7 109 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 OR4X1Q8NH49 305 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 WDR12Q9GZL7 423 aaKnown RBP15.43■□□□□ 0.06
CCS-208ENST00000533244 TBC1D24Q9ULP9 559 aa15.43■□□□□ 0.06
CCS-208ENST00000533244 C15orf62A8K5M9 175 aa15.42■□□□□ 0.06
CCS-208ENST00000533244 TMEM50AO95807 157 aa15.42■□□□□ 0.06
CCS-208ENST00000533244 TCRBP04435 133 aa15.42■□□□□ 0.06
CCS-208ENST00000533244 HOXB5P09067 269 aa15.42■□□□□ 0.06
CCS-208ENST00000533244 ZNF846Q147U1 533 aa15.42■□□□□ 0.06
CCS-208ENST00000533244 MLANAQ16655 118 aa15.42■□□□□ 0.06
CCS-208ENST00000533244 OR10C1Q96KK4 312 aa15.42■□□□□ 0.06
CCS-208ENST00000533244 U3KQ87 197 aa15.42■□□□□ 0.06
CCS-208ENST00000533244 CD69Q07108 199 aa15.41■□□□□ 0.06
CCS-208ENST00000533244 BTNL8Q6UX41 500 aa15.41■□□□□ 0.06
CCS-208ENST00000533244 NOXA1Q86UR1 476 aa15.41■□□□□ 0.06
CCS-208ENST00000533244 TMEM61Q8N0U2 210 aa15.41■□□□□ 0.06
CCS-208ENST00000533244 COQ8AQ8NI60 647 aa15.41■□□□□ 0.06
CCS-208ENST00000533244 RPS10-NUDT3A0A1W2PQS6 291 aa15.4■□□□□ 0.06
CCS-208ENST00000533244 CLN5O75503 358 aa15.4■□□□□ 0.06
CCS-208ENST00000533244 ADAP1O75689 374 aa15.4■□□□□ 0.06
CCS-208ENST00000533244 ATP5IP56385 69 aaPredicted RBP15.4■□□□□ 0.06
CCS-208ENST00000533244 ASAH1Q13510 395 aa15.4■□□□□ 0.06
CCS-208ENST00000533244 C4orf46Q504U0 113 aa15.4■□□□□ 0.06
CCS-208ENST00000533244 A8MZ25 164 aa15.39■□□□□ 0.05
CCS-208ENST00000533244 UPK1BO75841 260 aa15.39■□□□□ 0.05
CCS-208ENST00000533244 MITD1Q8WV92 249 aa15.39■□□□□ 0.05
CCS-208ENST00000533244 WDR89Q96FK6 387 aaPredicted RBP15.39■□□□□ 0.05
CCS-208ENST00000533244 C20orf24Q9BUV8 137 aa15.39■□□□□ 0.05
CCS-208ENST00000533244 IGHV3OR16-8A0A075B7F1 116 aa15.38■□□□□ 0.05
CCS-208ENST00000533244 MPTX1A8MV57 137 aa15.38■□□□□ 0.05
CCS-208ENST00000533244 IFNA10P01566 189 aa15.38■□□□□ 0.05
CCS-208ENST00000533244 SLC25A4P12235 298 aa15.38■□□□□ 0.05
CCS-208ENST00000533244 PRSS54Q6PEW0 395 aa15.38■□□□□ 0.05
CCS-208ENST00000533244 ZNF600Q6ZNG1 722 aa15.38■□□□□ 0.05
CCS-208ENST00000533244 TMEM116Q8NCL8 245 aa15.38■□□□□ 0.05
CCS-208ENST00000533244 NUDT15Q9NV35 164 aa15.38■□□□□ 0.05
CCS-208ENST00000533244 TRAV25A0A0B4J276 109 aa15.37■□□□□ 0.05
CCS-208ENST00000533244 IGHV4-30-4P0DP06 118 aa15.37■□□□□ 0.05
CCS-208ENST00000533244 TOMM20LQ6UXN7 152 aa15.37■□□□□ 0.05
CCS-208ENST00000533244 GTSCR1Q86UQ5 136 aa15.37■□□□□ 0.05
CCS-208ENST00000533244 OR52B4Q8NGK2 314 aa15.37■□□□□ 0.05
CCS-208ENST00000533244 ZFAND3Q9H8U3 227 aa15.37■□□□□ 0.05
CCS-208ENST00000533244 C19orf73Q9NVV2 129 aa15.37■□□□□ 0.05
CCS-208ENST00000533244 SELENOKQ9Y6D0 94 aa15.37■□□□□ 0.05
CCS-208ENST00000533244 TRAV6A0A075B6T7 132 aa15.36■□□□□ 0.05
CCS-208ENST00000533244 ZNF207O43670 478 aaKnown RBP15.36■□□□□ 0.05
CCS-208ENST00000533244 MED6O75586 246 aa15.36■□□□□ 0.05
CCS-208ENST00000533244 IGKV1-17P01599 117 aa15.36■□□□□ 0.05
CCS-208ENST00000533244 FRMD6-AS1P0C7T7 363 aa15.36■□□□□ 0.05
CCS-208ENST00000533244 IGLC1P0CG04 106 aa15.36■□□□□ 0.05
CCS-208ENST00000533244 IFITM3Q01628 133 aa15.36■□□□□ 0.05
CCS-208ENST00000533244 ETFRF1Q6IPR1 90 aa15.36■□□□□ 0.05
CCS-208ENST00000533244 SMPXQ9UHP9 88 aa15.36■□□□□ 0.05
CCS-208ENST00000533244 PUS1Q9Y606 427 aaKnown RBP eCLIP15.36■□□□□ 0.05
CCS-208ENST00000533244 TRAV30A0A087WSZ9 112 aa15.35■□□□□ 0.05
CCS-208ENST00000533244 IGHV7-4-1A0A0J9YVY3 117 aa15.35■□□□□ 0.05
CCS-208ENST00000533244 SYNGR2O43760 224 aa15.35■□□□□ 0.05
CCS-208ENST00000533244 YIF1AO95070 293 aa15.35■□□□□ 0.05
CCS-208ENST00000533244 IFNA21P01568 189 aa15.35■□□□□ 0.05
CCS-208ENST00000533244 RND2P52198 227 aa15.35■□□□□ 0.05
CCS-208ENST00000533244 ID3Q02535 119 aa15.35■□□□□ 0.05
CCS-208ENST00000533244 MZT2BQ6NZ67 158 aa15.35■□□□□ 0.05
CCS-208ENST00000533244 OR4D5Q8NGN0 318 aa15.35■□□□□ 0.05
CCS-208ENST00000533244 CIB3Q96Q77 187 aaPredicted RBP15.35■□□□□ 0.05
CCS-208ENST00000533244 FAM240BA0A1B0GVZ2 78 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 SCGB2A1O75556 95 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 CD7P09564 240 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 NHLRC4P0CG21 123 aaPredicted RBP15.34■□□□□ 0.05
CCS-208ENST00000533244 IAPPP10997 89 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 CD81P60033 236 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 GUCA2BQ16661 112 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 SLC16A13Q7RTY0 426 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 NEURL2Q9BR09 285 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 MAGT1Q9H0U3 335 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 CHEK1O14757 476 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 TSPAN4O14817 238 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 H2AFB2P0C5Z0 115 aa15.34■□□□□ 0.05
CCS-208ENST00000533244 OR1S2Q8NGQ3 325 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms